Basic Information

Insect: Acanthococcus lagerstroemiae
Gene Symbol: -
Assembly: GCA_031841125.1
Location: CM063109.1:44228119-44235131[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 5.1e-05 0.0081 17.6 1.6 1 23 408 430 408 430 0.98

2 18 0.083 13 7.4 4.3 1 19 436 454 436 458 0.91

3 18 4.1e-05 0.0065 17.9 1.4 1 23 464 486 464 486 0.99

4 18 0.0002 0.032 15.7 5.0 1 21 492 512 492 514 0.95

5 18 7.8e-05 0.012 17.0 8.3 1 23 520 542 520 542 0.99

6 18 2.8e-05 0.0044 18.4 4.8 1 23 548 570 548 570 0.97

7 18 4.1e-06 0.00066 21.0 5.1 1 23 576 598 576 598 0.98

8 18 6.2e-08 1e-05 26.7 2.8 1 23 604 626 604 626 0.98

9 18 6.1e-05 0.0098 17.3 6.7 1 23 632 654 632 654 0.97

10 18 3.6e-06 0.00057 21.2 6.8 1 23 660 682 660 682 0.98

11 18 1.6e-06 0.00025 22.3 2.8 1 23 688 710 688 710 0.98

12 18 3.6e-07 5.8e-05 24.3 6.7 1 23 716 738 716 738 0.98

13 18 2.6e-05 0.0042 18.5 7.7 1 23 744 766 744 766 0.98

14 18 7.9e-06 0.0013 20.1 7.7 1 23 772 794 772 794 0.98

15 18 3.2e-06 0.00051 21.4 4.6 1 23 800 822 800 822 0.97

16 18 6.8e-05 0.011 17.2 0.5 1 23 828 850 828 850 0.97

17 18 0.00073 0.12 13.9 4.6 1 23 860 882 860 882 0.99

18 18 2.8e-05 0.0045 18.4 4.2 1 23 888 911 888 911 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	5.1e-05	0.0081	17.6	1.6	1	23	408	430	408	430	0.98
2	18	0.083	13	7.4	4.3	1	19	436	454	436	458	0.91
3	18	4.1e-05	0.0065	17.9	1.4	1	23	464	486	464	486	0.99
4	18	0.0002	0.032	15.7	5.0	1	21	492	512	492	514	0.95
5	18	7.8e-05	0.012	17.0	8.3	1	23	520	542	520	542	0.99
6	18	2.8e-05	0.0044	18.4	4.8	1	23	548	570	548	570	0.97
7	18	4.1e-06	0.00066	21.0	5.1	1	23	576	598	576	598	0.98
8	18	6.2e-08	1e-05	26.7	2.8	1	23	604	626	604	626	0.98
9	18	6.1e-05	0.0098	17.3	6.7	1	23	632	654	632	654	0.97
10	18	3.6e-06	0.00057	21.2	6.8	1	23	660	682	660	682	0.98
11	18	1.6e-06	0.00025	22.3	2.8	1	23	688	710	688	710	0.98
12	18	3.6e-07	5.8e-05	24.3	6.7	1	23	716	738	716	738	0.98
13	18	2.6e-05	0.0042	18.5	7.7	1	23	744	766	744	766	0.98
14	18	7.9e-06	0.0013	20.1	7.7	1	23	772	794	772	794	0.98
15	18	3.2e-06	0.00051	21.4	4.6	1	23	800	822	800	822	0.97
16	18	6.8e-05	0.011	17.2	0.5	1	23	828	850	828	850	0.97
17	18	0.00073	0.12	13.9	4.6	1	23	860	882	860	882	0.99
18	18	2.8e-05	0.0045	18.4	4.2	1	23	888	911	888	911	0.96

Sequence Information

Coding Sequence: ATGAATAATGAAACTCACAACTCGGTGCCGTCCTCATCAGCATCCTCCGTTTCTAACCAGGAGGCTACTGTGGGGATGCAGCACGAAAGAACTACAACCTCCGATTCAATTCGGTTACCGCTATCCGCCTTTTCTGGTGGATTAACCAAGTACTGGGTCCTGACCAATGTATTACCAAACCAGATACCTCAGGTTTCTACCATTTACACTCTTCCTACCTCGACGGCTACGCGTATTGAAGATGGCAAGGTGTCGGTTCCCACATCGCAACCTTGCCTCACTATTCCTTCTAGTGAATCGTTGACGTTGATTGGAGAACATCGTGCTACTTCGACGGTCGCGCAGCACCAATCCCAGAGTCGTCCTGTAGCAATGACAGCTGCTACTCATCAGTCCAACGATAAATCTAAAATGGATAAAGCCACTTGTACGGACAATGTGGAGAACAACCAGGTGCATTGTCAGAAACAGGTGATACATTGTGAGCTGGCAGTTGTGAATGGAGAAACTCGACAACAACCACAAATGATCGGCTCGCTTACTCCTCAGCAGCATCAGCAGTTACAAGAGCAGATGGCTCATCATCAGGCATTGTCTCAGCACCAAGTGGTCGCTACATCTGCCCATCAAGAAGTGCACCAGAATCGAGCTATGTCTACCAACTCCTCCGGCAAGAATGAAGATCACTGTAAAGACGCAGCCGTGTCACAGATCGAAGTTACGGTCAAAGAAGAGCAGCGCATCAATGTCGAAGGGACCCACAACAACCGCGAGAAAGTAACGGAGACCAGACTACCTGTTATTTCTATCGGTTCTGGAATTCAAGACGTCAAAACCGAGCACATGATCGACGTTCGCACGCTCGACGGTCAAATCGTCAAATTGAATACCCACGACACTAGCGAATCGGGTAGCAAGGCGTTGGACGTGCCGAACATGTACAAAATGAATGTCGAAGAACTGAATCAGCTGCTGGCATATCACGAGGTGTTCGGCAAGCTGCAGTCCCACAACCCATCGGAATTGTCTGCCAGCAGCGATCAGTCCCAACAGCATTCGCCCACCGTTGCGATTCTACACAACAGCAGTGGCATGGTAGTCAAATCGTGTGACCAGCTGACCAGTGACGCCGCCACCGGCACCGTACTCAGCTCCGACTTGAGTATCGCCAATAATTCGAATTCGACGTCTCCCGCGCCCTCTATCGTACCCACCGGAACCCATACCTGCGATATTTGTGGCAAGATATTTCCATTTCGGTATCAGATGATCGTGCATCGGCGGTATCACGCTGAGAAGAAACCGTTCACGTGTCAGGTCTGCGGTAAATCGTTCGAATGTAACGATGACCTACTGAGTCACGGCAAATGCCACCTGGGCGGTAGTATGTATACGTGCTCGATTTGCTTCCATGTGTTCGCCAATGATGAGAGTCTGGAGCGGCATATCAAGCGACACGCCACCGACAAGCCGTACGCCTGCCCAACGTGCGCCAAGTGCTTTGCTCGCAAGGAGCACTTGGAGAACCATATACGCTGTCACACCGGCGATACACCTTACCGGTGCCAGTACTGTCACAAGTTCTTCACGCGCAAGGAGCACATGGTAAACCACGTGCGTAAGCACACCGGGGAGACGCCGCACCGCTGCGACATATGCAAGAAGTCGTTCACGCGCAAGGAGCACTTCGTGAACCATGTCATGTGGCATACTGGCGAGACGCCGCATACGTGTCGCATCTGCGGTAAGAAGTACACCCGCAAGGAGCACCTGGCCAACCATTTGCGGTCGCACACCAACGACACGCCGTTCAAGTGCGAGATCTGCGGCAAGTCGTTCACGCGAAAGGAGCACTTCACCAACCATATCATGTGGCACACCGGCGAGACGCCGCATCGGTGCGACTTCTGCTCAAAGACCTTCACCCGTAAGGAGCACCTGCTGAATCACGTGCGTCAGCATACGGGCGAGTCACCGCACCGCTGCACCTACTGCACCAAGTCATTCACGCGGAAAGAGCACTTGGTTAATCATATCCGGCAGCATACCGGCGAGACGCCGTTCCAGTGTCAGTTCTGCCCGAAGGCGTTCACGCGGAAAGACCATCTGGTGAACCACGTGCGCCAGCACACGGGCGAGTCGCCGCACAAGTGCACGTACTGCCCGAAATCGTTTACCCGCAAGGAACATCTGACCAACCACATCCGGCAGCACACCGGTGAGACGCCGCACCGCTGCCACTACTGCTCGAAGGGCTTCATGCGCAAAGAGCACTTGACCAACCACATACGCATCCACACTGGCGAGTCGCCGCACCGCTGCGACTTCTGCAACAAGACATTCACACGTAAGGAGCACCTGACCAACCACCTGCGGCAGCACACCGGCGAGACGGAGCACAATTGTACCGTTTGCTCGAAGCCGTTCACCCGCAAGGAGCACCTGGTGAACCACATGCGCAGCCACACCGGTGAGCGGCCGTTCGCCTGTACCGAGTGCGGTAAGTCATTCCCGCTGAAGGGCAACCTGCTGTTTCACCAGCGCTCGCACACGAAAGGCATTCCGGCGGAGCGGCCGTTCAAGTGCGACATTTGTCCGAAGGACTTCACCTGCAAGGGCCACCTGGTGTCGCACCGCCGCAGCCACTCGAACGAGCGGCCGCACGCCTGCCCGCAGTGCAACAAGTGCTTCGTGGAGCGCTCGAACATGCTGAAGCACATACGAAAGAATCACAACATGGTGGTGCCGCCACTGATGCCGGGCGTATTGCCGCACGTCAATCCGCCACCCAGCACGTCGCAGACGCTGACGCAGATACAGCAGCAGGTGGGTCAACCGAACGCGGCCAACATTCATCACACGTCCAACCAGAATCCGCTGGCGCTCATCGTGCCTGTGCCAAATACGACCGTACTGGCCACTTATTAG
Protein Sequence: MNNETHNSVPSSSASSVSNQEATVGMQHERTTTSDSIRLPLSAFSGGLTKYWVLTNVLPNQIPQVSTIYTLPTSTATRIEDGKVSVPTSQPCLTIPSSESLTLIGEHRATSTVAQHQSQSRPVAMTAATHQSNDKSKMDKATCTDNVENNQVHCQKQVIHCELAVVNGETRQQPQMIGSLTPQQHQQLQEQMAHHQALSQHQVVATSAHQEVHQNRAMSTNSSGKNEDHCKDAAVSQIEVTVKEEQRINVEGTHNNREKVTETRLPVISIGSGIQDVKTEHMIDVRTLDGQIVKLNTHDTSESGSKALDVPNMYKMNVEELNQLLAYHEVFGKLQSHNPSELSASSDQSQQHSPTVAILHNSSGMVVKSCDQLTSDAATGTVLSSDLSIANNSNSTSPAPSIVPTGTHTCDICGKIFPFRYQMIVHRRYHAEKKPFTCQVCGKSFECNDDLLSHGKCHLGGSMYTCSICFHVFANDESLERHIKRHATDKPYACPTCAKCFARKEHLENHIRCHTGDTPYRCQYCHKFFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFVNHVMWHTGETPHTCRICGKKYTRKEHLANHLRSHTNDTPFKCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCTYCTKSFTRKEHLVNHIRQHTGETPFQCQFCPKAFTRKDHLVNHVRQHTGESPHKCTYCPKSFTRKEHLTNHIRQHTGETPHRCHYCSKGFMRKEHLTNHIRIHTGESPHRCDFCNKTFTRKEHLTNHLRQHTGETEHNCTVCSKPFTRKEHLVNHMRSHTGERPFACTECGKSFPLKGNLLFHQRSHTKGIPAERPFKCDICPKDFTCKGHLVSHRRSHSNERPHACPQCNKCFVERSNMLKHIRKNHNMVVPPLMPGVLPHVNPPPSTSQTLTQIQQQVGQPNAANIHHTSNQNPLALIVPVPNTTVLATY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00194596;
90% Identity: -
80% Identity: -