Basic Information

Insect: Acanthococcus lagerstroemiae
Gene Symbol: Bcl11b
Assembly: GCA_031841125.1
Location: CM063110.1:10724274-10730712[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 1.1e-06 0.00018 22.8 1.5 2 23 223 244 222 244 0.97

2 22 6.9e-07 0.00011 23.4 2.2 1 23 250 272 250 272 0.99

3 22 5.5e-08 8.8e-06 26.9 3.4 1 23 278 300 278 300 0.98

4 22 0.66 1.1e+02 4.6 6.0 1 21 306 326 306 328 0.93

5 22 0.0097 1.6 10.4 0.4 2 23 335 356 334 356 0.97

6 22 0.56 90 4.8 2.0 5 23 366 385 361 385 0.86

7 22 0.16 26 6.5 1.6 1 23 390 413 390 413 0.94

8 22 0.0033 0.52 11.9 6.3 1 23 419 441 419 441 0.97

9 22 5.1e-05 0.0082 17.6 0.4 2 23 448 469 447 469 0.96

10 22 2.8e-08 4.5e-06 27.8 2.0 1 23 475 497 475 497 0.98

11 22 9.8e-07 0.00016 23.0 1.9 1 23 503 525 503 525 0.99

12 22 0.0037 0.6 11.7 5.3 1 23 531 554 531 554 0.98

13 22 2.6e-05 0.0042 18.5 0.3 1 23 561 583 561 583 0.98

14 22 0.00031 0.049 15.1 0.9 1 23 589 612 589 612 0.94

15 22 0.05 8.1 8.1 0.1 2 23 620 641 619 641 0.96

16 22 5.6e-07 9e-05 23.7 0.8 1 23 647 669 647 669 0.98

17 22 1e-05 0.0016 19.8 0.8 1 23 675 697 675 697 0.97

18 22 7.5e-06 0.0012 20.2 1.5 1 23 703 725 703 725 0.97

19 22 4.5e-06 0.00073 20.9 2.3 1 23 731 753 731 753 0.99

20 22 1.1e-05 0.0018 19.6 3.2 1 23 759 781 759 781 0.98

21 22 1.4e-05 0.0022 19.3 6.4 1 23 787 809 787 809 0.99

22 22 0.012 1.9 10.1 0.0 2 23 834 856 834 856 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	1.1e-06	0.00018	22.8	1.5	2	23	223	244	222	244	0.97
2	22	6.9e-07	0.00011	23.4	2.2	1	23	250	272	250	272	0.99
3	22	5.5e-08	8.8e-06	26.9	3.4	1	23	278	300	278	300	0.98
4	22	0.66	1.1e+02	4.6	6.0	1	21	306	326	306	328	0.93
5	22	0.0097	1.6	10.4	0.4	2	23	335	356	334	356	0.97
6	22	0.56	90	4.8	2.0	5	23	366	385	361	385	0.86
7	22	0.16	26	6.5	1.6	1	23	390	413	390	413	0.94
8	22	0.0033	0.52	11.9	6.3	1	23	419	441	419	441	0.97
9	22	5.1e-05	0.0082	17.6	0.4	2	23	448	469	447	469	0.96
10	22	2.8e-08	4.5e-06	27.8	2.0	1	23	475	497	475	497	0.98
11	22	9.8e-07	0.00016	23.0	1.9	1	23	503	525	503	525	0.99
12	22	0.0037	0.6	11.7	5.3	1	23	531	554	531	554	0.98
13	22	2.6e-05	0.0042	18.5	0.3	1	23	561	583	561	583	0.98
14	22	0.00031	0.049	15.1	0.9	1	23	589	612	589	612	0.94
15	22	0.05	8.1	8.1	0.1	2	23	620	641	619	641	0.96
16	22	5.6e-07	9e-05	23.7	0.8	1	23	647	669	647	669	0.98
17	22	1e-05	0.0016	19.8	0.8	1	23	675	697	675	697	0.97
18	22	7.5e-06	0.0012	20.2	1.5	1	23	703	725	703	725	0.97
19	22	4.5e-06	0.00073	20.9	2.3	1	23	731	753	731	753	0.99
20	22	1.1e-05	0.0018	19.6	3.2	1	23	759	781	759	781	0.98
21	22	1.4e-05	0.0022	19.3	6.4	1	23	787	809	787	809	0.99
22	22	0.012	1.9	10.1	0.0	2	23	834	856	834	856	0.95

Sequence Information

Coding Sequence: ATGGATGAAGCTCATCATCGTACTCGTGTTGCCGAATGCATTAGGAAATTGGTTAATATCGTCAAAATAAGGTTATCAAATGGTATGGAGAACAATAGTAGCTCCTTATTCATTGAAGAAGGAGCCAATGAAACTGTCATTACCGACGATGTATGTGAAGAAATCACGGGAACGGTTGATGATGAAACTGAAGAACCAGAGCAAGAGGGCAGTACCGACGGCCAGTGGTATTTCTACCTCTTACAAGCCGACCAGGTGATTCAAGAGAATGACTCGAAAGGAGAAGGCGATGCGGAACAATTTGAGTACATTACTGACGAGCAGTTGTCGAAAGTGGAGGTGATCGACGACTCGTATGCGTGTGATATCAGCGGGCTTCGACAGCTGCCAGATGGAACAATCGTCGCTGGTCAGGAACACTATGATTTGAACATGGACGCTATTCGTCAGATTCAAGATGCGAAAGTAGAAATTCAACAAGATGGCTATCAGTACACGATTAGCGGGTTGAACGAGTACACCAAATCTGATCCGGTGTTTGTTGAAGCTAGTGTTTACGATCAGTTTGCTTCTGAAGTAACGATTAGCAACGAAGTGATCATCGAGACGGAAAACGACTTGGGTATGTGTTTCAACGAAGAGGATATCATCATGGATGTGCCGATCCGGTGCGAGCTGTGCCCGAAAACCTTCACCAAGAAAAACAAACTGGAGCAGCACATGCGCATGCACACCGGCGAGAAGCGTTTCAAGTGCACGCACTGCGACAAAGGCTTCAACCAACGCGTCAATCTGGACAACCACATCCGGGTGCACACCGGCGAGAAGCCGTTCACCTGCACCTACTGCTCGAAAAGCTTCAGTCAGCAAGGTAACCTGAAAACGCACATGCAAAAGCACATGTACGCCGAGACGTTCGCCTGCCAGTTCTGTCGCAAGAAATGTCGCTCGCGAGTCGAACTCAACGAGCACGTCAAGTGCCACGACAAGGCCAAGGTGCTCGAGTGTCCGTTCTGCCGCATCCGCTTCCAGACGGACGACGAGTTCAGCGAGCACCTGCGGTCGCACAACAGCGACAACTGCCTGCAGTGCATTTCATGCCACGAAAACTTTAGCAGCTCGGATGCCCTGAGCGAGCACTTCGACCGGGTGCACTACCGCGGCCAGTTCGAGTGCCTGTATTGCAAGTGCACTTTCGAGAACGGCGACCGCCTGTCCGAGCACTTCGCCACTGCCCACCGCAACGGCGACGTGTTCGAGTGCCTGTCCTGCAAGAAGCACTTCAGCACCGTGTACGACCTCAAAAAGCACCATCTGTCGCACAAGGGCCAGAAGGCGCTCACCTGCGACTACTGTCAAGAGGAGTTCGTCAGCGAGCAGCTGCTCAACAAGCACATGAAGCTGCACGAAGGGCTCAAGTCGTTCGTCTGCTCGTACTGCAACCGCAGCTTCAGCCAGAAGGGCAACCTGAACACGCACATCCGACGGCACACCGGCGAGCGCCCGTTCAAGTGCACCGGCTGCGAGAAGATGTTTAGCGACTATTCGACTTTCACGCGGCACGTGCGCGTGCACACCAAGGAGAAGCCGTACAAATGCAAGTTCTGTCTGCGCCCGTTCTCGCAGCTGTCGAACCTCAAGTGCCACATCAAGCGGCGCCACGAGAACCTCGACAACGAGTTCGAGTGCGAGTACTGCGTGAAGCGTTTCGAGTCGGAGACCGAGCTGATCATGCACATGGAGACGCACACCGGCGACAAGCCGTACGTGTGTCAGGTCTGCCTGAAGAGCTTCAGCCAGTGGGCCAACCTCAAGTGCCACGTGCTGAGCGGCCACCAGGAGAAGCACGGCCTGCTGATCTGCGAGTTTTGCGAGGGCTACTACGACAGCCAGGAGGCGCTCGAGGAGCACCTGAAGACGCACAGCGGCAAGAATCCGTACATCTGCAACGTGTGCCAGAAGACGTACAGCTCGTCGGCCAACCTGAAGAAGCACGTCAAGATCCACACCGGCGTCAAGTCGTTCGCCTGCGACAAGTGCGACAAAGCGTTCTTCACCTACTCGCTGCTGCGCAACCACGCGATGACGCACTGGGGCGACAAGCCGTTCAGCTGCGAGGAGTGCGGCAAGAGCTTCATCAACAAGTACCGCCTCAAGTCGCACACGTACATACACACCGGCGAGAAGCCGTTCCGGTGCGGCTACTGCGAACGCTACTTCCGAAACCAGTCGGTGCTGCGGCGGCACGTGCGCACGCACACCGGCGAGACGCCGTACTCGTGTCCGTACTGCAGCAAAAGCTTCAAAACGCACTCGGAGAACAAGCTGCACGTGCGGGTGCACACCGGCGAGCGGCCGTACTACTGCACCCACTGCGACAAGAGCTTCCGCACGCATTCGGCCATCAAGATCCACCAGAAGACGCACTTCGTGGAGGACGGCGACGACACGACGATGACGGTGGTCGACGCCAACGGCAGTTCGCTCGTCGATATCGAGGAGTGCGATTGGTGCGGTGTGAAGGTGGCCTCGTTGGACGAGCTGAAGGCGCATGTGAAACAGGCGCACGACGAGAACTGGCTGGTCGGTGAGGACGTGCTGGAGGTGAGCATGGGCGAAGACGAGGTCGATCTCCAAGACATTGAGAAGGATGAATACgatgaggaggaggaggaagacgAAGAGGACGAAGAAGATCTGGAAGACGAGCAGGCTGAAACCGAATTCGAATACGTCGGATTGGACGACGTGATTAAAGACGAACCGGTGGACGACTTGATCGAGGAGATTTCGTTTTACGTGTGA
Protein Sequence: MDEAHHRTRVAECIRKLVNIVKIRLSNGMENNSSSLFIEEGANETVITDDVCEEITGTVDDETEEPEQEGSTDGQWYFYLLQADQVIQENDSKGEGDAEQFEYITDEQLSKVEVIDDSYACDISGLRQLPDGTIVAGQEHYDLNMDAIRQIQDAKVEIQQDGYQYTISGLNEYTKSDPVFVEASVYDQFASEVTISNEVIIETENDLGMCFNEEDIIMDVPIRCELCPKTFTKKNKLEQHMRMHTGEKRFKCTHCDKGFNQRVNLDNHIRVHTGEKPFTCTYCSKSFSQQGNLKTHMQKHMYAETFACQFCRKKCRSRVELNEHVKCHDKAKVLECPFCRIRFQTDDEFSEHLRSHNSDNCLQCISCHENFSSSDALSEHFDRVHYRGQFECLYCKCTFENGDRLSEHFATAHRNGDVFECLSCKKHFSTVYDLKKHHLSHKGQKALTCDYCQEEFVSEQLLNKHMKLHEGLKSFVCSYCNRSFSQKGNLNTHIRRHTGERPFKCTGCEKMFSDYSTFTRHVRVHTKEKPYKCKFCLRPFSQLSNLKCHIKRRHENLDNEFECEYCVKRFESETELIMHMETHTGDKPYVCQVCLKSFSQWANLKCHVLSGHQEKHGLLICEFCEGYYDSQEALEEHLKTHSGKNPYICNVCQKTYSSSANLKKHVKIHTGVKSFACDKCDKAFFTYSLLRNHAMTHWGDKPFSCEECGKSFINKYRLKSHTYIHTGEKPFRCGYCERYFRNQSVLRRHVRTHTGETPYSCPYCSKSFKTHSENKLHVRVHTGERPYYCTHCDKSFRTHSAIKIHQKTHFVEDGDDTTMTVVDANGSSLVDIEECDWCGVKVASLDELKAHVKQAHDENWLVGEDVLEVSMGEDEVDLQDIEKDEYDEEEEEDEEDEEDLEDEQAETEFEYVGLDDVIKDEPVDDLIEEISFYV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -