Alag023269.1
Basic Information
- Insect
- Acanthococcus lagerstroemiae
- Gene Symbol
- kn
- Assembly
- GCA_031841125.1
- Location
- CM063111.1:62750147-62776269[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.5e-31 1.8e-26 93.7 0.0 11 94 31 109 22 117 0.86 2 2 0.072 1.3e+03 -1.7 0.1 418 475 136 194 115 209 0.47
Sequence Information
- Coding Sequence
- ATGTTCCACGGACTGCATCACCATCATCAGGACACCGGCGCCGGGTTGCATCACCACCATCACCATCAGCCGCGGGGACCGGTGACCGGCAGCCTCAAGGATGAGCCCATATCCAGCACGCATCAGCTGCTGAGCGCCAGGTCGTGGGTGCAGTCTGGAGTCGATCACGCCAGcgtCGGCGTCGGCAGAGCTCACTTCGAAAAGCAGCCACCGAACAACTTACGTAAAtcgaatttctttcattttgtgatAGCGCTGTACGACCGCTCCGGACAGCCCATCGAGATCGAGCGGACTGCGTTCATCGGATTCATCGAAAAAGATCAGTTCAGGGTCCTTCGGAAGCTGCTGGTTCGAAACATACCGGGGAGCCCCAGTAATTTGCCACTTGACTTTGCTTTGAAAGCGCTCTACGATAGCCAAGTTGGAGTCCTTGGCTACGCCTCACAGTTGAATACGCTATGTCACGCTCAGATTACGATGTTAATCAGCGTCTTGCACTCCAATTCAGTTTCTAGCGGGAGGAAACCGAATCGCAGAAGACGAACAACGGCATCCACTACAGATTACAACTGCTGTACACGAGCGGTAAGTTCTAAGTTCACTTCGTGCAAACCTAATTCACAAATGAAAACGAACGATTTACGAGTACGAAACCGAGAAAGCTTTAAAAAACGAATGCGCTGTATTTGGCGACGAGGTTAa
- Protein Sequence
- MFHGLHHHHQDTGAGLHHHHHHQPRGPVTGSLKDEPISSTHQLLSARSWVQSGVDHASVGVGRAHFEKQPPNNLRKSNFFHFVIALYDRSGQPIEIERTAFIGFIEKDQFRVLRKLLVRNIPGSPSNLPLDFALKALYDSQVGVLGYASQLNTLCHAQITMLISVLHSNSVSSGRKPNRRRRTTASTTDYNCCTRAVSSKFTSCKPNSQMKTNDLRVRNRESFKKRMRCIWRRG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -