Basic Information

Insect: Acanthococcus lagerstroemiae
Gene Symbol: salm
Assembly: GCA_031841125.1
Location: CM063111.1:34684052-34726910[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 4.4e-06 0.0007 20.9 0.9 1 23 343 365 343 365 0.98

2 9 8.7e-06 0.0014 20.0 2.1 1 23 371 393 371 393 0.98

3 9 0.31 50 5.6 3.3 2 23 775 796 775 796 0.97

4 9 2.8e-08 4.5e-06 27.8 1.0 1 23 802 824 802 824 0.97

5 9 0.0005 0.08 14.4 3.5 1 23 834 856 834 856 0.98

6 9 0.0018 0.29 12.7 1.9 2 23 1154 1175 1153 1175 0.97

7 9 3.9e-07 6.2e-05 24.2 1.4 1 23 1181 1203 1181 1203 0.99

8 9 1.2e-06 0.00019 22.7 4.0 3 23 1310 1330 1308 1330 0.96

9 9 6.7e-07 0.00011 23.5 0.7 1 23 1336 1358 1336 1358 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	4.4e-06	0.0007	20.9	0.9	1	23	343	365	343	365	0.98
2	9	8.7e-06	0.0014	20.0	2.1	1	23	371	393	371	393	0.98
3	9	0.31	50	5.6	3.3	2	23	775	796	775	796	0.97
4	9	2.8e-08	4.5e-06	27.8	1.0	1	23	802	824	802	824	0.97
5	9	0.0005	0.08	14.4	3.5	1	23	834	856	834	856	0.98
6	9	0.0018	0.29	12.7	1.9	2	23	1154	1175	1153	1175	0.97
7	9	3.9e-07	6.2e-05	24.2	1.4	1	23	1181	1203	1181	1203	0.99
8	9	1.2e-06	0.00019	22.7	4.0	3	23	1310	1330	1308	1330	0.96
9	9	6.7e-07	0.00011	23.5	0.7	1	23	1336	1358	1336	1358	0.98

Sequence Information

Coding Sequence: ATGAGAACCGACGACGAACTGATAGATTTCGAAATCGATCGATCGCCGTGGACGGGAGGGGGCGGCGGCGGATCACCGGAAGTGTCCGAATTAAAGCATTACGAGACAGGCGGCGGAAGCAGCGAAGCGGAAAGCGCGAGCGGCGGCTCGTTATCAGAATCGGACGACGAAGACGCGAACGATACGAAAATGCACGACGACCGCACGGCCGAGAGCGCGACCGCGACCGCCATGGACGCCGTATACGAATCGGACGACGAAGACGCGAACGACGCGAAAATGCTTTCTAGTCACGTCACCCTGGAAGCGCTGCAGAATACCAAGGTGGCGGTCGCCCAGTTCGCGGCGACCGCGCTCGCCAACAACGCCGACAATCCGGCCGCGCTGCAGGAGCTGGCGGTGCTGCAGTCGACGCTGTACACGCTGCACCACCAGCAGATGATGCAGATCAACCTGAtccagcagctgcagcagcagtTACAGGTTACCAGATCGTCTACGCGCTCATCTAGTCCCATATTGCCGTCCGAAGAGGAGAGCGCTTGCAGCAACGTTCCTATACCGCTGGTGGTCACCAGGCCGTCGTCGCCGTCGCCCAGCATACTTACGCCGCCGAAGCCGAGTCGAACGCCGACGCCCATCAAGCAGGAGGCGAGCGTCGTCACGTCGCCGCCCACCTCCCAGCCGCTGCTGTCGACCAGCAACCACCAGCTGCTGAAGGCGTCGTCGTCACCGCCGACCGCGAACAACGCGCAGCCGGTGTCGCTGCCGCCCTGCTCCATATCGTCGTCTTTCGCCTCGTCCATCATCACGAACCTGGATCCGCCGCCGTCGCCCAGCGAGCCCAATTCGCTGGAGATGCTGAAGAAGCGCACGCAGGAGGTGCTGGACAACGCTAGTCAAGGCCTGCTGGCCAACAACCTGGCCGACGAGCTGGCGTTCCGGAAGAGCGGCTCCAACGGAAAGGGCAGTTCGCTGTCGCCGTACGACTCGAAAAGCGGCGGCCGGAATGAACCGTTTTTCAAACATCGGTGTCGCTACTGCGGGAAGGTGTTCGGCAGCGATTCCGCCCTGCAGATACATATCAGATCTCATACCGGCGAGCGGCCGTTCAAGTGCAACGTCTGCGGCAGTCGCTTCACCACCAAGGGCAACCTGAAGGTGCACTTTCAGCGGCACACCTCCAAATTTCCGCACATAAAAATGAATCCGAACCCGGTGCCCGAACACCTCGATAAGTACCATCCGCCATTGCTGGCCTCGGTGAACAACCACCAAAATCTGCCTCCTGGCATTCCTCCACCGCATCCGCACTCCAACATTCCCCTGTCTTCTCCGGGCCAGCAGTTCCCGGTGAGCGCCGCCGCAGCGTCTTTCTCGAATAGCCTGCCTCACCTTTACCGACCCACCCATCCCACGCACGATTTACCTCTGCACGCGCAACACAGGTTACCTCACGAGTCGCTGCTCAAGCCGCTCGTACCATTTCCGTTCTTCAGCAGCGGCCAGGTCCACGAGCAAGATCAGCCCGAGAACCTGATGTGCAAGCTGCCGGCCTCGTCGTCCAACCATTCCTACTCGCCGCCGCCGTCGCTGTCCGAGAACGGCGACCACTTCAAGAAGGAGCTGACCGAGGACGAAGAAACGCAAGGCCTGTCCGAGACCAGCGAGACGACCGGCGAGTACCAGCAGCGCGTCTGCGGCAACGAAGAGTCGGCCATCGGCGAGGGCGAAGGCGGTGATAGTAAGACCTCCGAGGTGGACAGGGACGACCGGGACGAGGACCACATCCACCGCGGAGCGAAGACCATCACGGACCAGGACTCGGAGAGCGACGGTCTCGACCGGTGCCACTCGCCGTACGGCGAGTGCAGCGTCGACAGCAAGTACAGTAACGAGGACCAGCCTTCTCCGAGCGGCGGCCGCGGAGACAGCAATGCGGCCACAACCGCGCACAGCGAAGAGAGTCTGCAGGAGCAGCCGGAAAACCTATCAAATAAAAGTAGGTCCGAAATTAACGATCTTTCTCTAGATAGTCGCAAGTGTTACTCGCAATCCTCCTTTCCTTCTCCGCGTTTACTCTCTCCGGCCAGTTCGATGTCGTCGGACAGTTTCGACCGATACTCGTCCTGCACTCCGCTACCCTATTCGAATAACGATTCGGATCCGTCCAAAGACCCGTTTCTGTACACGAATTTCCTTCCGCGTCCCGGCAGCACCGACAATTCCTGGGAGAATCTAATCGAAATTAATAAGACCTCCGAAACGTCCAAGTTGCAGGAGCTGGTCGACAATATCGGCCACAAGCTGACGGATCCGAACGAGTGCGTGGTGTGCCACCGCATACTGTCGTGTAAGAGCGCCCTGCAAATGCACTATCGCACGCACACAGGCGAGCGGCCGTTCCGCTGTAAGATCTGCGGGCGCAGCTTCACGACGAAGGGTAATTTGAAAACGCACATGGGCGTGCACCGAATCAAGCCGCCGGTCCGGGTGCACCACCAGTGCCCGGTGTGCCACAAACGGTTCACGAATAATCTCATATTGCAGCAGCACATTCGACTGCACACGGGGGAACCGACCGACTTGACGCCCGAGCAAATTCAGGCGTCGGAGATCAAAGAataccaccaccaccaccaccaccacctgtCCCATGTAAGCTCCGGCGGTAGCCAGCTCCTCGCGAGCCCCGGTTACGCCGTCGCGAAAGCGCAACCTCCGTCGTATGGTCCCGGTGGTAGTGGCGGCAGCAGCGGCGGCGGCAACGGCGGCGTGTCCGCGTCCGCTGCGCCGCAGCACGGCAAAGAGCCCGGCAACGGCTGTGATAACGCAGATAAGAGAGATCTGAGAGATGAGAGAGGCGAGGAGGACCACGCTAAGCGACTAAGCCTCCTCGCCGGCGGCGACAGTCCGCCCGGTTTCACGACGTCGCTAGCGGCGTTGGAGAACCACGTTAAAACCGTTACCACGATGTCCTCCCACCTGGCCATGGTAACGATGACCCAGTCGTTTGTAAATTTGTGTAGTAAATTTTCGAACGAAGGTTCGCAAAGTGATCTAAACGATGATAAATCTCCAGGTTTCAGACGCACGGACAGTCCGGGCGCGTACAGCGAACAGCTGTCGCCGCACAGCAGGCGTAGCGCGTCGCCGACGCTGTCGAACATGGAGGAGGACGATAATAGGTCGCCGCCGCCGGCAGCAGCGGATGACGCTGCCGTAAACGGCACGCCGTCGACGCCGCTAGACTTGACGCCCAAGTCGTCCGGCTCGCCGTCGACGACCGCCGCCAGCAGCGCGTTGACCGGAGGCGTGTACGCGAATAACGGCGGCGCGTTCTGTTTCACGTCCAGCTCGACGTCCACGAATAGCACGTCGCCGTTGATCTCGTCGGTGCTGACGACGCCGTTCAATCCGCTGGGTCTAGCTGTCGCTTCATCAGTACGTGGGAACACGACGTGCAATATATGTTACAAAACGTTCGCTTGCAATTCGGCGCTCGAAATTCATTACCGAAGCCATACAAAAGAGAGACCTTTCAAATGTACTGTCTGTGATAGAGGATTCTCAACCAAGGGTAACATGAAACAGCACATGTTAACGCACAAGATACGCGACATGCCATCGCACCTGTTCGAGAAGTCGCCGGGCAGCGTGAGCGTGCCGTCCTCGTTGGTGGACGAGACCAGCAACACCAGCACCGAGAGCAAGGATGCCGCCGCATTACCAATATCTGCTGCCAGTCTGCGTTGCGTGCCCATCGAAAGTCTGACGCCGACGCTGCACAAAGCGGCGCCATCGTCGCTAAGCTCCTTACCGACGCCCATTACCGAGCCGGTAGCCGTGCCTCCTCAAAAACGATCTCCGGATAGCGATTCCACCTTGCCAGTTCCTAAAAGACAACCCAGCTTGCCTAAGCATTTGTGTCACGTGTGCAATAAAAATTTCTCCTCGTCTTCGGCGCTGCAGATTCACATGCGTACCCATACCGGAGATAAACCATTTCGATGTACAATCTGTCTGAAAGCTTTCACTACCAAAGGAAACCTCAAGGTGCATATGGGTACTCATATGTGGACCAACGGAGCTTCGAGAAGAGGACGTCGAATGTCGTTAGAGCTGCCCTCGTTGCCGATCAGCAGTAAGGATTCGCATCCTGATTTGTTTCACCGGCGACCAGACTTATTCTACCCGTACCTGCCAACGCCTTTCCTTAATGGAGTCCATCAGAAGTTGAGTGAAATATCATCGATTCAGAGCGTGAGCGGTAATCTAACGAACGGATTTTTCCCGTTTGGAGGCTACGGTAGTCTGACGGATCTGAAGAGGCCCAGTTCGCCGTCGCCGCCGCTGTCCTCAATCAACAGACATGTGAATTCGGACTCGCATCCAGCGCCCTCACCTTGGGATTTGCACTTCGAACGTAAAGCAGTTGACGACCGGGGGGTTGAACCGTGCACCCCGTCACCGCCGCATCAGTCGCAGCATCAGCCCCATGGCGAAGGACTGGCCGCATAG
Protein Sequence: MRTDDELIDFEIDRSPWTGGGGGGSPEVSELKHYETGGGSSEAESASGGSLSESDDEDANDTKMHDDRTAESATATAMDAVYESDDEDANDAKMLSSHVTLEALQNTKVAVAQFAATALANNADNPAALQELAVLQSTLYTLHHQQMMQINLIQQLQQQLQVTRSSTRSSSPILPSEEESACSNVPIPLVVTRPSSPSPSILTPPKPSRTPTPIKQEASVVTSPPTSQPLLSTSNHQLLKASSSPPTANNAQPVSLPPCSISSSFASSIITNLDPPPSPSEPNSLEMLKKRTQEVLDNASQGLLANNLADELAFRKSGSNGKGSSLSPYDSKSGGRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTSKFPHIKMNPNPVPEHLDKYHPPLLASVNNHQNLPPGIPPPHPHSNIPLSSPGQQFPVSAAAASFSNSLPHLYRPTHPTHDLPLHAQHRLPHESLLKPLVPFPFFSSGQVHEQDQPENLMCKLPASSSNHSYSPPPSLSENGDHFKKELTEDEETQGLSETSETTGEYQQRVCGNEESAIGEGEGGDSKTSEVDRDDRDEDHIHRGAKTITDQDSESDGLDRCHSPYGECSVDSKYSNEDQPSPSGGRGDSNAATTAHSEESLQEQPENLSNKSRSEINDLSLDSRKCYSQSSFPSPRLLSPASSMSSDSFDRYSSCTPLPYSNNDSDPSKDPFLYTNFLPRPGSTDNSWENLIEINKTSETSKLQELVDNIGHKLTDPNECVVCHRILSCKSALQMHYRTHTGERPFRCKICGRSFTTKGNLKTHMGVHRIKPPVRVHHQCPVCHKRFTNNLILQQHIRLHTGEPTDLTPEQIQASEIKEYHHHHHHHLSHVSSGGSQLLASPGYAVAKAQPPSYGPGGSGGSSGGGNGGVSASAAPQHGKEPGNGCDNADKRDLRDERGEEDHAKRLSLLAGGDSPPGFTTSLAALENHVKTVTTMSSHLAMVTMTQSFVNLCSKFSNEGSQSDLNDDKSPGFRRTDSPGAYSEQLSPHSRRSASPTLSNMEEDDNRSPPPAAADDAAVNGTPSTPLDLTPKSSGSPSTTAASSALTGGVYANNGGAFCFTSSSTSTNSTSPLISSVLTTPFNPLGLAVASSVRGNTTCNICYKTFACNSALEIHYRSHTKERPFKCTVCDRGFSTKGNMKQHMLTHKIRDMPSHLFEKSPGSVSVPSSLVDETSNTSTESKDAAALPISAASLRCVPIESLTPTLHKAAPSSLSSLPTPITEPVAVPPQKRSPDSDSTLPVPKRQPSLPKHLCHVCNKNFSSSSALQIHMRTHTGDKPFRCTICLKAFTTKGNLKVHMGTHMWTNGASRRGRRMSLELPSLPISSKDSHPDLFHRRPDLFYPYLPTPFLNGVHQKLSEISSIQSVSGNLTNGFFPFGGYGSLTDLKRPSSPSPPLSSINRHVNSDSHPAPSPWDLHFERKAVDDRGVEPCTPSPPHQSQHQPHGEGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -