Basic Information

Insect: Acanthococcus lagerstroemiae
Gene Symbol: -
Assembly: GCA_031841125.1
Location: CM063113.1:49676144-49679765[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00035 0.056 14.9 0.7 2 23 95 116 94 116 0.97

2 15 4.6e-06 0.00073 20.9 4.9 1 23 354 377 354 377 0.97

3 15 0.28 46 5.8 0.2 1 23 395 418 395 418 0.93

4 15 0.12 19 6.9 4.2 1 23 482 505 482 505 0.94

5 15 0.001 0.16 13.5 1.4 1 21 523 543 523 544 0.94

6 15 0.001 0.16 13.5 1.9 1 23 559 582 559 582 0.98

7 15 0.00096 0.15 13.5 2.9 1 23 597 620 597 620 0.98

8 15 2.1e-05 0.0034 18.8 1.3 1 23 628 651 628 651 0.93

9 15 0.066 11 7.8 1.3 1 23 677 699 677 699 0.97

10 15 7.2e-05 0.012 17.1 1.8 1 23 705 728 705 728 0.97

11 15 0.00053 0.085 14.4 3.5 1 23 734 756 734 756 0.98

12 15 0.00066 0.11 14.1 0.2 1 23 762 784 762 784 0.96

13 15 1.9e-05 0.003 18.9 5.2 1 23 790 812 790 812 0.98

14 15 0.00022 0.036 15.5 3.7 1 23 818 841 818 841 0.97

15 15 0.027 4.3 9.0 5.7 1 23 847 869 847 869 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00035	0.056	14.9	0.7	2	23	95	116	94	116	0.97
2	15	4.6e-06	0.00073	20.9	4.9	1	23	354	377	354	377	0.97
3	15	0.28	46	5.8	0.2	1	23	395	418	395	418	0.93
4	15	0.12	19	6.9	4.2	1	23	482	505	482	505	0.94
5	15	0.001	0.16	13.5	1.4	1	21	523	543	523	544	0.94
6	15	0.001	0.16	13.5	1.9	1	23	559	582	559	582	0.98
7	15	0.00096	0.15	13.5	2.9	1	23	597	620	597	620	0.98
8	15	2.1e-05	0.0034	18.8	1.3	1	23	628	651	628	651	0.93
9	15	0.066	11	7.8	1.3	1	23	677	699	677	699	0.97
10	15	7.2e-05	0.012	17.1	1.8	1	23	705	728	705	728	0.97
11	15	0.00053	0.085	14.4	3.5	1	23	734	756	734	756	0.98
12	15	0.00066	0.11	14.1	0.2	1	23	762	784	762	784	0.96
13	15	1.9e-05	0.003	18.9	5.2	1	23	790	812	790	812	0.98
14	15	0.00022	0.036	15.5	3.7	1	23	818	841	818	841	0.97
15	15	0.027	4.3	9.0	5.7	1	23	847	869	847	869	0.96

Sequence Information

Coding Sequence: ATGAACCCGAAGAGCCCTTTGGTTCTAGAGATTGGTTCTCCTGAACTTGAAACTTCACTAAATAACTTGCAGTACTATTATATTGCACTGAGCTCTGCAGGACATGGTACAGCTTGTAGTAGTGGGCTTTGGAGCGCCGAGTTCGTTGACGAGAAACGGGATCCACTTACTAAAAAACCACCACAGACGAGCTCTACGTTCGCCGAAGACCGTGCGAAgttaataaaaagtaaaaagttagGCCCGTTGATGAAAAACGACGAACGCGAGTTGACTGTGCTCGAGTGCGGCAAATGTACCGCGTTTTTCATCGACAGAAGCGACTACGAGAAACATCGACGGTCGCACGAGGACGCCGAAGTCGAAGAAGGCGACGATGTCCTCGGTGCCGCCGACACCTCGCTCCTTCCCAGGTCTCGAAAACTGAAGGCTGGGTACCACGAAGCCAGACCAAACGCTCGGTGGCGCAGCTCTGGTCGTCAGAAGCTACGTATCAAAATCGGCGGCAATTTGGTTGTGAAAAAGACGGCTCATAAAATGGGTGGTTCGTACCAGGAGAGCAGCTCGGAAACCGAAGAGTTCTCTCAGCCTCGACGATCCGCCAGAGTGCATTATCAAGAGTGCTCTGAAAGCGACGAAGATGGTAAAACTGCTGTCGCGGAAGAGGAAAAGGAAGCTGCGTCGAAAAAGACCAAACGAATCAAACCAGAGAATGCCGGCGGCGGATTGCAAGATCGGCAGCCGaccaggaagaagaagaaggactGCAAACGGAAACTGTTGAGTCACGAAACCACAACGGTGGTCGTGTCCGAGATAGACGAACAAGGCAACGAGACGGACTGTTTCAACGTGCAAATGCAGTCGAAACTGGAAGACGACAAACCGGAAATCCTAACCAAGGAGCTGGAAGCAGTTGGTAAAGTCGTAAAGAAGCTGAAGGAGCGTAAATTGAACCTGTCGGCTGCGTCCGGCGACGAGCCGGCGGTGAAGCGACGGAAGCCGCGACTGAAACGTCTGCGCCGTACCctcgacgacgacgacaagAGTCAAACTATCTACACGTGCGCTCACTGCCTGCGCAACTTCAGACGCAAATCGAATCTCAAGCGGCACATGTCGAAGTTGCACTGCGGCAAAGAGAAAGACGAGGCGGCCGACTCGTCCAAGTGGTTCACCGGCTACTGTTGCGACGTCTGTGGCGAAGGGCTACAGCTGCGCTCCTCGATGATGGCGCACCGCGACGTACTGCATGGCCGTATGCCCGAGATGGAGTGGTGCAAGTACCAGACGTCACTGGCCCGGGTCAAGTTCTGCGGCAGTTGCAAAAAGTACTTCCGCGCTGGCAAGCTGTTCGACGAGCACAAGTGCGACAACGGTGCTGGCATCGTCGACGAGGAGAAGTCCAAATTGATGAAGCAGGCCGAAGAGGTGCCGCCCACCTACCTGTGCCACGTGTGCAATCAGTGTTTCCGATGGAAGTGGGACTACCGGTTGCACCGCGAGACCGAGCACAAAGACACGTCGTCTGTCGACTGGTCGACGATTGTGTCCGCGAAGCTGGAGTACTTCTGCGGCAAGTGCTCGAAGGCGTACAACAACAACGACGAGTTGGAGAGCCATCAGTGTAGCGCAACGCCGCTGCAGAACGCCGCCGACGCGGTAGTGAAACCGTTCAGATGTGATATTTGCGGCAACGACTACTTCTGGAAGTCGGACTTCCGGCGCCACATGCGCACTAAGCACCCGAAAGAGAATTACCGACCGACCGAGCACGACACCATCATCTACTCGTGTCCGTACTGCGAGGAGAAGTTCTCGATGAAGAAGCGCATTCTGCACCACATGCGCAAGGTGCACAGCATCACGTCGGACTCGCCGTTTGTCTGCGTGAAGTGCAACAAGGTGTTCCGGCGGCGCGACAATCTGGACCGGCACAACGAGTCGTACCATCCGACGCTGAAAGACGAGGGCGAGGCGACCGCCATATTGTCGACGGCCGAGATACGAATTAACGGCGAGGTCGCCTACCACTGTCAGATCTGCAACCGCAATATCGCGAACCCAAACCGTTTCATATCGCACTACCGCGGCCACTACTCTGAGACCAAGTTCACGTGCGACCTGTGCGGCAAGCAGGCGAAAACGCAGCACCAGCTGAACACGCACATCAAGAACATCCACCTGAACATACGCAACTACAAGTGCGACATCTGTAACAAGAGTTTCTATACGAAGCAGGCGTGCGAGGAGCACCGGCGCATACACACTGGCGAGCGGCCGTTCTCCTGCGAGATCTGCGGCAAGACGTTCGTGGCCGGCAACGCGCTCATCTCGCACAAACGCTTCCACAACGACTTCTACCCGCACTCGTGCCATATGTGTCCGAAGAAGTTCAAGGTGCGTCGCTCGCTGATCAACCACATTCGTACGCACACCGGCGAGCGGCCATTCAAGTGCGACCTGTGCACGAAGACTTTTAACAATTCGTCGCAGTACTCGTACCACAAGAAAGTGACCCATTCGGAGGCGCGTCCGTTCTGCTGCTCGCTGTGCGGCAACTGCTTCAAAGCGAACAAATTCTTGTCCCGCCACATGGAGCTGCACGCGGTGCGCAGCCAGATTCAGAGTCGCAAACCGAATAACCCGGCGGTGTACGTGACCGCGCAGACGAAGCAGGACACGCGCACCCACACGAGCACGGTGCAGGTGTTGCCGGCAACCGGGCTGCCGGTGGCTCAAATGGCGGAGTCTGTGGCCGCACCAACCGCGCCAACCACCGTTCACGTGGTGCCGCATTACGATACGAAGGAGCCGATGGCCGGCTACCGTAACGACGACATCGCGGTGGCGTTGTACAACCTGCAGCGGGGCTGCGAACCCGCTGGCAACCAGTTCGTACGACAAGCAGAGTGCGAGCGTCCGTTCACGGCCGCCGAGTCGTACGTGGCGGCCGTGAATTACGCGTTGGCGTCGACCGAGGATTACAAAACCAGCCCTACCAGGCCGTACAATGCGAATCAGCAGCCGGCCAGCACTGTCGTCGCCGGCAAACACATGACCTGGCTTTCGTAG
Protein Sequence: MNPKSPLVLEIGSPELETSLNNLQYYYIALSSAGHGTACSSGLWSAEFVDEKRDPLTKKPPQTSSTFAEDRAKLIKSKKLGPLMKNDERELTVLECGKCTAFFIDRSDYEKHRRSHEDAEVEEGDDVLGAADTSLLPRSRKLKAGYHEARPNARWRSSGRQKLRIKIGGNLVVKKTAHKMGGSYQESSSETEEFSQPRRSARVHYQECSESDEDGKTAVAEEEKEAASKKTKRIKPENAGGGLQDRQPTRKKKKDCKRKLLSHETTTVVVSEIDEQGNETDCFNVQMQSKLEDDKPEILTKELEAVGKVVKKLKERKLNLSAASGDEPAVKRRKPRLKRLRRTLDDDDKSQTIYTCAHCLRNFRRKSNLKRHMSKLHCGKEKDEAADSSKWFTGYCCDVCGEGLQLRSSMMAHRDVLHGRMPEMEWCKYQTSLARVKFCGSCKKYFRAGKLFDEHKCDNGAGIVDEEKSKLMKQAEEVPPTYLCHVCNQCFRWKWDYRLHRETEHKDTSSVDWSTIVSAKLEYFCGKCSKAYNNNDELESHQCSATPLQNAADAVVKPFRCDICGNDYFWKSDFRRHMRTKHPKENYRPTEHDTIIYSCPYCEEKFSMKKRILHHMRKVHSITSDSPFVCVKCNKVFRRRDNLDRHNESYHPTLKDEGEATAILSTAEIRINGEVAYHCQICNRNIANPNRFISHYRGHYSETKFTCDLCGKQAKTQHQLNTHIKNIHLNIRNYKCDICNKSFYTKQACEEHRRIHTGERPFSCEICGKTFVAGNALISHKRFHNDFYPHSCHMCPKKFKVRRSLINHIRTHTGERPFKCDLCTKTFNNSSQYSYHKKVTHSEARPFCCSLCGNCFKANKFLSRHMELHAVRSQIQSRKPNNPAVYVTAQTKQDTRTHTSTVQVLPATGLPVAQMAESVAAPTAPTTVHVVPHYDTKEPMAGYRNDDIAVALYNLQRGCEPAGNQFVRQAECERPFTAAESYVAAVNYALASTEDYKTSPTRPYNANQQPASTVVAGKHMTWLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -