Alag030106.1
Basic Information
- Insect
- Acanthococcus lagerstroemiae
- Gene Symbol
- retn
- Assembly
- GCA_031841125.1
- Location
- CM063113.1:56806140-56838378[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.7e-19 2.5e-15 57.6 0.0 17 89 68 138 59 138 0.92
Sequence Information
- Coding Sequence
- ATGGAGGGGAGACGGAGGAAGGAAGATGTAAAGAGAGTATTTCGGTCGAAAGCGAACCATCAGCAGCTCGCCAGCGTCCATCGTCGCAGTTCCCGATTCGACGAATCGGAGTCGACTCCAATGGCGGACGAATGGAAACTTAGCCTGTGCAGATCGACGGGCACGCAGCCGCGTCGGGGTCTGCGAACGAGTGCACACGCCGAAACTCCTGTCACTAGGCTACCGATTATGGCGAAATCAGTGCTTGACCTTTACGAGTTGTATAAATTGGTGGTGCAACGTGGCGGCCTCGTCGACGTCATCAACAAGAAACTGTGGCAAGAAGTGATCAAAGGCTTGAATCTTCCCTCATCAATAACCTCAGCCGCGTTCACGCTACGCACACAGTACATGAAGTTCCTATACCGCTACGAGTGCCACAAACTAGGCCTGAGCACGCCGGTTGAGCTGACGACGGCCATCGAGGGCAATAAGCGCGAGGGCCGGCGCAGCAGTTACTACGGCGACTTGGGCCAGATGCAAAGTCCGAGCAGCAGTAACGGGCCCAGCAACAACAGCCACCAGCCGGGAAGTTCGCTGCACCACAGCCAGTCTCAAGTTTCGCCGGTCAGCGTGGCGACGACGTCAACCACAAACGCCGGTAGTAATCGACTTCAAGTTAACGGTCATTCCAACCAGTTCGGCAGTCTTTCTGGCAACGCATCCATTCCCAACGCGCACGGATTATCTTCTTTAGTTCTGCAAGGCGCTCCGGTTCCAATCCAACCGGACCAAAGGATTCTAGAATATATCAAGCTAGTGAATACCAGAATGATGAATAATCCTCCGATAAACGGAGCCGGTTCCTCGCCAGAACTACCCGAAGCAAGCACTCTCAGTAGTCTGGACATGACGCAATTAGCGCTGTGGAATATATATAATGGCGCCTTGAAACCACCGATGCAGCAAAATCCAGTATTACCATTCCAGCCGGCTAGACCGCCCAGTCAGAATTCCGCCGCAGAAGGGCCCTTGGACTTGAAAAGCAGTCGTAAGGAGGAGTCGCCGACGCTGAAACGTCCAGCTCCTGAAAACGACGAGGAAGAccaaaatgaaactgaagaaaCGGACAGTGATTCTGACGAAGAAGACGGTGACTGTTCGATGCCAACGAAAAATTCTAGTCAAGGTAAGGGTCATGTTTTGGAATCGCTCGTTTGA
- Protein Sequence
- MEGRRRKEDVKRVFRSKANHQQLASVHRRSSRFDESESTPMADEWKLSLCRSTGTQPRRGLRTSAHAETPVTRLPIMAKSVLDLYELYKLVVQRGGLVDVINKKLWQEVIKGLNLPSSITSAAFTLRTQYMKFLYRYECHKLGLSTPVELTTAIEGNKREGRRSSYYGDLGQMQSPSSSNGPSNNSHQPGSSLHHSQSQVSPVSVATTSTTNAGSNRLQVNGHSNQFGSLSGNASIPNAHGLSSLVLQGAPVPIQPDQRILEYIKLVNTRMMNNPPINGAGSSPELPEASTLSSLDMTQLALWNIYNGALKPPMQQNPVLPFQPARPPSQNSAAEGPLDLKSSRKEESPTLKRPAPENDEEDQNETEETDSDSDEEDGDCSMPTKNSSQGKGHVLESLV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -