Alag032217.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Acanthococcus lagerstroemiae
Gene Symbol
-
Assembly
GCA_031841125.1
Location
CM063114.1:41124161-41143713[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 5.2e-05 0.0084 17.5 5.7 1 23 133 155 133 155 0.98
2 28 0.22 36 6.1 7.1 1 23 201 223 201 223 0.92
3 28 2.7e-06 0.00044 21.6 1.4 1 23 266 288 266 288 0.98
4 28 9.3e-06 0.0015 19.9 0.8 1 23 375 397 375 397 0.98
5 28 0.00033 0.052 15.0 2.9 2 23 432 453 432 453 0.96
6 28 0.00079 0.13 13.8 0.7 2 23 476 498 476 498 0.91
7 28 0.00017 0.028 15.9 0.8 1 23 522 545 522 545 0.97
8 28 0.034 5.4 8.7 0.4 1 23 576 599 576 599 0.93
9 28 8e-05 0.013 16.9 2.2 1 23 634 656 634 656 0.94
10 28 0.00026 0.042 15.3 2.8 1 23 699 721 699 721 0.95
11 28 0.00092 0.15 13.6 0.1 2 23 735 757 734 757 0.93
12 28 0.16 26 6.5 0.2 1 19 790 808 790 813 0.85
13 28 0.19 31 6.3 0.3 3 21 836 854 834 857 0.85
14 28 0.0023 0.37 12.3 1.1 1 23 875 898 875 898 0.92
15 28 9.5e-05 0.015 16.7 1.8 1 19 913 931 913 934 0.94
16 28 1.9e-05 0.003 18.9 0.9 1 23 946 968 946 968 0.98
17 28 0.0024 0.39 12.3 0.1 2 23 1006 1027 1005 1027 0.97
18 28 0.0013 0.21 13.1 0.1 1 23 1061 1083 1061 1083 0.98
19 28 0.00025 0.04 15.4 1.0 1 23 1144 1166 1144 1166 0.98
20 28 0.0086 1.4 10.5 1.6 2 23 1182 1204 1182 1204 0.96
21 28 0.0068 1.1 10.9 1.2 1 19 1240 1258 1240 1260 0.95
22 28 0.23 36 6.1 4.8 1 21 1285 1305 1285 1306 0.95
23 28 2.2e-05 0.0035 18.7 8.0 1 23 1351 1373 1351 1373 0.97
24 28 0.00031 0.05 15.1 1.2 1 23 1416 1438 1416 1438 0.99
25 28 0.02 3.3 9.4 0.7 1 23 1485 1507 1485 1507 0.98
26 28 0.067 11 7.7 2.9 1 23 1532 1555 1532 1555 0.98
27 28 0.83 1.3e+02 4.3 0.1 1 10 1560 1569 1560 1576 0.95
28 28 7.4e-05 0.012 17.1 4.7 1 23 1588 1610 1588 1610 0.98

Sequence Information

Coding Sequence
ATGTCCAGAAGGAAGAAGGAAGAATCCCTGAAAGCAGCAGCCTTTGGGGAACTTTTTAAAGCAGTCAATGAACGAGTGACGGAAGGGGAATCGAACGGCATCGGAGCGGAGCAGCTGAAGGATAAACTGCGAGCGTGCAACAATATGACCAGCGAGAACCACCAAGACGATGCCGACTGCGTGGTCGACAGCACTCTGCGAGCATGCAACAATATGACCAGCGAGAACCACCAAGACGATGCCGACTGCGTGGTCGACAGCACTCAAAACGCgattgtaaaaaaagaaattaccgATTTGAACGGCAGCGCGTCCGCCGACGATGCGTCCGAAAAGGACCCGCTGAACGGCACCGACGAGTTCAACGACCTGCCCACCAGCACCGACGACAAACCCTACAAATGCCACATCTGCGGCAAATTGTTCTCGCGCAACAGCAGCCTCAAGTGCCACATTCGGTTGCACCTCGAAGGACCGGAGAACATCTTGCGCAGCGGTAGCGCCGGTCCGCCCAACGATTCGAGTGCGCCCGCCGCCGACGAGACTCGCGACGGCGACGATACGCCGCGCCGCCGAGAGGAGATCGAAGAGGACGCGCCCTACTCCTGCATCTTCTGCGACAAACATTTCTCGCGCAAGAGCAGCCTCAAGTGTCACATTCAGTTCCACGTGAAAGCCTTTCAGGCTGAACGGTGCAATGGCGACGCGGAGGCCGCCGACGGAAAGGAGACGCCGCGACGCGAGAGCAGCAGCGACGTGGAGGCCAGCCCGCAGGCGTCACCGCTGGACAAAGGATACACGTGCGTGATCTGTGACCAGCGGTTCTCGCGTAAGAGCAGCCTGATCATGCACTACCGTAACCACCCGATCCTGAAGATGACGCCCGAGGAAGAGGAGCTGCACGCTACCGATCAATGCTGCCGCAGGTTCAGTATCGACATCATCAAGGAAGAGCAGACGGTCGCTGTCAAGGAGGAGCAGGTGGTCCATTGCAAGGAGGAACAGATGGTTAAATGCGAGGAGCGGAAGCGGTCGACGTCTGAGAGAGACGAGCCGGCGACGCCCGGCAAAGGCGACCCGCTGGTGGACGACGGCGCCAGCGGCGACGGTGACGACAAGCAGTACAAGTGCTACATCTGCGACAAACTGTTCGCGCGCAACAGCAGCCTCATGTGGCACATTCAATTCCACGAAACGCATATGTACTCGAAGGCGAAGAAGTCGTCGGACGTGTGCACCGATAACGGAGTGAAATATGTGAACGACGCGGCGTTTACGGACGACGGGGAGAACCGGTGCCGCATATGCGGCAAGACATACCACTCGAACGCCAGTCTGCGGCGGCACTTGACCTACCACGGCAAGGAGGTGCAGTTCGTGAACGTGGACATGAATTCGGAGGAGAACCCGACCTCGAAGGAGGCGACCTGCGAGCTGTGCGGCCGCTCGTTCATCAACGTGACGAGCCTGAAGAAACATTTCTCGCAGATACACCGCGGATGTCAAATGCGCCAGCCGGGGGAGGAGGACGCGGTCGACGCGCTCGATGATCAGGACGGCGATTTCAAGTGCGACGCGTGCGACCGCTCGTATTTTTCAATGAGCAGCCTGAAACGGCACATCTTATCGGTGCACAAAGCCGCCGACGAGACGCAATCGCCGGCAACGCCAGCGAAGGGCACGCCGCCGTTGAAGGTGGTCTCGATGCCTGACGAGAACGGCCAGTATAAGTGCGACCAGTGTCCGAAGCTGTTCGACAGCGCCCGGGCGAAGAACATCCACATTGCGCACGGGCATCGCGCGGCCGCTGTCGAAAAGCTCGTCCACCTTGCCCAGCACAAGGCGGccctcgagaacgcgatagatGGCATTTCGTACGTAGAAAACGCGGACGGACTGTACGAGTGCCATCTGTGCGACCGCACCTTCGACCGGAAGAAGGGCCTGAGTCGGCACGTGGGCTACCATAACACCGATCAGACGGCGGCCCAACAGGACGATCAATCGGCGCAGCCAGACGATCAGCCGGACGACTCGAGCGACATCGATCTCACCATCGAGGAGTGTGATGACGAGCCGAGCAGCACCGGTGTGTTCTCGTGCCGGCACTGCAACCGCGTGTTCGAGAATAAGAAAGGCCTGAGCCGGCACATCGGCTATCACAATAGTATGTCGAACCAGACGGAAGGGAAAGCGCCGATCGTGTGCGATTACTGCGACAGGAGTTTCGACTCGACCAGGGCGGTGCGGGCACACATGACGCAGGCGCACCGAGAACTACTGTTAAACGATTCGAACCCGCAGTCCGAATCAGAGCAGGAGCAGGATGAATCGGAAGAGGAAGAGAAGGAAGAGGAGAAGGAGCAGTTCGAGTGTTTCCAGTGTCCCCGAGTGTTCGACAGCAAGCGGGCGCGAAGTATCCACGCGGTGCAGGCTCACAAGCCGGCGCCAGTAGACGAATCAACATCGAAAGGGACGACCGCCGAGTCGCACAGTTCGTTCGGCTGCCCGTACTGCGACCGCCACTTCGACAGCGGCCGAGCGATGAACATTCACGCGGCCGCCAAACATCCGGAGCAGGTGACTGCAGCAAAGGCGTCCATGGAAGTGCACTGCGACATGTTCCAGTGCAGCATGTGCGACCGAAAGTTCGACACTAGCCGGGCCATGAATATACACTCGACCTCCCAGCACAAGAGCGAGAGCCGGCCGGAGCCGGATGAGGACACCGAGCAGTACTGTTGCGACGTGTGCGACAAGTCGTTCACGTCGAAGAAGAGTTTGACCGAACACGCGACCAACCAGTGCGGCCCGGCGGTGGGCGAGAAGATCTGGTACTCGTGCAAAGAGTGCCCGAAGGTGTTCGCGCATCCCAAAAGCGTGAGCCGGCATGTGCGCGAGCATAAGTTAGAGCGCGAACGCGCCGAACTAGAAAAGGCGGCCGGCGCGAAAAGCGACGATCTTACGGCTGAGGAGGCGGCATATGTAATCGGCGCCGTGGACGAAACGAACTTGAAGTGCGGCCTGTGCGCTAAGTCGTTCGTCAATGTGAAGGCACTGGCCGGCCACATGAAGGTGCATAAAGGAGTGGCGCCGTTCGAGTCGCTATCCGCCGAATCCGGCCAATCGACGTCGCCGCATGTCAGCGAGCCGAGCGAACCCGAGGaaggcggaaaaattttcaagtgtcGTGTTTGTGATAGGAGTTTCCCGTCCGGCGTCGGTCTCGGCGGTCACATGCGAATCCATTCGGCGACGGtggctgctgcggcggcggcggcggctgCGGCGCGAAAGACGCCTTCCGAAAAGACGCCCTCTGAAAAGACGCCCTCCGAAAGCGACGCGCTACTGGAGCCGGTCTCATCGTCTCTGCCAGTGGCGAAAGAGATTGAACTGTCGAGTACGAGCGTAGAAGAGGAAGAGGAGTTCTCGTGCGATCTGTGCAAGCAGGCATTCTACCGGAAGCAGGACTTGGGCAAGCATTTACGCGGTCACATGGCCGGCACGATCGGAATGGAAGGCATCAGCCCGGACGCACCGAAATGCCAAGTTTGTCAACGTTTGTTCAGTGGCGAGAAGAGTCTGAAAACACACATGTACAGGTACCACCGAGAGCTTATCCAGATCAAGCGGCCCCCGAAGAGCCCCGCTGCTGAAGTGACTGTCTCCAAGGTGAACGACGTGGACGGCCGGGTGCGTTATGAAGAGGAACTGTACAAATGTAATCGGTGCGACCAGACGTACACCAACTACCGGGCATTCAAGAGTCACGCGCTCTTCAACTGTGTGAACAACCGAAAACGTCCGCGCATTGCAGACCTACCCGAACGCGCCGTCAGCGAGGAGCTGTTCAAGTGCGACTACTGCGAGCAGTCGTTCTTGCTGCGGTGCCACCTGCAGAAACACCTGAAGTCGCGATGCAACGCCGTCGACCTCAGGAACGACCCGACCATCGAGAACGACAGCGCCGATATACCGTTGCCCAGCAAACGCGCGCGCCGCTCCACCTTCATTAGTCCGCTGTACGAGTACGAGCCGATCGGCGCGCACAAGTGCGACGAGTGCGGCAAGTGCTTCACCACTAGAACCTACCTACACCGACACATGGTGTCTCACAAGACGTCCGCGTCCAAAGCGGACGATGCGGACTCACCCGCCAAATTGACTTTCAGCTTCCGCCGGAACGGCGAGACGACGCCGTGTAAGCAGCCCAATCTGGAGGCGCACTTCCGAGACATGCCGTACGAGTGCGTGTACTGCGAGAAGTGTTTCATGGAGAAGGAGCTGCTGCTGGAGCACGTGCGTATGCATGCCGAAGCTAACGAGCTGGAGGGCGAGGAGCTGGACGACGACGATATCAACTTTCACGCTGGCGAGCATTTCGTGATCGAGGACGCGGATGGCGACGAGGAGCACTTCATCTTCGAGCAGCACGACGACAACGAGGGCTATCAGTGCAACGAGTGTGACGACGCCTACAACGACAAGCTGCAGATGATCATCCACATGTCGCACCATCTGAACAGTAAGCTGCCACCTGGCCAGCAGAAATCGCTGGTGATCAGGGCGGACTCGACGTTGCTGGCGCCATACAAGTGTCGATTCTGTGAAGAGCGCTTCATCAACAAACGTTACCGTATCGGCCATCTGAGGAAGTACCACCAAGACGACATATTCCAGTGCGACGTCTGCAAGAAAATGTTCCTGTGGAAGGCGAACCTGCGGTTCCATTGTCGGCAACACGTCGTGGACACAAGGTATCGCTGCGAGTACTGCCGCAAGAACTTCACGTCGAAGTGGTTCTTAAAGCGGCACAGAAAGCTGCACTGCTTGAAAAAGCTGGTGCAGGAACTACGCGACTCTCATCTGGCCGCGGCGCAGATAATGCAGATAGTCTAG
Protein Sequence
MSRRKKEESLKAAAFGELFKAVNERVTEGESNGIGAEQLKDKLRACNNMTSENHQDDADCVVDSTLRACNNMTSENHQDDADCVVDSTQNAIVKKEITDLNGSASADDASEKDPLNGTDEFNDLPTSTDDKPYKCHICGKLFSRNSSLKCHIRLHLEGPENILRSGSAGPPNDSSAPAADETRDGDDTPRRREEIEEDAPYSCIFCDKHFSRKSSLKCHIQFHVKAFQAERCNGDAEAADGKETPRRESSSDVEASPQASPLDKGYTCVICDQRFSRKSSLIMHYRNHPILKMTPEEEELHATDQCCRRFSIDIIKEEQTVAVKEEQVVHCKEEQMVKCEERKRSTSERDEPATPGKGDPLVDDGASGDGDDKQYKCYICDKLFARNSSLMWHIQFHETHMYSKAKKSSDVCTDNGVKYVNDAAFTDDGENRCRICGKTYHSNASLRRHLTYHGKEVQFVNVDMNSEENPTSKEATCELCGRSFINVTSLKKHFSQIHRGCQMRQPGEEDAVDALDDQDGDFKCDACDRSYFSMSSLKRHILSVHKAADETQSPATPAKGTPPLKVVSMPDENGQYKCDQCPKLFDSARAKNIHIAHGHRAAAVEKLVHLAQHKAALENAIDGISYVENADGLYECHLCDRTFDRKKGLSRHVGYHNTDQTAAQQDDQSAQPDDQPDDSSDIDLTIEECDDEPSSTGVFSCRHCNRVFENKKGLSRHIGYHNSMSNQTEGKAPIVCDYCDRSFDSTRAVRAHMTQAHRELLLNDSNPQSESEQEQDESEEEEKEEEKEQFECFQCPRVFDSKRARSIHAVQAHKPAPVDESTSKGTTAESHSSFGCPYCDRHFDSGRAMNIHAAAKHPEQVTAAKASMEVHCDMFQCSMCDRKFDTSRAMNIHSTSQHKSESRPEPDEDTEQYCCDVCDKSFTSKKSLTEHATNQCGPAVGEKIWYSCKECPKVFAHPKSVSRHVREHKLERERAELEKAAGAKSDDLTAEEAAYVIGAVDETNLKCGLCAKSFVNVKALAGHMKVHKGVAPFESLSAESGQSTSPHVSEPSEPEEGGKIFKCRVCDRSFPSGVGLGGHMRIHSATVAAAAAAAAAARKTPSEKTPSEKTPSESDALLEPVSSSLPVAKEIELSSTSVEEEEEFSCDLCKQAFYRKQDLGKHLRGHMAGTIGMEGISPDAPKCQVCQRLFSGEKSLKTHMYRYHRELIQIKRPPKSPAAEVTVSKVNDVDGRVRYEEELYKCNRCDQTYTNYRAFKSHALFNCVNNRKRPRIADLPERAVSEELFKCDYCEQSFLLRCHLQKHLKSRCNAVDLRNDPTIENDSADIPLPSKRARRSTFISPLYEYEPIGAHKCDECGKCFTTRTYLHRHMVSHKTSASKADDADSPAKLTFSFRRNGETTPCKQPNLEAHFRDMPYECVYCEKCFMEKELLLEHVRMHAEANELEGEELDDDDINFHAGEHFVIEDADGDEEHFIFEQHDDNEGYQCNECDDAYNDKLQMIIHMSHHLNSKLPPGQQKSLVIRADSTLLAPYKCRFCEERFINKRYRIGHLRKYHQDDIFQCDVCKKMFLWKANLRFHCRQHVVDTRYRCEYCRKNFTSKWFLKRHRKLHCLKKLVQELRDSHLAAAQIMQIV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-