Basic Information

Insect: Acanthococcus lagerstroemiae
Gene Symbol: -
Assembly: GCA_031841125.1
Location: CM063109.1:186278-191098[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.1e-07 0.0001 23.0 0.0 6 40 315 349 310 351 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.1e-07	0.0001	23.0	0.0	6	40	315	349	310	351	0.89

Sequence Information

Coding Sequence: ATGTCTCAGAGCGCAGCAGAGGAAGAAGTGAGTGAGGTCCCTCAAGAGAGAAGTGGACATAGACGAAACGTTCAGCAATGGCAGTGTAACCTCAAGAAATATGCTAGGAATAGCCGCGAAAGTAAAGTTTGTGCTCGTCGACAGTGTGGTCACGTTCGTGGGACTCATACGCGATGTGATATTCAAGATCTAACTGATAATGACATCAACGTTTTCGTGGATCAACTGTACTCGCATACAACTGCTGATAGCCAGAATCAATTTCTCAGTCAGTATATCGTACCGTATTTGCCAGTATCGCATCGTCCGCGAAAGGACACCCCAAGGAACCGAACGCACAACCAATATTTTGTTCGAAGAGCAGATGGAAAACTAGTGCTTGTGTGTGCTATGGCCTTTCAAAACATCACAGGTATAAAGCGAAAAAGGCTAAATACGATTTCTACAAACTTTTTGGATACTGAAGAGTCGCCAAAAGAACGTCGTGGCGGAGCTCGCCGCGTTGGACCACGAACGGAGATTGAGGAATCCATAATTTCGCACatccaaaaatttcctgtacAGCAAAGTCATTACAGCAGGAATAAGTCAGTACGTCAATATCTCGCTTCGGGTCTGTCGATTACAGCCATGTACAAGGCGTGGAAAGAAATACGAGAAGCCGAAGGATTACGTACTACCAAATTTTGCACGTATCGCAGAATCTTTCGCGAGCGATTTAACCTCAGCTTTCACGCTCCTGCCACTGATCTCTGTGCGACATGCGAACAGTGCCATCATCTGGTTCATGCGAAGGTGGACAAGACTACGAATCTACTCGCGTGGAAGTTACATAAAGCGCAAGCCAAGAAAATGGCCGAAAATAATGCCCGGAAGTACCATGTTAGGAAGCGAGGACGAGAGAGGAAGACTGACCAGTGTTCCTACTCCGAAGGTAGCGTATTGGAAGCGATCGATCTCGttgttgataagaaatattcggtGAGGCATGCAGCTAGATTGAAGAATATTCCTCATAAAACTCTCGATCgATATGTGAAGAAACATCACGCTGGCTGTCCGAAGGAACAAATGGTAAAGAAAAGAGGTGTTTCTACAATCCTGCCGAAAGAACTGGAGCAGGCTTTTGTCGATTATGTCAAGTTCAGGGCAAAAATTTGTTATGGTTTGACGATCAAAGAATGCAGAAAAGCTGTATATACAGTTGCCGAAAGTAACGATTTAACCGTCCCGTCAACATGGAAAGATAATCAGATGGCCGGAAGAGAATGGTTTATGCAATTTAGGGTTAGACATCCGGAGATTACTTTGAGAAAGCCAGAAGCGTGTAGCCTGTCTAGAGCTACGTCTTTCAATGAACATAACGTTGgtacgtttttcgaaaatttggaagttgTGTTGAAAAAGTATCCGAAATTAGCAGATGGCACCAGGATTTATAATTTAGACGAGACCGCGCTTACTACCGTTCAAAGTCCGGAGAAAGTCTTGACAGTTAAAGATGAGCGACAATTGAATTCAATGACTTCAGGTGAACGGGGCACTTTGGTGACTGCTTGTTGTATAGTCTGCTCCAATGGAACTTATCTTCCTCCAGCAATGGTTTTTCCTCGTGTGAATTTCAAGCGGCATATGACGAACGGAGCTCCAATTGGCACTCTTGGACTAGCAGCGAAAACCGGGTGGATGACTGCTGCATTATTTGAGGAAGTTTTCGACCATTTTATAACCCACTCATGTTCATCTCCTGAAAACCCTAGTTTACTGATTTTTGACAATCACGAATCTCACGTTACAATCCCTATTATCAAGAAGGCTCGTCAACATGGCGTGGAAATTTTGACATTACCGCCGCATTGCAGTAATAAAATGCAGCCGCTAGACATCACAGTCTACAAGTCTCTTAAGACTTTTTTCAACCGGGGATCGGACATATGGTTAGCAACTAACCCGGGACAAACGATTAGTATTTACGATGTATCGAAAATATTTGGTGAAGCCTTCTTACAATCGTTCACACCTTCGAATATCATATCTGGATTTAGAAGCTCTGGCATTTATCCATACAATCCTAATGTTTTTCCCCCTGAAACCTTCCTCTGTAGTTTTGTTACTGATCGTCCAGCGCCAGAAGAAAGTCGTCCAGCGCCAGAAGACAGTCGTCCAGCGCCAGAAGACAGTCCAGTGTCAGCAGAAAGTCCTGATGTGCCTGTGCCTTTGCCCTCTACATCTGCAAAAACGCCAGTTGAATTTCAGATAAAATCCTCGTCGTCAACAAAGTTCAAGAAAAGTCCGGAAGAAGTGTTGGGTTTTCCAAAGGCTGaagcaaggaaaaaaaataacgatacaAGAAAGAAGAGATCGTGCATCTTGACTTCAACTCCGGAACAATTAGAACTGGAAAAAAAGCAAGCTGAGAAAGACGCCAAGCAAGCTGCAAAAGATGAAAGGGCCCACAAgaaggcaaaaagaaaattggatctTGATGTTGCACCAATTCCGCGGAGAAGAGGTTGTAAACCTAAGCCGGCGCCCCCAAAAGCACCGCAATATTCCTCTGATGACGATTCGGACGGTTTACAACATCTTGCGTTGTCAGACTCGGATAGGGAAACATTTTTGGATCTTGAGGAAAACAATGAGGATTGGGAGCCCACAGTAAAGGAATTCTGCGCAGTGAAATTTGACATGAATGAGCAGCAGGACAAAATCAAACATTATATTGGCCAAATTTTGGAGTGCGATGGGAGTGCCTTTAAAATCAAATTCCTTCGGAAAACTATTGGAGAGAATAAATTCGTCTTTCCCAACATTGATGACATAGCTTGGATCAAACGGAAAAATATGGTGAAGAAGGTCAACGAGATGCAAATGGGATCTACTTCCAGACAAAACAGGATAGTTTACATACCTCATGCAACCTCAGATTTCccaaatttatattaa
Protein Sequence: MSQSAAEEEVSEVPQERSGHRRNVQQWQCNLKKYARNSRESKVCARRQCGHVRGTHTRCDIQDLTDNDINVFVDQLYSHTTADSQNQFLSQYIVPYLPVSHRPRKDTPRNRTHNQYFVRRADGKLVLVCAMAFQNITGIKRKRLNTISTNFLDTEESPKERRGGARRVGPRTEIEESIISHIQKFPVQQSHYSRNKSVRQYLASGLSITAMYKAWKEIREAEGLRTTKFCTYRRIFRERFNLSFHAPATDLCATCEQCHHLVHAKVDKTTNLLAWKLHKAQAKKMAENNARKYHVRKRGRERKTDQCSYSEGSVLEAIDLVVDKKYSVRHAARLKNIPHKTLDRYVKKHHAGCPKEQMVKKRGVSTILPKELEQAFVDYVKFRAKICYGLTIKECRKAVYTVAESNDLTVPSTWKDNQMAGREWFMQFRVRHPEITLRKPEACSLSRATSFNEHNVGTFFENLEVVLKKYPKLADGTRIYNLDETALTTVQSPEKVLTVKDERQLNSMTSGERGTLVTACCIVCSNGTYLPPAMVFPRVNFKRHMTNGAPIGTLGLAAKTGWMTAALFEEVFDHFITHSCSSPENPSLLIFDNHESHVTIPIIKKARQHGVEILTLPPHCSNKMQPLDITVYKSLKTFFNRGSDIWLATNPGQTISIYDVSKIFGEAFLQSFTPSNIISGFRSSGIYPYNPNVFPPETFLCSFVTDRPAPEESRPAPEDSRPAPEDSPVSAESPDVPVPLPSTSAKTPVEFQIKSSSSTKFKKSPEEVLGFPKAEARKKNNDTRKKRSCILTSTPEQLELEKKQAEKDAKQAAKDERAHKKAKRKLDLDVAPIPRRRGCKPKPAPPKAPQYSSDDDSDGLQHLALSDSDRETFLDLEENNEDWEPTVKEFCAVKFDMNEQQDKIKHYIGQILECDGSAFKIKFLRKTIGENKFVFPNIDDIAWIKRKNMVKKVNEMQMGSTSRQNRIVYIPHATSDFPNLY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -