Alag021303.1
Basic Information
- Insect
- Acanthococcus lagerstroemiae
- Gene Symbol
- SMARCC2
- Assembly
- GCA_031841125.1
- Location
- CM063111.1:28353869-28365654[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.1e-15 7e-12 46.3 0.2 3 44 615 656 613 658 0.95 2 2 7.7 1.3e+04 -2.6 0.0 23 40 717 735 716 735 0.90
Sequence Information
- Coding Sequence
- ATGTTAGCTTTAGGTCCGAAGAAAGATGGCGGACCAAATATTAAATTCTTTGAATCTGCAGAAACTATTACCTTGTTGGATGGAGTCAGAAGTTGGTTACTGAAGAATTGCAAAAAGCATGTCCAGGCTGACCCTCCTACAAGTCGAAGCTTAGCGACGTTAATCACTCAGCTGATCCAGTTCCAAGAAGACAATTTGGGCAAAAATGTCAGCGAACCTGCACTCACTCGACTTCCGATGAAATGTTTCATGGATTTCAAACCCGGTGGTGCTTTGTGCCATATTTTAGCGAGTgtgtataaatttaaaaatgaacagGGTTGGAGGAGATTCGATTTTCAGGTCAGTAAGAGCCCTTCAAGAAAGGATAGGAGCATTGAAATGTTTTTAAACATTAGGAACGCCCTGGTTCAGAATAAATGTTTGGTGATGCCGCACGTATTCATTCGTCCAGAGGTAGAAAAAAGCGTCAAGGAAAAAGTGAAGAGTATTATAGAACGTCACGACGGAGAAATCACGGATAACGAAGAAAAAGCTACGCACATTCTATATCCTAGCACCGATCCACTGGATGAAGAATACGCTAGAGCGATATATCGTAACAAAGAAAATTTCACTTTGCTGCATTGGTATTATTTCCCAGACTCACATGACTCGTGGGCGACTGCCGATTTACCTATTGATCCGCCGGATACACTTCCGTCCTGTAATCCAAATGTGAAATGGAAAGTTTCTGCTTCCTGGGCTCTTGATTTGGAGCAGTATAACGAGTGGATGTCCGAAGAAGATTACGAAGTAGACGATCAGGGACGCAAGAAAGTTCACAAATATCGGTTATCTGTGGATGACTTCATGGCTTCTGCTGATCCAgaaagaacgaagaaaaagaagaaaggagcgAAAGCAAGATCTCCATCGCCGCCGGATCGGAAAgcgtcaaaaagaaaaaaTACCCGCGGACCATCTACGCCGTCAACCCCGTCGACGAATCCGAAAAGAAGTAAGAACGACGACGACAGCAGCACTGACGATCTGACCAAAGACATGGAGGAACCTGTTCCCGAGCCAAATATTCAAGAAGTGCCCGTAACTAAATTGACCAATCCGGCAGTCACGTCCTCGTCGAAAAAGGACAATGACCTGCAGCCTATCAAAAGCGGCACCCTGACCGATTTAGACGAGGATATGGAGAAAGTCGAAGACAATCAAATGGGTAAAACTGTCTCTGAGTCAGCGAGTCAGGACAACGCGACCAAAGACGACGGTCCGGAGGACAACGTAACCGAGCAGACGCATCATATCATCATACCGAGTTACGCCGCCTGGTTCGATTACAACTCCATACACATGATCGAGAAACGAGCGCTGCCGGAATTCTTCAACGGAAAGAATAAATCGAAAACGCCCGAAATCTATTTGGCGTACCGCAACTTCATGATCGATACGTATCGTTTGAACCCCACCGAGTATTTAACGAGCACCGCGTCCAGAAGAAATTTGGCTGGAGACGTGTGCGCCATTATGCGAGTGCACGCATTCCTGGAACAATGGGGACTGATCAATTATCAGGTGGACGCTGATAATCGACCCACCCCGATGGGCCCGCCGCCTACCTCCCACTTCCATGTGCTCTCGGATACGCCGTCCGGCTTACAGCCGATTAATCCACCGAAAACGCCGCAGCCGTCGGCGGCGAAGACGTTGCTCGATCTGGAGAAACGGCCGGACGTTATGAAGAAGACTGAGGGTGTCGAGTCGGCAGCGAACTTCGGACTACGTCTGGACCAGTACGGCAAACGCGTCGGTCTGCTGAAAAACAAGTCGGCGGCTAATTACACACGAGACTGGACGGAGCAAGAAACGCTGTTGCTGCTGGAGGCGTTGGAACTGTACAAAGACGACTGGAATAAGGTTTGCGAGCACGTCGGCACGCGAACGCAAGATGAATGTATTTTGCACTTCCTTAGATTACCAATAGAAGATCCGTACCTGGAGGATTTCGAAACTGGAGGCGCCCTAGGACCACTAGCGTACCAACCGATACCGTTCAGTAAAGTTGGGAATCCGATTATGTCGACGGTCGCATTCTTAGCTTCGGTCGTCGACCCGAGGATAGCGTCAACAGCAGCCAAAGCGGCTATGGAAGCGTTCGCCGAAATTAAGGACGAAGTGCCATCCTCGCTGATGGACTCGCACATAAAGAACGTAGAAGCGTCGCTAGTCGATGGTAAATTTGACCCGAACGCTGGCTTGCTACAAAGTGGCATCGCTGGCACCGAGAAAGAAGAAGAGTCGGAGAAGGCGAAGAAAGAAAGCGCGAGCGAAGAAACGACCAAAGAAACCGGCGGTACGACGGACGGTGTGAAATCGACCGCCGAGACCGAAGAAGTCAAAAAGGAAGACGCGACTGAGAAGCCGGCTGCCGAAGAAACGCCCTCGGTGACGGCACCCGCTACCCCCGGCGAGACGCCTAAAAAGGAACCTCAAACGGAGAGCGCGCTAGAAGAGACGACGTCCAAAGAGGAACAGCCGGAGCGACAGCGACTCATCAAAGACGCCCAGCTACAgtcggcggcggcggcggcgctGGCTGCGGCCGCCGTGAAAGCCAAACACTTGGCGGCTGTCGAAGAACGCAAGATCAAGTCGTTGGTGGCGTTGCTGGTCGAAACGCAAATGAAGAAGCTGGAGATTAAGTTGCGTCATTTCGAGGAGCTGGAGACGACGATGGAGAAGGAACGTGAAGGGTTGGAGTATCAGCGGCAGCAGTTGATCACCGAGAGACAGCAGTTCCATTTGGAGCAGCTGAAAGCGGCCGAGTTTAGGGCGCGGCAACAGGCCCAGCAGCGTTTAGCTAAtgagcaacagcagcagcagcagcagcaacaacaacaacagcagcagcagcagcagcagcagtaa
- Protein Sequence
- MLALGPKKDGGPNIKFFESAETITLLDGVRSWLLKNCKKHVQADPPTSRSLATLITQLIQFQEDNLGKNVSEPALTRLPMKCFMDFKPGGALCHILASVYKFKNEQGWRRFDFQVSKSPSRKDRSIEMFLNIRNALVQNKCLVMPHVFIRPEVEKSVKEKVKSIIERHDGEITDNEEKATHILYPSTDPLDEEYARAIYRNKENFTLLHWYYFPDSHDSWATADLPIDPPDTLPSCNPNVKWKVSASWALDLEQYNEWMSEEDYEVDDQGRKKVHKYRLSVDDFMASADPERTKKKKKGAKARSPSPPDRKASKRKNTRGPSTPSTPSTNPKRSKNDDDSSTDDLTKDMEEPVPEPNIQEVPVTKLTNPAVTSSSKKDNDLQPIKSGTLTDLDEDMEKVEDNQMGKTVSESASQDNATKDDGPEDNVTEQTHHIIIPSYAAWFDYNSIHMIEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTASRRNLAGDVCAIMRVHAFLEQWGLINYQVDADNRPTPMGPPPTSHFHVLSDTPSGLQPINPPKTPQPSAAKTLLDLEKRPDVMKKTEGVESAANFGLRLDQYGKRVGLLKNKSAANYTRDWTEQETLLLLEALELYKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDFETGGALGPLAYQPIPFSKVGNPIMSTVAFLASVVDPRIASTAAKAAMEAFAEIKDEVPSSLMDSHIKNVEASLVDGKFDPNAGLLQSGIAGTEKEEESEKAKKESASEETTKETGGTTDGVKSTAETEEVKKEDATEKPAAEETPSVTAPATPGETPKKEPQTESALEETTSKEEQPERQRLIKDAQLQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEKEREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAQQRLANEQQQQQQQQQQQQQQQQQQQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01263299;
- 90% Identity
- -
- 80% Identity
- -