Aori029994.1
Basic Information
- Insect
- Acanthacorydalis orientalis
- Gene Symbol
- -
- Assembly
- GCA_034766995.1
- Location
- CM068321.1:36239717-36245266[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.00019 0.027 16.1 0.3 2 23 830 851 829 851 0.96 2 10 0.21 30 6.5 3.1 2 23 860 881 859 881 0.97 3 10 0.11 16 7.4 0.9 2 23 904 925 903 925 0.89 4 10 0.00071 0.099 14.3 2.1 1 23 929 951 929 951 0.97 5 10 0.18 26 6.7 0.7 1 23 974 996 974 996 0.90 6 10 0.024 3.4 9.5 3.5 3 23 1000 1020 999 1020 0.97 7 10 0.057 8.1 8.3 1.6 3 23 1056 1077 1054 1077 0.91 8 10 4.7e-05 0.0067 18.0 3.5 2 23 1178 1199 1177 1199 0.97 9 10 0.00044 0.062 14.9 1.2 1 23 1232 1254 1232 1254 0.98 10 10 0.00031 0.044 15.4 2.3 1 23 1260 1284 1260 1284 0.91
Sequence Information
- Coding Sequence
- ATGTCCGTTGAAACGGACGGGGTCGTATGGCAAGACAATTATGAAGAGGTTGTGACTTACGAGGAGGCCATCAGTATCAATGACtcttttaacatttcaaatgGAGACGACGTAAATGACAATAACGAGACGTACGAAACGGCTGTGGAAGATGATTCTCAGTATTATTCGATTGTGAATGAAACGATTGTCGGCGACAACGATAACAGTTTCATCGAGAATATTTCCGGTGTCGGTTTAGATAACGGTGATAAAACTAACTGCCACGGTGACATCGATGAAACGCTGGTGCCGAAAAACGTATCGGAGGATTGTAAAGTATAcgaagagaataaaaatatcttagttAATGAAGAAATCGTACTGTATAAGATCGAAGGTTCGAACGAGTTATATGCTGTACAATTCGCTACCGACGAAAGCGggaatttacaaaaataccaGTATCAAGTCaggGCAACTGAGGATGGTCAATTCGAAGCTGTGCCTGGAACAATCGAATTGCAGCCCGAcacaaacaatgaaaatatttacaaagtgaATTCAGAAACGAATTACAAATCAGCGGACCACAAcaattatgaaatgaatttacaGGAACATTTCATAACGACGATTCTCCAAGAACCGACCATCCCCGAAAATATGAACGAAGAAACGAACTGCGCGTACGAAAACAGCAACGATTTTCATTCTGAGAGTGAACTGAACGAATCGCAGATCGAACAGCTGGAGTCGGTCGATACTTCGTCGGGCGATAACATGCGTATCGAAAATCAAGAGatgaaaaatctatatgaagAAGGAATGTACGAGGAGTATTTAGAGGATTCGGATGGAAATCCGAGCCAGTCATTGCCTGAATATTCGAACCTGAAGTTTTTCGAAACGGAAAACGGAGTCAGCTATGCAGAGGCCGTGCCGCTAGATGAGCTCAACGTGAAGATAACGGACCAGATAAAATGCAATTCGATCGAGACGGACGTCGAAGAGCGGTTCGAAAACGTCGAACCGATAATCGTAAGGAAATCAAATAACGGAACCGAACTCCACGTCCTCTCTGAAATGATTATACCGAAGTCAGTGAAAAAAAGTAATCAGAACTCGACATTCACAAAACAGATCCTACCGAAAAATGATCAGATCTCGGCTCTCAATAAATTCAAGGCGAATATTATATCTATCGTACAGGACAACGGAATAGTGAAGAAGAAAGTGCCTGCCATGACGCACGTGTTGAATAAAGGGAAAACGAATAATGTCTTCGACAATTGTGACTTTGACATCAAGCCCGTGTCCGCGACGAGAAATATAATCAATtcgaaaagtaataaaaaaatgactttcCTCATCGTCAGTCGAAACACGGATCCCAAATTGAAAGAAGACATCCAAAGGACTCCGGATCTGTTTAAGAATTCGCGCAGCATCCTCAAACCGACGTTGAACAACATCCGCAAGAATAACGCAAACATGAATTACATAAGGGTCGAACCGAAAGTTTATAAAGATAGTGCGGTGCATTTTTCTAAAGTTCCTAATTTATGTATGGCTCGAAACATTACGAAGGACGTGCTATCCGAAAAGGTCGGTCCGGTCTTCGAcgacaaattaaaattagaatcgAATTCAGTGCCGAAAGAACCTGAAAGCAAGGTATCGAGACAGCCAAGGAAACAGACGATCAAGCCCGTCGACAGGGTCGGCtcagaaataattattcagcCGTCCGAAGACGATGTGGAGATCATCACGTATGATCTCGAAGTCAGCGACGGAGAATACACGCCGAATAAAGTGAAAACGAGGAAGAGAAAAGTGTCTAAGAAGAGAGGGAAGAAGCCGAAAACATTAGAGATTATCCTCAGCGACAATGATGATAATGAAGAAGATTTAAAAACTAGACAGAATAAATCGAGAATCATAGAAGATGATATCAAGTTGTTGGACGACGAGGAGAGCGTGCCGAAAAATGAGAAGAAGAGTTCACGGTCGATCGTCGGGGGTACCGCGAATAGTAAAAGAATCTCAGATGATTGCAACGAGCCAGATAACGAAGCAGACGGGTGTTTCGTTTCCGATCCGGAGCGACTTACGGAAACAGAGAACGTTTCTAGTCAAGTGAAAGATTTAAAGAGTGCCGAGAGTGGTTTAGATCTAAACAATGTCATGGAAAATGTTATGAGTATCATGGAAGAAATACACGGCGAACAGGACAACGATAAACATAAGATGGAGATAGAAGTAGACGTGAAAGAGCCTGAACATTCTGAAACGGATCTCCTCTTACTGTTAGAGAACACAAATAGTCCGAGTGTCGAGGAGAAAGTGGAACAACCAGAGAAACGTACCGAAATCTCGGCCCTTTTGAAGTCGGAGAGTGCGGAATTGTTAACGAGAGCGAGTCGAGCGGACGTCGACCGTGTGAAACTGTTGCGAAAGAACGCGGAGAAAAACAACGCGCTCCCAGAAAACAAGACACAGTGGAAGTGTTCTAAATGTCCGAAATCGTTTCCGAACGAAATCGCGCTCAAGACACACTCGCAAGTGCACAAAACGCGAAAGAGAAAATACTGGCAGTGCGAGAAATGCTCGAAGAAGTTCCTCTTCCAACGTTTTTATGACAACCACATGAAGACGCACGaggaaaacaaaaaaagtacaaaCGTGTCGGAGTCGTCGAGGATTCCGATAGTGGACGGCTCGTTGACGTGCGACGTGTGCTCGAAGAAATTCACGAGTGTGTCCGTGTTCGATGCCCACAAGTCTTTTCACAGAAAGCGGTACAAATGTAATAAGTGTCCTCAGGTGTTTTCCACTAGATCGAAACAATTAGTCCATTCTAAAAGCCATTCGGCCAGTAGATCGACTGGCCTGTGCCGACGGAACAGTTTGAATGCTGAGTCGTCGCACAAGTTGTTCCACTGTGATATCTGTGCAAAACCATTCCGACAGCTGAGTATTATGATGATACATCGAGAACAGCACAAGATGTTCTGTTTGAATTGCGGCAAGAAGTTTCAGTTCAAACACCTGTTGGACGAACATGTGCGACGGCACTGCTTGAACAGCTCGAATTCGAAGAAGAAGAAGCGGAATTCGCTGGTCCGAAGTTCGCTCTCGCGCCCCGCTCTCCAGAAATCGAATACGGATAAAAAGACGATCTGCAATATCTGCAATCGATCATTTAAAACTGAACTCGCGTGTCAAGCGCACGTTAAAAGCTCACACAGCAAGACACCCGCGAAGCATTTAAGTAGAAAATTCAACGATTCCGACAAACACTCGAACAGGCCCGTGATCAAGCAGCCGGAGAATACGTCCAGTTTCCAAAAACACAAAACGTTGAAACGGTTATTACCGAAcgataaaaaaacaagtttcgCGAGGGATTCGAAGAAGGAGAACGAAAATTGTTTCAGCACATCTGCCAGAAACATCAAAGAAAAGAATACCGATTCGAGTGAGTCGACGACGGAGAGGAGGCAATCGGTAAGGAAGCAAGTCCCGAGTCAAAAAGTAACTGCTCTGAAGTGTAATTTGTGCGACCTCAGCTTTAGTACGCACACCGGCTTATTCAGGCATACTCGTACGCATTCAGCCGGCGTGTCATCGTTATTCGTTGTTGTAATTTCTGTACGCGAAGTGTGCGGCCTTCGGTCGCGAAAAGGCTCCCCATCCCCCGaaaataaacacaaatgtgATCACTGTGATATTGTACTGGAAACAAAAGATTTACTCGTCTCGCACATTCAAAGCCACATGTCTAGCGATTTTTTCGATTGCGAAACGTGCAGTCAGCACTTTTCCACCAAAGAATCATTAGCCAGGCATATAAACAAAACGAACCACAAATACTCGATCGAGGGCCGACAGACGTCCgcgaaaaaaatcaaaatgctGAAAAGAAAAATCGCGCATGGCGGTGTTCCGCTGTCGACGAAAATCCAATCGTTCTTAGTGAAAAGACAGAAGTTATAG
- Protein Sequence
- MSVETDGVVWQDNYEEVVTYEEAISINDSFNISNGDDVNDNNETYETAVEDDSQYYSIVNETIVGDNDNSFIENISGVGLDNGDKTNCHGDIDETLVPKNVSEDCKVYEENKNILVNEEIVLYKIEGSNELYAVQFATDESGNLQKYQYQVRATEDGQFEAVPGTIELQPDTNNENIYKVNSETNYKSADHNNYEMNLQEHFITTILQEPTIPENMNEETNCAYENSNDFHSESELNESQIEQLESVDTSSGDNMRIENQEMKNLYEEGMYEEYLEDSDGNPSQSLPEYSNLKFFETENGVSYAEAVPLDELNVKITDQIKCNSIETDVEERFENVEPIIVRKSNNGTELHVLSEMIIPKSVKKSNQNSTFTKQILPKNDQISALNKFKANIISIVQDNGIVKKKVPAMTHVLNKGKTNNVFDNCDFDIKPVSATRNIINSKSNKKMTFLIVSRNTDPKLKEDIQRTPDLFKNSRSILKPTLNNIRKNNANMNYIRVEPKVYKDSAVHFSKVPNLCMARNITKDVLSEKVGPVFDDKLKLESNSVPKEPESKVSRQPRKQTIKPVDRVGSEIIIQPSEDDVEIITYDLEVSDGEYTPNKVKTRKRKVSKKRGKKPKTLEIILSDNDDNEEDLKTRQNKSRIIEDDIKLLDDEESVPKNEKKSSRSIVGGTANSKRISDDCNEPDNEADGCFVSDPERLTETENVSSQVKDLKSAESGLDLNNVMENVMSIMEEIHGEQDNDKHKMEIEVDVKEPEHSETDLLLLLENTNSPSVEEKVEQPEKRTEISALLKSESAELLTRASRADVDRVKLLRKNAEKNNALPENKTQWKCSKCPKSFPNEIALKTHSQVHKTRKRKYWQCEKCSKKFLFQRFYDNHMKTHEENKKSTNVSESSRIPIVDGSLTCDVCSKKFTSVSVFDAHKSFHRKRYKCNKCPQVFSTRSKQLVHSKSHSASRSTGLCRRNSLNAESSHKLFHCDICAKPFRQLSIMMIHREQHKMFCLNCGKKFQFKHLLDEHVRRHCLNSSNSKKKKRNSLVRSSLSRPALQKSNTDKKTICNICNRSFKTELACQAHVKSSHSKTPAKHLSRKFNDSDKHSNRPVIKQPENTSSFQKHKTLKRLLPNDKKTSFARDSKKENENCFSTSARNIKEKNTDSSESTTERRQSVRKQVPSQKVTALKCNLCDLSFSTHTGLFRHTRTHSAGVSSLFVVVISVREVCGLRSRKGSPSPENKHKCDHCDIVLETKDLLVSHIQSHMSSDFFDCETCSQHFSTKESLARHINKTNHKYSIEGRQTSAKKIKMLKRKIAHGGVPLSTKIQSFLVKRQKL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -