Basic Information

Insect: Acanthacorydalis orientalis
Gene Symbol: salm_2
Assembly: GCA_034766995.1
Location: CM068323.1:25629107-25633096[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.11 15 7.4 0.1 2 23 7 28 6 28 0.97

2 15 0.063 8.9 8.2 1.4 1 23 715 738 715 738 0.93

3 15 0.064 9 8.2 1.0 3 23 817 838 816 838 0.95

4 15 0.00036 0.05 15.2 0.8 1 23 846 868 846 868 0.99

5 15 0.00015 0.021 16.5 2.1 2 23 871 892 870 892 0.97

6 15 0.0082 1.2 10.9 4.1 1 21 898 918 898 920 0.94

7 15 3.6e-06 0.0005 21.5 5.0 2 23 927 948 926 949 0.95

8 15 2.3 3.3e+02 3.2 3.0 5 23 962 980 961 980 0.94

9 15 0.00016 0.022 16.4 2.2 3 23 987 1008 986 1008 0.97

10 15 0.33 46 5.9 0.2 2 23 1024 1044 1023 1044 0.93

11 15 5.1e-06 0.00071 21.0 1.1 1 20 1050 1069 1050 1072 0.92

12 15 0.00017 0.024 16.2 0.7 1 23 1080 1102 1080 1102 0.99

13 15 0.0013 0.18 13.5 6.9 1 23 1108 1130 1108 1130 0.98

14 15 2.6e-06 0.00037 21.9 3.4 1 23 1136 1158 1136 1158 0.98

15 15 0.0021 0.29 12.8 6.0 1 23 1164 1186 1164 1187 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.11	15	7.4	0.1	2	23	7	28	6	28	0.97
2	15	0.063	8.9	8.2	1.4	1	23	715	738	715	738	0.93
3	15	0.064	9	8.2	1.0	3	23	817	838	816	838	0.95
4	15	0.00036	0.05	15.2	0.8	1	23	846	868	846	868	0.99
5	15	0.00015	0.021	16.5	2.1	2	23	871	892	870	892	0.97
6	15	0.0082	1.2	10.9	4.1	1	21	898	918	898	920	0.94
7	15	3.6e-06	0.0005	21.5	5.0	2	23	927	948	926	949	0.95
8	15	2.3	3.3e+02	3.2	3.0	5	23	962	980	961	980	0.94
9	15	0.00016	0.022	16.4	2.2	3	23	987	1008	986	1008	0.97
10	15	0.33	46	5.9	0.2	2	23	1024	1044	1023	1044	0.93
11	15	5.1e-06	0.00071	21.0	1.1	1	20	1050	1069	1050	1072	0.92
12	15	0.00017	0.024	16.2	0.7	1	23	1080	1102	1080	1102	0.99
13	15	0.0013	0.18	13.5	6.9	1	23	1108	1130	1108	1130	0.98
14	15	2.6e-06	0.00037	21.9	3.4	1	23	1136	1158	1136	1158	0.98
15	15	0.0021	0.29	12.8	6.0	1	23	1164	1186	1164	1187	0.96

Sequence Information

Coding Sequence: ATGAATTCGGAAAACATCACCTGTCCGGTGTGCACGTTGTACCTCCGCAACGGGATCTCGCTCGAGCAGCACCTGCAGACCCATCCGAAAGATCAGGTGATCGAAGCGCTCGTCGATCTGACGAACAGGAAGTCTGCGGGCTTCGTCCCGAACGGGGACCACAGAAGAAAGCAGAGCCAGTATGTCGACTGTCAGCCTACGGACACCAAGACCTACGCCCCGCCCCCGTGGCACCAGAATCGAATGGTCGTCACGAACCCTCAGGTCGTGCTGCCGATGCAGACGCTGAGCGTCGCGAACAACCAGTCGATATTCTACCAGCAGTTCATGAGCAGCGTCGGCGCGCCCGGATTTCCTGACACGATGGTACCGCAGTACGTCAGCTTACCGAACGTTTTCAACCAGCACATGCTGATGAACCCGTGCATGTACCAGCAGCAACAGCAGCAAGTGCAGATAGTCTCGGGCCCGCTCGTGCCGCTCGGGCGCACGTTCGACACCTCGCCCGAGATGGTGATGTCGCCGATCGTGGCCGAAAACGTTTCCGTCTCGGGTTCTCGAGCGACGATGCCCGTCCGGGAAGCGGAGCAGTCGGCCGTCGAGTCCGTCGACGTTTCCCCGCCGCCACCGTCGAGAAAATCGCCAGAGATAGAGACGAGATCGAACGACGTGCCACGATCGGTCATAATTACAGAGATCGGTATGGAAAACGCGGAGAGCGCGCCGTCGATGGGCGCGACGTCTAAGAGCGCTACGTCTAAGAGCGCTACGTCGAAGGCCGCGTCGTCGAAGGCCGCGTCGTCGAAGGCCGCGTTGTCGAAGGGCGCGTCGTCGAAGGGCGCGCCGTCGAAGGGCGACGTCGTAAAGGAGTCGAGCGAACAGCGGTCGTCGGTCGCAAAGTCTCAAAAGTCAGTGCCGGAGAAACGGCAAGACGATTCGTTCGAAGTGATTTTCGACAAAATCAACCAGAACCCGGATCTCGCAATAGCCAAGACGGACAAGTGCCGGTGGCCGAAGGGCGACGCCGTACCGAACCCGCCTCAAGAGTTGTACACGATCAGCACGATCGGTCTGAGTCTGAACGAGACCGCCGAGACGATCACGCCGGATATAGTCGACGACTCGCATTACGAGTACCTGGAAAAGAGGCCGCCGGAGCGCTCGTCGACGCCCGTCGTGCCGACGAAAATAATGTTCGATCCGATGCCGGAGGATTTCACGAACTCGATTCTGCCGCACCTCGACACTTCGCTCGACTTGCAAATCGGACCCGAAAAGAACGTCTCGTCCCGCGACCGCGCGCAGAAGAACGAGCAAACCGACGACGATTACAAAGAAGACAAGTCCGACTTCAACGGCTCGATCCTCTCTGACCGGCTCAAGTTCGATCCGAACGAGTCCGCCCACTCGGACGTGATCATACTACAAGAAGAGGTGATCCGGCTGCCGCTGATCGCGCCGTACGTCGAGAAGGACGAGAGCGTCGAGAAGGCCGAGTCGACGGAGGTCGCGGACATATTCGACGGCGACAACGTCGCGCCGTACGACGGGGTCGGAATCGAGAAGGAGCGCAAGATCAAAACCGAAAAGACGGTGTTGTCGTTCGCGTCGTCCGTGCAGGAGTCGATCCTGCCTGACTCGGACATCGCCGCCTACGAGTCCGTCGAGTCGATGAACGTCGTCGAGTTCGACGGGATGAAGCTGGTCATTCCCGGCGAGCTGATCAACACGAAGGCGCAGACGGCCGAGAGGAACTTCCATTACGGCGGCGACAACGTGGGGGAGAAGTCGCCGGTGCTGCTGAACATCGGCGACATCAACAAGAGTCCGTACGTCGTCGACGCGGAAGGACAGGAGGAGAGCGTCTCGGCCGAGAGTCTCAACATCCGCGCGAATGAGAGGATGCCGCCGAAAGGAGAGCTGTCCGAGCAGGAGAGCAACGGAGCGAGCGAGAGCGGATGGGGCAGGGAGGGCAGCTCGGGCATATCGACGTCGTACGACTTGCTGGCGCGCGAAAGTTGGGAAGCGTCGGACTGTTCCGACACTGAGGTGCCGCCGCTGCAGAGTCGCGTTCCGCTGCTCGATTGCTACGTCGGCGAGACGAAGAGCCTCGCGCCCCCGCCGGCCGCGTCGCCGCGGCACTACAAATGCACCGTGTGCAACGAGTCGTTCCCGTGTCCGAAAGAGCGGCGCGTCCACCAAGCGAAAGAGCACGGCTCGGACGGTCAGCAGCAGACGGTCATACGTTCGCTGAAGACAAGAGAGCGGAAGGTCGTCAAGATCAAGTCGGAGGAGAGCGAGGAGACGTGCGACGACACGTTTCCGAAGGGGTTCAAGATGGAGGAGGACGGCGACGTGAGTAAGATCGAGCTCGACTACACCGGCAAGATCGCGAGACCGTCGTCCGCCGACAACAAGGAGTACGATCTCGCGATGATGAAGGCGATGTGTCGCGTGTGCAACGTCGAGTATCCGACGATGAAGACGCTGCAGAAACACCATCGCGCGGTGCACAAGGAGGAGCCGACGCCGAAGTACAAGTGCGCGGTGTGCAATCAGTCGTTCGCGTTCGACTCCAAGTTCACCGAGCACCTGCGGATACATCCGCTCGAGTGCACGCTGTGCGGCAAGTACTTCTACCGTCGCCAGAACATGAAGCTGCACCTGAAGCGGCACTTCGGCATCAGGCCGTTCAAGTGCGAGATGTGCAAGAAGTCGTTCATCACGAAACAGAAGATGAACGAGCACGTGAACTGCCACACCGGCAACGCGCCGCTCAAGTGCACGATTTGCGACGAGACGTTCCGCAGGCACTCGAACCTGATACAGCACCGCAACACGCACCACTTCCACACGAAGAGGAAGTACAAGGACTTCGCGTGCCACTGCGGCGAGGTGTTCCACTCGAAGAAGAAGTTCGTGTGGCACAGCGAGATACACGACCCGAAGCCGAAGGCGTGCGCGCACTGCAACGAGAAGTTCGTGCACATCGCGAGCCTGACGAGGCACATGCGCAAGGCGCACAACCACCACTACGTTCCGGACGAGAAGCGCAAGGAGGAGAACGTCGAGTGCAAGGTGTGCAAGGGCATCTACCTGCGCACGTCGCTCGAGGTGCACATGAAGACGCACTCGGGCGTCAAACCGTACTCGTGCAACATCTGCAACAAGGTGTTCTCGACGAAGTGGAATCTCAAGTTGCACCGGTGGACGCACGCGTCTCGCGCGTCGAAGCCGTTCAAGTGCACGCTGTGCAAGAGCGCGTTCATCAGACAGCCGGACTACACGGCGCACATGAACTCGCACCGGAGCGTCAGGCCGTACACGTGCAACCATTGCGGCCGCCAGTTCATCCGCAAGTACAATTGCCAGAGGCACGTGAAGGAGCACGAGCAGGACAAGTCGTTCAGCTGCAGCGTGTGCGGGAAGACGTTCCACAGGTCGTACTACCTGAAGGAGCACCTGCGGATACACAGCGGCGCGAGGCCGTTCTCGTGCCACATCTGCGGCAAGATGTCGGCGACGAAGTCGAACCACAACAAGCACGTCCGGATCCATCACGCGCGCGAGTCTGTCAGCACCGAGGGCTGA
Protein Sequence: MNSENITCPVCTLYLRNGISLEQHLQTHPKDQVIEALVDLTNRKSAGFVPNGDHRRKQSQYVDCQPTDTKTYAPPPWHQNRMVVTNPQVVLPMQTLSVANNQSIFYQQFMSSVGAPGFPDTMVPQYVSLPNVFNQHMLMNPCMYQQQQQQVQIVSGPLVPLGRTFDTSPEMVMSPIVAENVSVSGSRATMPVREAEQSAVESVDVSPPPPSRKSPEIETRSNDVPRSVIITEIGMENAESAPSMGATSKSATSKSATSKAASSKAASSKAALSKGASSKGAPSKGDVVKESSEQRSSVAKSQKSVPEKRQDDSFEVIFDKINQNPDLAIAKTDKCRWPKGDAVPNPPQELYTISTIGLSLNETAETITPDIVDDSHYEYLEKRPPERSSTPVVPTKIMFDPMPEDFTNSILPHLDTSLDLQIGPEKNVSSRDRAQKNEQTDDDYKEDKSDFNGSILSDRLKFDPNESAHSDVIILQEEVIRLPLIAPYVEKDESVEKAESTEVADIFDGDNVAPYDGVGIEKERKIKTEKTVLSFASSVQESILPDSDIAAYESVESMNVVEFDGMKLVIPGELINTKAQTAERNFHYGGDNVGEKSPVLLNIGDINKSPYVVDAEGQEESVSAESLNIRANERMPPKGELSEQESNGASESGWGREGSSGISTSYDLLARESWEASDCSDTEVPPLQSRVPLLDCYVGETKSLAPPPAASPRHYKCTVCNESFPCPKERRVHQAKEHGSDGQQQTVIRSLKTRERKVVKIKSEESEETCDDTFPKGFKMEEDGDVSKIELDYTGKIARPSSADNKEYDLAMMKAMCRVCNVEYPTMKTLQKHHRAVHKEEPTPKYKCAVCNQSFAFDSKFTEHLRIHPLECTLCGKYFYRRQNMKLHLKRHFGIRPFKCEMCKKSFITKQKMNEHVNCHTGNAPLKCTICDETFRRHSNLIQHRNTHHFHTKRKYKDFACHCGEVFHSKKKFVWHSEIHDPKPKACAHCNEKFVHIASLTRHMRKAHNHHYVPDEKRKEENVECKVCKGIYLRTSLEVHMKTHSGVKPYSCNICNKVFSTKWNLKLHRWTHASRASKPFKCTLCKSAFIRQPDYTAHMNSHRSVRPYTCNHCGRQFIRKYNCQRHVKEHEQDKSFSCSVCGKTFHRSYYLKEHLRIHSGARPFSCHICGKMSATKSNHNKHVRIHHARESVSTEG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -