Basic Information

Insect: Acanthococcus lagerstroemiae
Gene Symbol: -
Assembly: GCA_031841125.1
Location: CM063113.1:49633104-49644236[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00029 0.046 15.2 2.4 1 21 166 186 166 187 0.94

2 18 1.8e-05 0.0028 19.0 1.3 2 20 215 233 214 235 0.94

3 18 0.029 4.7 8.9 0.5 2 23 241 262 240 262 0.96

4 18 1.7e-06 0.00028 22.2 1.9 3 23 269 289 267 289 0.95

5 18 3.5e-05 0.0056 18.1 0.6 1 23 294 317 294 317 0.97

6 18 0.065 10 7.8 0.7 1 23 343 365 343 365 0.95

7 18 0.0044 0.7 11.5 0.4 1 23 628 651 628 651 0.98

8 18 0.035 5.6 8.6 0.1 1 23 686 708 686 708 0.98

9 18 0.00028 0.046 15.2 1.1 1 23 738 761 738 761 0.96

10 18 0.0022 0.36 12.4 3.1 1 23 802 824 802 824 0.98

11 18 0.0001 0.017 16.6 2.2 1 23 829 852 829 852 0.97

12 18 1.6 2.5e+02 3.4 3.3 2 23 869 891 868 891 0.82

13 18 7.4e-06 0.0012 20.2 0.9 1 23 897 920 897 920 0.96

14 18 2.9e-05 0.0047 18.3 2.0 3 23 928 948 927 948 0.99

15 18 9.2e-07 0.00015 23.0 0.5 2 23 955 976 954 976 0.95

16 18 0.00012 0.02 16.3 6.4 1 23 982 1004 982 1004 0.96

17 18 2.4e-05 0.0038 18.6 4.9 1 23 1010 1032 1010 1032 0.95

18 18 0.00033 0.053 15.0 3.1 1 23 1038 1060 1038 1060 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00029	0.046	15.2	2.4	1	21	166	186	166	187	0.94
2	18	1.8e-05	0.0028	19.0	1.3	2	20	215	233	214	235	0.94
3	18	0.029	4.7	8.9	0.5	2	23	241	262	240	262	0.96
4	18	1.7e-06	0.00028	22.2	1.9	3	23	269	289	267	289	0.95
5	18	3.5e-05	0.0056	18.1	0.6	1	23	294	317	294	317	0.97
6	18	0.065	10	7.8	0.7	1	23	343	365	343	365	0.95
7	18	0.0044	0.7	11.5	0.4	1	23	628	651	628	651	0.98
8	18	0.035	5.6	8.6	0.1	1	23	686	708	686	708	0.98
9	18	0.00028	0.046	15.2	1.1	1	23	738	761	738	761	0.96
10	18	0.0022	0.36	12.4	3.1	1	23	802	824	802	824	0.98
11	18	0.0001	0.017	16.6	2.2	1	23	829	852	829	852	0.97
12	18	1.6	2.5e+02	3.4	3.3	2	23	869	891	868	891	0.82
13	18	7.4e-06	0.0012	20.2	0.9	1	23	897	920	897	920	0.96
14	18	2.9e-05	0.0047	18.3	2.0	3	23	928	948	927	948	0.99
15	18	9.2e-07	0.00015	23.0	0.5	2	23	955	976	954	976	0.95
16	18	0.00012	0.02	16.3	6.4	1	23	982	1004	982	1004	0.96
17	18	2.4e-05	0.0038	18.6	4.9	1	23	1010	1032	1010	1032	0.95
18	18	0.00033	0.053	15.0	3.1	1	23	1038	1060	1038	1060	0.98

Sequence Information

Coding Sequence: ATGGAGACGGGTGATAAAGAATTGGATGCCGAATTGGAAACCCATCGCAAACACTTATACAGTTTTTACTCAGCGTGTAATGTCCTTAGAAATGATTCTGAGTCTTCATATAGTAATCCATCAGATTCTGTTACCAAGAAACCAGTGGATAAATATGATATTATGAATGATTGTTACTACGTATCATTAAACTCTGAATTTGGAAAGCGTGCCGAGTCTCTTCCTGagttcatcaaaattgaaagggaCGAAACAGATGAGTGTGTCAAGGATGGATTTTACAATGAAATTAAGGGGCATATCGATAAATATTACAGTGGTGCTGAGAATAATCGGGCTTCAGATGGCGAGCTGTCGTCTTCATTCAATGATAGAGGAACAGTTTCCATCAAATCTGAGAATCAAGATTGGACTCGAAGTCCGGAAGACAGTCTAGAATGGCagccttcaaattttgaattatatgaCAGCATATCGGCCGTTTCCAAAACAAAGTACACTTGTTACCATTGTAACCGCGATTTCAGCCGTAAGAAGTCTATGAGAAAACACGTCCTCGTATGCCAGTATTCAGCGGTCTGGAAACGCAGAGGACCcaatgttaaaaaaagaaaagccttTCGGATTGGCAACTGGATGATCAAATGTCATAAGTGCGATCGCAAGTTTCCGCAGAAAGCTAGTCTTAAACGACATTTAGACAGTAATTCGTGCTCTATAAGCTGTGAAGTTTGTGGATACATTCCACGCAAGCCATGCGAACTGAAAAGGCACATGGTAAAGCACACTCGCGAGCGAATTTTCTGTCCACACTGCGATAAAAAGTTCAGTCGACCGTATATGCTAACGAAGCACTTATCCGAGCATCAAATTACTGTTTACCGATGCGTGAGGTGTCCGAAAAAATTCATTCGGTCGGAGGAGTTGAAGAACCACGAAAGTACTGCCCATTCTGAGGTTGACAAGAACTTTCGGTCCGAACAAATGGCTCATCGTGAAACTGATGAGAACACCGAAAAAACGAAGTTTTTGTGTAAACTGTGTCAGATTTACTTCGAAATTGAGCGCAATTATCTGAGACATATGGCTAAACATTCCTCTCCTAGTTTTGTTGCGAAACCGCACGTCTGCCACGTCCTGGGAAACGATACATTCATAGTCAAACCAGATCCTGCAGAACTGTGTCGCTTATGTGCGAATACCGATAATCAGCTTATTCctattttcaagggagaaggACTGGAACATAATATTCCttccaaattggaaaaacatCTACCTATCGTAAAAATTACAGAAACAGACAAGTTACCTTTGCAAGTATGCTATCAATGTGCATCAACATTAATAGCTTGGCACAATCTTTACGAAGGCTGTTCTGTGGCGGATAAACGTCTCAGAGAAATATTGGCTgtagatgaaaaattatatcatGACGAAGAAACGTTCGAAGATTACGGTGATGATTTTCGCGATGACGATTTCGATCAGCCGCACGCTGACTTCGTCCAGTTGAATACCGCTAGTACCAGTTCACAATCGGGGCTAGGCCCGAATACGAGCATTAGTGAGATCACTCAACTCGGTAGTTCGAACACTTTTGATGAGACTGAAAATAACAATCTCGCCGATGAACGGTGTTTGCGATGGAAATACGGCTCGACGAAACGCTTCGACGATGACGTCTGCGCAAACATGTCTGGAATAGGAAGGAACACGATCGAGCATTCGTCGTCTGTGACTAACGACGATCTTGTAAACGAGTTTCTTGTTCGGCGAGATGAGGTTCCGCCGTCGGCAAAGGTCGAGAGAGTGAGCTCCAACGTGTGCGATTGCGTGTGGAGCAACAACGAGTGCGCGAAATGCGCGCACTATGATTGCTTTAAGTGTAGCTTCTGTCCGATGGTCTTCATATACGCCGGAGTCCGGAACCGACACTTGCGGATGTCGCATAAAAACGAGTTGGTAAACCAGTGTGGGGATTTGTTCCTGCAGAACTTTATAGGACGTCCGGCGGCAGAGAACGAGAATGACAGTCTCGACGATGTTGTTCAGTATTACTGTGCCGAGTGCTCTGACGCATTTCAGAACAAGGTGGATTTGATCGGCCATCTTCGTGAGCACTCCCTGCAAATGAAATGTACTCTCGCCAAGTCTAGTCAAAATCAGCGACTATCGAACGGTTCGGTTCGGAGAAGGTCGCGCAGTCAGTATCAGTGCGAGCATTGCTCCAAAGTTGTGTCCACCAAAGAGGGAATTAAAAAGCATTTATCCATTTCTCACCCCTGTGGAACTCGAGTTTCGTTCAACCAAACGGTGAGAAAGCGAAGTAGTAAGTCGACTCCAGGTGTGAAACGAAATGAATCTGATCAGGTGGATGCGGGCGCGCTGAAGAATGGATACTACACGTGCGACATCTGCGGTCAAATATTCCTGAAACGACATTCGTTTACGCGACACGTGAATAAGCACTCGTCAAATCGTTACAACTGTGATAAGTGCAAGAAATCATTTGCCAGCGAAACTACCCTAAGTACTCACCAGCTTCGAAAGCACAAAGAGCTACCGAAGAACGTGTTCTTTCTGAACGGACGCAAGTACCTGAAGTGCAATCAGTGCTCTTTCACGTGTAGGAACGAAAGGAATAAACTTGAAGAACACATGCGCGTGCACACCGGCGAGAAGCCGTTCACGTGTGAGTTGTGCGGCAAGCAGTTTCGTACAAAGGCCTTGTTACGGGTGCACAATAGGTACGTGCATGAGGGTATCAAAGAGCACGGGTGCGACATATGCGGCCGGTGTTTCTCGAACAAACGTTACATGGAAGAGCATCGACGAATCCACACCGGCGAGAAGCCGCTGATTTGCGACCTGTGTGGTAAGACATTCCGACAGAATTCGTCGCTGTCGAAACACATCGAGAACCATCTCGGCATCAAGAAACACGCATGCTCTCTGTGCGACAGGCGATTCTCGAATAGTCATCATTTGAGTATCCACATTAAGCGTCATTTGGGCGAGGCTAGTCATAAGTGCGAGCATTGCGACAAGAAGTTCGTCGACCAGTATCAGCTGAAGAACCACAAAGTGGTGCATTCCGAAGCCAGACCGTTCGTGTGTAAGTTGTGCGGCAACGGATTCAAATTGAGGAAGCATTTGAAGCAGCACGGTCGAACTCACAGATCTTGA
Protein Sequence: METGDKELDAELETHRKHLYSFYSACNVLRNDSESSYSNPSDSVTKKPVDKYDIMNDCYYVSLNSEFGKRAESLPEFIKIERDETDECVKDGFYNEIKGHIDKYYSGAENNRASDGELSSSFNDRGTVSIKSENQDWTRSPEDSLEWQPSNFELYDSISAVSKTKYTCYHCNRDFSRKKSMRKHVLVCQYSAVWKRRGPNVKKRKAFRIGNWMIKCHKCDRKFPQKASLKRHLDSNSCSISCEVCGYIPRKPCELKRHMVKHTRERIFCPHCDKKFSRPYMLTKHLSEHQITVYRCVRCPKKFIRSEELKNHESTAHSEVDKNFRSEQMAHRETDENTEKTKFLCKLCQIYFEIERNYLRHMAKHSSPSFVAKPHVCHVLGNDTFIVKPDPAELCRLCANTDNQLIPIFKGEGLEHNIPSKLEKHLPIVKITETDKLPLQVCYQCASTLIAWHNLYEGCSVADKRLREILAVDEKLYHDEETFEDYGDDFRDDDFDQPHADFVQLNTASTSSQSGLGPNTSISEITQLGSSNTFDETENNNLADERCLRWKYGSTKRFDDDVCANMSGIGRNTIEHSSSVTNDDLVNEFLVRRDEVPPSAKVERVSSNVCDCVWSNNECAKCAHYDCFKCSFCPMVFIYAGVRNRHLRMSHKNELVNQCGDLFLQNFIGRPAAENENDSLDDVVQYYCAECSDAFQNKVDLIGHLREHSLQMKCTLAKSSQNQRLSNGSVRRRSRSQYQCEHCSKVVSTKEGIKKHLSISHPCGTRVSFNQTVRKRSSKSTPGVKRNESDQVDAGALKNGYYTCDICGQIFLKRHSFTRHVNKHSSNRYNCDKCKKSFASETTLSTHQLRKHKELPKNVFFLNGRKYLKCNQCSFTCRNERNKLEEHMRVHTGEKPFTCELCGKQFRTKALLRVHNRYVHEGIKEHGCDICGRCFSNKRYMEEHRRIHTGEKPLICDLCGKTFRQNSSLSKHIENHLGIKKHACSLCDRRFSNSHHLSIHIKRHLGEASHKCEHCDKKFVDQYQLKNHKVVHSEARPFVCKLCGNGFKLRKHLKQHGRTHRS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -