Basic Information

Insect: Acanthococcus lagerstroemiae
Gene Symbol: -
Assembly: GCA_031841125.1
Location: JAJSSI010000010.1:223043-239741[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 8.6e-08 2.7e-05 24.8 0.0 2 33 443 474 442 482 0.92

2 2 1.4e-05 0.0045 17.7 0.0 2 37 589 625 588 630 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	8.6e-08	2.7e-05	24.8	0.0	2	33	443	474	442	482	0.92
2	2	1.4e-05	0.0045	17.7	0.0	2	37	589	625	588	630	0.85

Sequence Information

Coding Sequence: ATGATTGTTGCCAAGGACAAGGGTATCCGAATTGCCGCGAATATTGAAGACGTCAATGTAGATGATGATCCAGTAAGTTGTGATGAAAACTTAGATGACTCCGAtgtggaagaaaaagaagaaaaggaaaaagaaattatcgaAGAGAAAGCACAAGGGACCAGAAGAGAAGAAGGAATAAATATAGAAAGAAAAAGTGGTCAGGCACATGTGATGGAATGGAGAAACTGTAGAAAGAAGAGCTCGCAGGATTTACGATCTGATGCAAAGAAGATAGCTGGAGAGCTAAGTGCCAAAAAAACTGGCGGAGGTGAAGGAATGTCATCAGAAGTACTTAGTCCTTCAAAGGAGAAGATCATTGCAATTAGTGGTGGACGGACAATTGTCGAAGGTCACTCACACGTGAGCGAGTTCGGTGTGTCCATTGAGTCAGACAGTGATGACGAGGATGAATTCAAGTTATCCTTGAATACAAACTCATTATCATCTATGTCGTTTAAAAgtaaaaatgaaacgaaaagtACTCGTACTCCTGTGAATAAGAAACCTCGTCCAGATAAAAGCAATGTAGAAGCTGTATTGAACCTACACCAGGAAGAGACTAATATCTTCAGGTCGTTTTCTAACTCCGTTGaagGTAACAATGAAACAAAAAGTACTCGTACTCCTGCGAATAAGAAACCCAGTCCAGATAAAAGTAATGCAGAAGCTGTGTTGAACCTACACCAAGAAGAGATCAATATCTTCAGGAATATTACTGAAAACCtcgatgaaattaaaattttattaagtcGTTCAGTTACTGCCCAAGAAAAATCGGCTGTAGCGCAGGAAAAATTGGCACAGGTGTGTCTGGTGATTTGTAAGGGACAATTAGCCATGGTTCCAAAGGGTATCCAGAGTCACCCAGCAACCAGTACTTTAATGGGTGCAGTTCCTAACCATTTGTTGTGTGCTTGGCATGTTGATAAATCGTGGAGAACGAACTTACAAAGTAAAGTTGTTAACCTTGAAAAACGTGCACTTGTGTACAAGGGTTTAAGAGTTCTGCTACAAGAAGTGGCAGTTAAGAGGAAGCGACGAGCGCCTACAACAAGTGCTCACTTGACTGGTACCCCTGAAATGATGGCACGAGAGGAACTCTTCAACAGAAAGCAGAGTAAGATTGCTAAAGCTGCAAAGTTAAGGGTAGATTTCGAAACAAATAAGGTGGCAGTCCAAAAGCCCGAAAAGCCTACGAGTAAGCGCAGAGGTAGGCCGAAACGTGAATGTGACGCACGCCTATCTCATTCTGCAGAAAATGCTAGTAGACGGCAAAAGTATTCGCCAAGAAAGTTGCAAAAGGCCATCGAGAGTATCCAGACTGGCGAACTGACGCCCTACCAATGCAGCCAAAAATTCGGAATACCTCGTACAACCTTAATTTATAAATCCTGTGGTAAAAGACCTCAAGAATACCGGAGACCGGGACCAGAGTCTATGTTGGGTCagcaaaatgaagaaattcttGTAGAATGGATAAGAACAGTTTCAGCGCGCGGTTTCCCATTGACAAAACAAGGACTGTGCTACTCGGCAAATCAGCTCCTGCAAGGAGGTCATGGAAAATTAGTTAATACGTATAATCCTGAAAAAGGTCCGGGAAGAAAATGGTATGAAGGTTTCATGCAAAGACATCCCACTCTGAGTTTAAGAACCCCCGAATTCATACATAAAGGCAGGGCGGCTGCCAGTGAACAATCAATTCGTAAATGGTTTCAAAAGGAAGAAACATTGAATGAGTGCTTTGCACTGATAAGAGCGAAGAAAATTAGTCAGCGAGCTGCAGCTGAACGTTTCCAAATACCGCGTTCAAcgattaaaaataagttgaagCACGTCCACAGTAGAAAAATTGGCCATCCAACCGTGTTTACTGAACTAGAAGAGAAGTGCTTCACACAGCATCTCGTCCAGCTATCGGATTTTCGATTTCCAATCGACTATACAGATTTTCGTATGATTGTCAAAGATTATTTGGACTTGAAAGGGCGAACAGTTAGGCGTTTCAAGAACAATGTTCCAGGAATGGATTTTGTAAAAGGTTGCGGGAGATTCCCCCCAATTGAATCTGGAATTATGATGAAAACGGATAACCCCAGCCAGAAGAAAGTGATCTGCAGACGCggttcaaaatatttcaaatatttttgcaatCATAGCAAGACGTCCACGTCCATAATGTTTTGCGGGAATGCAGATGGTTCTCGTTTCCTGCCACTATATGTGGTATACAAAGCAGAACACCTGTGGGACACATGGAAGAACGGTGGTCTACCTGGGACTAGATATAATCGGACGCGCAATGGATGGTTCAACTTAGTTTCCTTTGAGGACTGgTTTGAGCATCACCTTTTGCAACATGCTGGTATTAAAGAAGGTCAAGGACTGTCTGCCATCATCAGAGATAACCTTGCATCACACATTAATCCTCATGTTCTATGTTTGTGCCACAAATACAATGTGCAGTTTATTTGTTTCCCACCCAGTGCCACTCATCTTTGTCAGCTACTTGGTGTTGCTGTATTTGGGCCACTAAAACGCTATTGGCGCGAGATTTTGCGACAATGGAAGCAGTCCAAGGAAGGATAA
Protein Sequence: MIVAKDKGIRIAANIEDVNVDDDPVSCDENLDDSDVEEKEEKEKEIIEEKAQGTRREEGINIERKSGQAHVMEWRNCRKKSSQDLRSDAKKIAGELSAKKTGGGEGMSSEVLSPSKEKIIAISGGRTIVEGHSHVSEFGVSIESDSDDEDEFKLSLNTNSLSSMSFKSKNETKSTRTPVNKKPRPDKSNVEAVLNLHQEETNIFRSFSNSVEGNNETKSTRTPANKKPSPDKSNAEAVLNLHQEEINIFRNITENLDEIKILLSRSVTAQEKSAVAQEKLAQVCLVICKGQLAMVPKGIQSHPATSTLMGAVPNHLLCAWHVDKSWRTNLQSKVVNLEKRALVYKGLRVLLQEVAVKRKRRAPTTSAHLTGTPEMMAREELFNRKQSKIAKAAKLRVDFETNKVAVQKPEKPTSKRRGRPKRECDARLSHSAENASRRQKYSPRKLQKAIESIQTGELTPYQCSQKFGIPRTTLIYKSCGKRPQEYRRPGPESMLGQQNEEILVEWIRTVSARGFPLTKQGLCYSANQLLQGGHGKLVNTYNPEKGPGRKWYEGFMQRHPTLSLRTPEFIHKGRAAASEQSIRKWFQKEETLNECFALIRAKKISQRAAAERFQIPRSTIKNKLKHVHSRKIGHPTVFTELEEKCFTQHLVQLSDFRFPIDYTDFRMIVKDYLDLKGRTVRRFKNNVPGMDFVKGCGRFPPIESGIMMKTDNPSQKKVICRRGSKYFKYFCNHSKTSTSIMFCGNADGSRFLPLYVVYKAEHLWDTWKNGGLPGTRYNRTRNGWFNLVSFEDWFEHHLLQHAGIKEGQGLSAIIRDNLASHINPHVLCLCHKYNVQFICFPPSATHLCQLLGVAVFGPLKRYWREILRQWKQSKEG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -