Basic Information

Insect: Acanthococcus lagerstroemiae
Gene Symbol: CDX
Assembly: GCA_031841125.1
Location: CM063110.1:13871841-13887151[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0037 0.6 11.7 5.0 3 23 338 358 337 358 0.96

2 15 0.035 5.6 8.6 3.4 3 23 425 445 424 445 0.96

3 15 0.068 11 7.7 0.4 8 23 810 826 803 826 0.83

4 15 0.036 5.7 8.6 0.1 1 23 966 988 966 988 0.95

5 15 0.0021 0.34 12.5 4.5 1 23 1010 1032 1010 1032 0.97

6 15 0.0014 0.23 13.0 0.5 1 20 1085 1104 1085 1106 0.92

7 15 0.00052 0.083 14.4 2.6 1 23 1113 1136 1113 1136 0.97

8 15 6.9e-05 0.011 17.1 0.9 1 23 1294 1316 1294 1316 0.96

9 15 0.00038 0.061 14.8 3.2 1 23 1321 1343 1321 1343 0.97

10 15 0.00056 0.09 14.3 0.7 1 21 1347 1367 1347 1368 0.95

11 15 0.00023 0.037 15.5 1.7 2 23 1376 1399 1375 1399 0.89

12 15 5.8e-05 0.0094 17.4 1.5 1 23 1405 1428 1405 1428 0.96

13 15 0.012 1.9 10.1 1.8 1 23 1433 1455 1433 1455 0.95

14 15 1.6 2.6e+02 3.4 0.4 6 17 1466 1477 1464 1478 0.90

15 15 0.0022 0.36 12.4 3.9 1 23 1500 1523 1500 1523 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0037	0.6	11.7	5.0	3	23	338	358	337	358	0.96
2	15	0.035	5.6	8.6	3.4	3	23	425	445	424	445	0.96
3	15	0.068	11	7.7	0.4	8	23	810	826	803	826	0.83
4	15	0.036	5.7	8.6	0.1	1	23	966	988	966	988	0.95
5	15	0.0021	0.34	12.5	4.5	1	23	1010	1032	1010	1032	0.97
6	15	0.0014	0.23	13.0	0.5	1	20	1085	1104	1085	1106	0.92
7	15	0.00052	0.083	14.4	2.6	1	23	1113	1136	1113	1136	0.97
8	15	6.9e-05	0.011	17.1	0.9	1	23	1294	1316	1294	1316	0.96
9	15	0.00038	0.061	14.8	3.2	1	23	1321	1343	1321	1343	0.97
10	15	0.00056	0.09	14.3	0.7	1	21	1347	1367	1347	1368	0.95
11	15	0.00023	0.037	15.5	1.7	2	23	1376	1399	1375	1399	0.89
12	15	5.8e-05	0.0094	17.4	1.5	1	23	1405	1428	1405	1428	0.96
13	15	0.012	1.9	10.1	1.8	1	23	1433	1455	1433	1455	0.95
14	15	1.6	2.6e+02	3.4	0.4	6	17	1466	1477	1464	1478	0.90
15	15	0.0022	0.36	12.4	3.9	1	23	1500	1523	1500	1523	0.95

Sequence Information

Coding Sequence: ATGATCAACCACGCGAATCGGCCAAGTTATTTCAAGGTAAGAGCCATGGATGCTGATCAATCGGTCCACGCTGATGCTTCAACACGCTCCATCGCAGCGTCACAATGTCGCTATAAGGGATCCATCTCATATAGCGATATTTTATCACGACACGGTCAGACCGGCCCATTTTTGACTATCTGGACCGAGGCCAGCGGGCATTTACCTAGAAACTGCTGCTCAGTAACGCCTGCTACGTATATTCCTGCTGAATCAGCTAAATCCCCACCTCATgaaattgaaaatgattctcGCAATATTTACATTACCAACGGCAATCCGATTCGGAATTATTTTAATCGTGGGCCAACCGTGACTGTTAAAATTGATGCAGTGAGAAAGCTAAAACGAAACACTCACAAATGGTTTCTGCCTCCTAGCACTCTCAGACAGCCCGTGTGCGTAAAACAGTCCTCGAATTCTGAGGAATATTTGTTGCCACATTCTTTGGCAGAATCCGAAACAAACAGTTTTGATTTGatcgaaaaaaattcgaattttgatcgCCTCGGTTCTGAAAAAAATGGAGCTACAGAAGTTGAAGTGGCTAATGCAAAACAAAGCGGTGAGCAACTGAGTCCACGTACTGGCACTATCGGTCAGCCATTGAGGGTAAAACAAAACTTGAATTCTGAAGCGTATGTATTGCCCGTCCTAGGCCAGGTTCTGAGTGGAAAACAAAAGTTAAATTCTGAGGAGTATTTGTTACCACATTCTTTTGATGCACCAGAAACGAACTACAACAATTTCGACTTTGGAGAAAATGATGAGGAAGTTGATCCTTCCCTATATGAAGAAGCTACAAATAGTGAAATATGCCTGCGTCCCAACATTCTCCGGCTATTGAACGAACAGAACTTGAATTCGGGGAAGTGTGTGTTACCACATCCATTCAAAGCTCCAGTTACAAACATCAGTGCCAATCCGGTGAAGAACTGGAAGTTACTCGTCAGTTCTGAGAAGATAAATTGTTGTTCAACTTGCGGGAAAACATTCGAGGATGAAGATTGCTTTCGAAAACATTTGTTGGAACATGTTAGAAAAGTAACACGTATCAAAGTGAGACGTCCCTGTTCCGCAAATGGTGCTAAATTGGCCTGGAAGGCGAACAGTGAAGAATTCCGTGCCagcaaagttgatttttttcatcttgaCGCAAGTAAAACTACAGACATCAATACCAAACCCGTGAAGAAGTTGAAGTTGGCTGTCAATCCGGTGAAGGTAAATTGCTGTTCTAAATGCCGAAAGTCATTTGAGGATGAAGACCGCTTCCAACAACATTTATTGGAACATTTAAACGAAGAGTCACGttccaattccaaaaatgaCGCTGAATTGGCCTGGAATGCGAGCAGTGAAGAATTCCAAGACACCAGAAAACAGGGTTCTGAAAATGAACAAGCTGTAAGGGGTACTAGCACTGTGAAATTTCTACGAGGTCGCGTTCCCTTTCATCAGTATTACAATAACATTCAAGTAAATACACGTGCCCATGCTGCTAATGAAAACCGGAATGTTTTTATTATCCGCGGCCCTCCTACCGCCAGTGAACACGAAGAGCTAACTGTTGATACGGCAGATGGTGAAGATTCAAGAGAACTGTTATCCGACCATTgtaattcgaaaaaagaaacgagaatCTGCAAAACTGACGTAAAAAGAACAGATAGTACAGTGTCCAGCAGTGAGCCAGCATCTGTATTCGGCGAAGAGGAACCGTTTTCTGAAGTTAAAGATGCCCAATACATTCAAGAGGATTATGAAACTGTCTACGTGTTTCCGGTTCGAACTTTGATGGAAGAACAGGATGCGGACAATCATTCCGAAGTAAATGTCAAACAGAAGACTGATACGAAAACAAGCTACACTTCCTGCGCCAAAGAAATCGACGAAGAGACGCAGCAGCACACAACGAGCAGCCATAAGTGTTTCGTCGAAACTGCGAATTCAGAAAACCGCAAAATTGTCAGTTATGAAGAAACGTGCACAACAGCTGATAGCTGCCCCGACCAAGACAGTACCGAAATGCTGCGTCTGTTTTTGGTTGACTCGCCACCTTCGACCAGAAAATCCAGTTCGACGGATATAGCTAACGTACAATTTGAAGATCCAGCTATCAAAGTGTTCGACGGAGAGAAACATGCTCCTGCAATTTCCGAAGAAGAacgtatttcgaaaaatataacCGAACTATGCGATGAGCTAGAAACTCAAGAGATTTTCGATTCTTTCCTCGCAGAATACGAAGAAGAGTGTAATCTACCCAAGAACACTGATCACTCGTATGCATTTTCACTAGATGAAGAATATGCATGTAGTGACATTTCCGCTACCGTCAATTCagaaacagaaattgaaacgGTATTTGTATGTCCTTACATGTGTAGGTCCTTCAAGACTGCATACGGTTTGAATAGACATATATTATCTTCTcacaaaaaccacaaagaaCGTGTGAATGTGAGTAGCCTGGATAGTATAGACGCTACCATCGAAGAATGCATAAAAGCTTTCAGTGAAGACAAGATGAGTGCTAGTGATGAAACAGATATAGAAGCTAGCAGTGCTAAAACTGGCAACGTTTCATCCAGATTAAAAATGACGAAGTACCAGCGCGAAGCATTACTGTGTTTATACAAAAGTAATCCGTATCCTGATACGTCCAGCAAGAGTGATTTAGCTGCGAAGTTAGACTTGACCCTCCACAGAATCTCAGTGTGGTTCCAAAACAAAAGAGCGTTCGAGAGAAAATGTGGCCGGCTCCCTCCATTGTCTAACCAGACAAATATTGAAACCACCGAAATGAGTCAACCTGAAACCGAATGCGACTTTTTGGTAGACGCCGACGAAATGTTCTTGTGCGCCATTTGTAATGATACTTTCGTGAACGAAGAAGATTTGGATGACCATCTGTTAACTCACGAAGCTGCAAGAGTTCTAAATAGTAACGTCATCCGCGAACCAAAGAAATCCGATAAAGAATTGTATTTCTGCGCCATATGCCATCAGTTTTTCACTCGAAAACAGAAGATCAGAAAACATATGTCCATTCATGTGGGTGTCGATAGGAACGCTAATGGTAGTGActcagatttaaaaaatgatggtGTGCACGACTTACCAAACTGTGAGAAACCCGCTGTATCAGAAAGTGATGCTGAGAAGAAGGCGCTGGGTACTCTTGAGAACTTGCCTGATGTTGGATCACTGTATTCGTGTGACCACTGTAACCGATCATTCAGTAACAAACCTCTGCGCGATGCTCATATGTTGGACACGTGTGATGAAAAACGTTTCATTTGTTTCTACTGTAGTAGAAGGTTTACTAAGAAAATAGAAATCCGAAGACACATCAGATCCCAACATTGTTTACACAGATCATCATGCCCAGCTGGTGACCATAAACCACCCGTCagtaaaagaaatcttcagcAAAAGGATGATCAGGATAGCGGCCATCAACTACCTGACAAAGATGACCATCATAGCGATGGAATGTCTTCATCACACTCACCTGATACCTGTAAATCATCCGTCAAGGAAGAAACgcttcaaaattatgaaaacaacTCATCGCATTCTGCACATAACTACGAACAATCCGCGAAGAAAGCAAACCTTGAAAAGAATAGTGCAAACTCTTTATCGCATTCTGCTGATGACTGCAAATTCGAAGAAGAAAACCTTCAGCAGAACCGAACTGAACGGTTAGAATCGTGTCTTGTCGGCCCCGAGATGGGGGTTGGAAAAGCTACTCATATCGCCAAGACGCGTCAACCCGTTTCCAAAGCTGAGTACTTGAGAAGACACTCGGCTAGACTCAGTAACACGGGACGGTATTCGTGTTCCGTTTGTGGTCAGTCGTTCCGTTTAAAGAAAAGTCTGCGAACGCACGTTCTTGATCACATTAACCCACCTTTCACATGCGCGTACTGTCACCGTAGTTTTTCGTCGGAAGTTAGTCTGAAAATGCACTTCAAATGGCATTCAAACGTATTCAAGTGTAACGACTGCGATATGAAGTTCCTGAGAAAGTATCAATTAAGAGAGCACATACTCAGCGCTACAAATACTAAACTTTTTTTCTGCGCCAAGCCTCACTGCCAGAAATCGTTCATTAGTAATGCCAGTTTAGAAAGACATATGTTTCTACATAGTAGTTATAAGCCTCATAAGTGCACCGTCTGCGGTCTATCGTATTCCACTAAAATGGCTTTGTGGCTTCATATGAAGCAGAAACATATAACTGAACTGTATTCATGCTCTCAGTGCGGGAGAAAGTTTCTCAGTCGAAGCGTCCTTCGGAAGCATTCGTTGAATCACAAATCCCGTTCGCGGCTTGCGGGATCCCGGTGTCACCGTCGTTTTTCTCAGAAAGACAAACTGAGGAGTCGTGGTAAGAAGATGCGCGGTCAAGCTAATACATGTACTAAATCTGTGAAGACTAAAACGGGTTTTACATGCGATGACTGCGGTAAAACTTTCAGTAAAATTCGTGGTTTAAGGTGTCACATGAATCACGCTCATACAAAGAAGCCTTAA
Protein Sequence: MINHANRPSYFKVRAMDADQSVHADASTRSIAASQCRYKGSISYSDILSRHGQTGPFLTIWTEASGHLPRNCCSVTPATYIPAESAKSPPHEIENDSRNIYITNGNPIRNYFNRGPTVTVKIDAVRKLKRNTHKWFLPPSTLRQPVCVKQSSNSEEYLLPHSLAESETNSFDLIEKNSNFDRLGSEKNGATEVEVANAKQSGEQLSPRTGTIGQPLRVKQNLNSEAYVLPVLGQVLSGKQKLNSEEYLLPHSFDAPETNYNNFDFGENDEEVDPSLYEEATNSEICLRPNILRLLNEQNLNSGKCVLPHPFKAPVTNISANPVKNWKLLVSSEKINCCSTCGKTFEDEDCFRKHLLEHVRKVTRIKVRRPCSANGAKLAWKANSEEFRASKVDFFHLDASKTTDINTKPVKKLKLAVNPVKVNCCSKCRKSFEDEDRFQQHLLEHLNEESRSNSKNDAELAWNASSEEFQDTRKQGSENEQAVRGTSTVKFLRGRVPFHQYYNNIQVNTRAHAANENRNVFIIRGPPTASEHEELTVDTADGEDSRELLSDHCNSKKETRICKTDVKRTDSTVSSSEPASVFGEEEPFSEVKDAQYIQEDYETVYVFPVRTLMEEQDADNHSEVNVKQKTDTKTSYTSCAKEIDEETQQHTTSSHKCFVETANSENRKIVSYEETCTTADSCPDQDSTEMLRLFLVDSPPSTRKSSSTDIANVQFEDPAIKVFDGEKHAPAISEEERISKNITELCDELETQEIFDSFLAEYEEECNLPKNTDHSYAFSLDEEYACSDISATVNSETEIETVFVCPYMCRSFKTAYGLNRHILSSHKNHKERVNVSSLDSIDATIEECIKAFSEDKMSASDETDIEASSAKTGNVSSRLKMTKYQREALLCLYKSNPYPDTSSKSDLAAKLDLTLHRISVWFQNKRAFERKCGRLPPLSNQTNIETTEMSQPETECDFLVDADEMFLCAICNDTFVNEEDLDDHLLTHEAARVLNSNVIREPKKSDKELYFCAICHQFFTRKQKIRKHMSIHVGVDRNANGSDSDLKNDGVHDLPNCEKPAVSESDAEKKALGTLENLPDVGSLYSCDHCNRSFSNKPLRDAHMLDTCDEKRFICFYCSRRFTKKIEIRRHIRSQHCLHRSSCPAGDHKPPVSKRNLQQKDDQDSGHQLPDKDDHHSDGMSSSHSPDTCKSSVKEETLQNYENNSSHSAHNYEQSAKKANLEKNSANSLSHSADDCKFEEENLQQNRTERLESCLVGPEMGVGKATHIAKTRQPVSKAEYLRRHSARLSNTGRYSCSVCGQSFRLKKSLRTHVLDHINPPFTCAYCHRSFSSEVSLKMHFKWHSNVFKCNDCDMKFLRKYQLREHILSATNTKLFFCAKPHCQKSFISNASLERHMFLHSSYKPHKCTVCGLSYSTKMALWLHMKQKHITELYSCSQCGRKFLSRSVLRKHSLNHKSRSRLAGSRCHRRFSQKDKLRSRGKKMRGQANTCTKSVKTKTGFTCDDCGKTFSKIRGLRCHMNHAHTKKP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00005278;
90% Identity: iTF_00005278;
80% Identity: iTF_00005278;