Alag019769.1
Basic Information
- Insect
- Acanthococcus lagerstroemiae
- Gene Symbol
- bab2
- Assembly
- GCA_031841125.1
- Location
- CM063111.1:3327238-3346764[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 7.7 2.5e+03 -0.7 0.3 14 21 445 452 443 452 0.93 2 5 1.3e-11 4.1e-09 37.0 0.0 1 39 456 495 456 499 0.90 3 5 6.1e-11 2e-08 34.9 0.0 2 39 511 548 510 551 0.92 4 5 3.8e-18 1.2e-15 57.9 0.0 1 45 565 610 565 610 0.97 5 5 4.7e-16 1.5e-13 51.2 0.1 2 43 618 660 617 662 0.95
Sequence Information
- Coding Sequence
- ATGGCTAATATCGGGCAACACTACTGTTTACGCTGGAACAACTACCAGTCCAATATGACATCAGTATTCTATCAGCTGTTGAGAACAGAGGCATTCGTAGACGTCACGTTGACCTGTAACGAGAACTCTTTGAAAGCTCACAAAGTTGTGCTGTCTGCATGTTCCTCATATTTCCAGAAACTACTGATGGATAATCCATGTAAGCATCCTACCATTATCCTACCTCAGGAGATCGGCTTTAATGATTTGAAGTTCATCATAGAATTCGTCTATCGAGGAGAAATTGATGTTTCGCAGGCTGAGTTACAATCGCTGCTGAAAACCGCCGACCATCTTAAAATAAAAGGCTTGTGCGTGGTGCCCGAAGGCGAAGAAGACGAAATGGAGAACAACGGCGAGTCGATCACTGACGTGAACGTACTTGGTGCTCAGATTCTACAGGACAAATCGCCCAAACAAAAACTAGTTTCTCGCTTCCGCTGCGGTAAATTCCCAGCCCAGATCAAACGTAAACTGCCGCAGGAAATGAACAGCCCGCGTAAATACTGTGCCAAAGAGAATAAGCCTGTCGAACAGCAAGCTGGTGTGCAGTTGATTCAGGCGACCACTATTAACGCGAACGATATACTGGATACGAATAACCATCAACAGCAATATCATAATATGCAAACAGCCAATTGCATCACTGTGGCAACGTCAACGGATGAAGATCGAAAAGACTTGAAACCCGGTGCTAATATTCCGTCCGTCGTTATACTGGATAATCGACACCAGCAACAGTTAGCTGTCTCATCCCCGTTACATTACCTTAGTGGTAATCCTCAAACTCAACAGTGTCAGCAAGCTGAGAAAATCATTATGACTAGCCCGTCGCCCATTATGAATTCATCGTGCACAACCCTTACCACCTTACAACCTCAACCTCCCTTAATTTTAGATCAAAATTCTCATCAACAGCACTTGAATCAACAAAGAGCTACTAATGAAGAAGATAAAACGAGAGATGTAGAAATAATGTCTGAAACTCAGCCATTGGGTCCCACTGCCACTCCAGTTCATTGTCATTCCATGGAAATCCAGCAACACAGTCCGACTCATCGTGATATTGCCGTTGACACTTCCGGTATGCAATCAGAGGATATTAAAGTGAAATTCGAAACGTTACGCACCATGGATCAGACCTCCGATAGTATGGATACAATGGATAATCATATGTCCGAACATAGTATGAACGACGACGACCACACAATGCAAACTATGATGATAACTCCGGAATTACTCGGGTTGATACCCCCTACATCGTCAGCTCCGCCATCAGAAGTAGGAAGTGATAACGGGAAAATGTCGATGTCGAAAAAAGACTGGACTCAAGAGGACATGGACGCTGCATTAGACGCCCTTCGAAATCATCACATGAGTTTGACCAAAGCATCGATTACTTTCGGTATTCCATCGACGACTTTATGGCAAAGAGCACACCGGTTAGGAATCGACACCCCGAAGAAAGATGGACCGTCGAAGTCGTGGAATGAAGATGTGTTAAATGTTGCTCTAGATGCTCTGCGAACTGGATCGCTCTCAGCTAACAAAGCGAGCAAGGCTTACGGCATTCCTAGCAGTACCTTGTATAAAATAGCCCGGCGAGAGGGAATTCGACTGGCAGCACCATTCAACGCAGCACCAACTACGTGGACGCAAGACGACCTGGAAAGGGCTCTCGAGGCCATTCGTACGGGACAGACCACGGTGCAGAAGGCGGCTACTGAGTACGGTATACCCACTGGAACGCTGTATGGTCGCTGTaaacgcgaaaaaattgaattgtctCGAAGCAATCCAACGCCGTGGTCGCAAGATGCGATGAGTGAAGCTTTGGAGGCTATAAGgttGGGTCAGATGAGCATCAACCAGGCTTCGATTCACTATAATCTGCCATACTCATCACTGTACGGACGTTTTCGTCGCGGTAAATACGAAGCTGACCTTTCGGAGCACGAAGACGATGCATCTAATGTGGAAATGCAATCGTCCTCTCAGCATTCGATGATCCAGCACGCCGATATGCAGACAGaacagcaacaacagcaacagCAAGCCGCTCAACAACAGTCGCAGCAACAGCAATCCACCATACAACCACAGATCATGCTTCTGCAGTACCAGCATGCCCCGGCCCCCCACATCCAAATGTATCAGCCGGCGGCCCCTAGTTGA
- Protein Sequence
- MANIGQHYCLRWNNYQSNMTSVFYQLLRTEAFVDVTLTCNENSLKAHKVVLSACSSYFQKLLMDNPCKHPTIILPQEIGFNDLKFIIEFVYRGEIDVSQAELQSLLKTADHLKIKGLCVVPEGEEDEMENNGESITDVNVLGAQILQDKSPKQKLVSRFRCGKFPAQIKRKLPQEMNSPRKYCAKENKPVEQQAGVQLIQATTINANDILDTNNHQQQYHNMQTANCITVATSTDEDRKDLKPGANIPSVVILDNRHQQQLAVSSPLHYLSGNPQTQQCQQAEKIIMTSPSPIMNSSCTTLTTLQPQPPLILDQNSHQQHLNQQRATNEEDKTRDVEIMSETQPLGPTATPVHCHSMEIQQHSPTHRDIAVDTSGMQSEDIKVKFETLRTMDQTSDSMDTMDNHMSEHSMNDDDHTMQTMMITPELLGLIPPTSSAPPSEVGSDNGKMSMSKKDWTQEDMDAALDALRNHHMSLTKASITFGIPSTTLWQRAHRLGIDTPKKDGPSKSWNEDVLNVALDALRTGSLSANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTQDDLERALEAIRTGQTTVQKAATEYGIPTGTLYGRCKREKIELSRSNPTPWSQDAMSEALEAIRLGQMSINQASIHYNLPYSSLYGRFRRGKYEADLSEHEDDASNVEMQSSSQHSMIQHADMQTEQQQQQQQAAQQQSQQQQSTIQPQIMLLQYQHAPAPHIQMYQPAAPS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00005683;
- 90% Identity
- iTF_00005683;
- 80% Identity
- iTF_00005683;