Basic Information

Insect: Acanthococcus lagerstroemiae
Gene Symbol: -
Assembly: GCA_031841125.1
Location: CM063106.1:33597571-33602798[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 1.1e-06 0.00017 22.8 1.0 1 23 316 338 316 338 0.97

2 8 1e-05 0.0016 19.7 3.0 1 23 344 366 344 366 0.98

3 8 1.2e-06 0.0002 22.7 1.0 1 20 372 391 372 392 0.96

4 8 8.7e-05 0.014 16.8 1.3 3 23 410 431 408 431 0.97

5 8 3.5e-07 5.7e-05 24.4 4.5 1 23 445 467 445 467 0.98

6 8 7.5e-06 0.0012 20.2 4.7 3 23 605 626 603 626 0.96

7 8 3.7e-07 6e-05 24.3 2.8 1 23 670 693 670 693 0.96

8 8 5.2e-06 0.00083 20.7 0.2 1 23 703 725 703 725 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	1.1e-06	0.00017	22.8	1.0	1	23	316	338	316	338	0.97
2	8	1e-05	0.0016	19.7	3.0	1	23	344	366	344	366	0.98
3	8	1.2e-06	0.0002	22.7	1.0	1	20	372	391	372	392	0.96
4	8	8.7e-05	0.014	16.8	1.3	3	23	410	431	408	431	0.97
5	8	3.5e-07	5.7e-05	24.4	4.5	1	23	445	467	445	467	0.98
6	8	7.5e-06	0.0012	20.2	4.7	3	23	605	626	603	626	0.96
7	8	3.7e-07	6e-05	24.3	2.8	1	23	670	693	670	693	0.96
8	8	5.2e-06	0.00083	20.7	0.2	1	23	703	725	703	725	0.98

Sequence Information

Coding Sequence: ATGACTGATGTTTCGGTTGGCAAGTTCAACTTTATCTGCCGATTATGTATGTCTTCGCTGGTCAACGGAGCTCACGAAATTTTCGAAGATGATACGGATACACCGAGGTCGATTTCGAAGAAAATCACTCTTTGTCTGCAGTTGAAAGTCGAGAGAAATGACAATTTACCAAAATCAATATGCAGTGATTGCGCCTTGAAATTAGACGAATACTACAGTTACCGTGAATCCTGTTTACAAACCGAAATAGTTTTGTTAAGATGTTTGGGTAATTCTACGTCTCCTGAATCATTACTCGATCCTTTGCCTCTACTCACTAGTAAAGTCGACTTGCAAGCAGCGAAAAAAGAGTTAACTGAGAACAATATGTCAGATGTAGAAATGTCTCCTCCTAGCGAAAATGTTGGTATAAGTGAAGATGACGAGGACGACGATATGGAGGAAGAAAAAGAAACTGATGGCGTACTTTCTTCCCTCGCATCGGACAAGTCGCTGATTGTCAGATCGAGATCACTACCAGAACTAGCCGAACCATCTCCTGATGATTATGTTCTCATGAAAGAGGAGACATTTAATTTGGATCCTGTAAAAGAACTTAATACTAGCCGTGGCGCCACGTCCAGCATTTTAGCCGATTACTTAATTGAATTTAGTAATTCAAAAACTGGGGAACCTGAATCGAAAGACAAAGATATAATGGAATCACAGAGACTTCGTCGAGAAGTTCTACCACCTATGTGGGATGTATACGAGAAGTCGATTACAGAAAAAGAGAATATCATGGCGTCGGATGGAAACATCggagagaaagaaagacaggTGACTGTAACCCATCGGCGTTACATTATCAATAAAGGGGCGTTTCCATGTTCACTGTGCGGCGACTGTTTCGAGTTCGACCAAGGAAAACGACGAGATGATTTCTCGGAAGAAAAATCCAAACTGTACGACTGCTTGACATGTGGTAAGGTATTTCCTCGGCGTAGCTCGTGGAAACGTCATCAAAGCACCCACGAGGACATAAAGCCGTTTGTGTGTCGACTTTGTAACAAAGGTTTTAATCGAAAAGAACATTTGAGTCGACACTTGTTATCTCACGGAAGTGTCAGACCCTACTCGTGTAGCGTTTGTGGTAAGCAGTTTGTACGCAAAGAGCATTTAACTCGACATCAGCTGTGCAATCCGGTCTGCGCTGTGCCAGTCGACAGCGTTCTGCGTCCATTTGGCTGTGATGTTTGTTCTCAAGGTTTCGTTCGCAAAGAACATCTGATCCGTCACCGTAAACGAGCTCATGATTTGGACCCGCCCGAGGGCGAAGCCGAACCGAAGCCGTTCACGTGCAATGTGTGCACTAAAACATTTACCCGTCGAGAACACCTGAAGAGACATCAGTTGATTCATCAGCGTGATTTCACGGCTAGCGCTTTGTCTAATTTGGCTGTTGCTGCCGGAGCTCGACTATTCGGTTCAAATAGTAATTCGAAAGACGATTTTTCCGAAGTTTCCATTTTTCCCTCGGCGCCTATTCTACCCGAAATCACGTTGTCGGAAGTGCTAGCTAATTCAACAGAAACGGACGTGATGAATCAGCATATGTTCGAAGCGTCTCAGAACTCGTCGAACGAGAACGAATGCGGTGATAACATGATGGCCGACGAAAGTGGCGTGTCTCAGTATGCGGCCAACGATGATGATGCGGAAATGGAAGATGACGCGGAAGAGCCGTTACCGCCAATTCCTGTTCTAGAGATGAACACTAACGCTGTGAATGTGACGCCGAGTGTGGTCGACATTACTAAAAGTAACACATTCTGTAACGTCTGTTTCAAGAACTTCTCTCGTCGAAGTCATCTGCTTCGTCACATGAAACGTATTCACAGTATGCAATTACCTCCGTCGTCTCGACGAAGGCCGCAACAAGTGCAACCACCGACAAAGTCCGGAGACGAAAACGGCAATTCGTTGACCGATTCTACGACCGTTGCTGTTGCGCCGCCCGAACAAACGTTCAAGTGCCAGTTATGTGGCAAAATTTTCTCGCGGCGATCTCATTTGGAACGACACGAAAAGAACATACATCAGTTGGATAAAGAAGCGAATCAGCCCTACGAATGTGTTACATGCGGAGAGACCTTCATTCAGAGTAAATTACTGGACAAGCATATGCAAGTACACGGTAATACCGTACCTGAAAATTACGTGTGGATGTGA
Protein Sequence: MTDVSVGKFNFICRLCMSSLVNGAHEIFEDDTDTPRSISKKITLCLQLKVERNDNLPKSICSDCALKLDEYYSYRESCLQTEIVLLRCLGNSTSPESLLDPLPLLTSKVDLQAAKKELTENNMSDVEMSPPSENVGISEDDEDDDMEEEKETDGVLSSLASDKSLIVRSRSLPELAEPSPDDYVLMKEETFNLDPVKELNTSRGATSSILADYLIEFSNSKTGEPESKDKDIMESQRLRREVLPPMWDVYEKSITEKENIMASDGNIGEKERQVTVTHRRYIINKGAFPCSLCGDCFEFDQGKRRDDFSEEKSKLYDCLTCGKVFPRRSSWKRHQSTHEDIKPFVCRLCNKGFNRKEHLSRHLLSHGSVRPYSCSVCGKQFVRKEHLTRHQLCNPVCAVPVDSVLRPFGCDVCSQGFVRKEHLIRHRKRAHDLDPPEGEAEPKPFTCNVCTKTFTRREHLKRHQLIHQRDFTASALSNLAVAAGARLFGSNSNSKDDFSEVSIFPSAPILPEITLSEVLANSTETDVMNQHMFEASQNSSNENECGDNMMADESGVSQYAANDDDAEMEDDAEEPLPPIPVLEMNTNAVNVTPSVVDITKSNTFCNVCFKNFSRRSHLLRHMKRIHSMQLPPSSRRRPQQVQPPTKSGDENGNSLTDSTTVAVAPPEQTFKCQLCGKIFSRRSHLERHEKNIHQLDKEANQPYECVTCGETFIQSKLLDKHMQVHGNTVPENYVWM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -