Aori024571.1
Basic Information
- Insect
- Acanthacorydalis orientalis
- Gene Symbol
- ZFX
- Assembly
- GCA_034766995.1
- Location
- CM068319.1:39321674-39324271[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 7.9 1.1e+03 1.6 0.5 1 12 383 394 383 395 0.91 2 13 3.3 4.7e+02 2.7 2.4 3 12 535 544 534 554 0.84 3 13 0.00041 0.057 15.1 5.3 1 23 560 582 560 582 0.99 4 13 0.0012 0.17 13.6 2.9 1 23 588 610 588 610 0.95 5 13 1.2e-05 0.0017 19.9 0.3 1 23 616 638 616 638 0.97 6 13 4.9e-06 0.00069 21.1 1.0 1 21 644 664 644 665 0.96 7 13 0.0012 0.17 13.5 0.2 1 23 672 695 672 695 0.95 8 13 2.4e-06 0.00033 22.1 0.5 1 23 701 723 701 723 0.97 9 13 3.2e-05 0.0045 18.5 2.0 1 23 729 751 729 751 0.98 10 13 1.1e-05 0.0015 20.0 1.2 1 23 756 778 756 778 0.97 11 13 0.00018 0.025 16.2 1.1 1 23 784 806 784 806 0.98 12 13 1.1 1.5e+02 4.3 0.9 2 23 814 833 814 833 0.92 13 13 2.4e-05 0.0034 18.9 1.6 1 23 839 862 839 862 0.98
Sequence Information
- Coding Sequence
- ATGGACAACACCCACAAATATAATTACCCTCAAACAAATGAAAACTTCACTGATACAAGTGGATATTCGAGACAGAACTGTTCTCAAGTGCTATCACAGCACCAGTCTCCTGCAAACCAACGCCCTCAACATTTCTTATCTTATACGATGTCTATGCCGATGACTGGTTCGATGTCTCAACCGTTGATGTATACCGCACAGAACCAACAATTATACAATGTCATGTACGGCACTCAGAGTGTGTACTCGAATCAGAACCCTTTCTCTCACTCGTCGACGTTCAACGGTTACACTCAGATGGATAACCTCCCCTGGATTCCGGAATCATCTAATATGAATCAAACGAAAGATAAACCGGATAAGAATACCGAAAAGGGTATTACCGACAAACCGAGCCCTCATAGCTGTTGTGCAGGTCAAATAGATAACATCGGTATCGGATTATGTTCACCTTTAAGTGATTCGTTTAAAATTGTAACCGGTAATGAGTTGAACTATCGAAACCGGAACGTATTAGATACACAATGGTTTTATAGTAGTGGATACAGTACTCAAAAGTACAATGAACTTCCTTCGTGTTCACAAATCAGTTCGAACATCGAACCTGTAACCAATATGCAAAATTCGAACTGTTGCCGTGATAACAGTAcgaaaaatactgaaaatatatcaaagtatTGTAGTATTCAAAGATTGGATGATATtagtactttaaaaaattacccTGCAGAAACCGCGAATCAAAATCAGtacttgaataataaatatatcgatGATAGTTATATCAACGCTTATAACATACATACcgatttaaatactaaaaacgaTACCAAAACGTTCGAGGGTTACCAGATGAGTACGAATCGTTGTGAACTAGAGTCTTGTGACATGCTCAGAACACCTTCGTCGTGTTTACAAGATCCAAGTACTCCTCTATCAGGCAATTGCACACTCCCTTCCTTAAATCACAGTACAGCATATTATGCTCATGAAGAAATGAGCTGTATGGAGTTATATCAACCGGCACTTGGAATTAATTCAAAACCTGAAAGTCAGTGCGGAGGAGAAAGTGACATCATAGTTGAAGAATCCGATGAAGATTCTTCAGAAGTCAGTGAAGATTGTGACATAGACACTGCtactgtgtatgtatgtgcagtGTGTAATATGTCATGTTCTACAGGAGAAATAGCCTTTTTTAATATTGGAAATGAAACCTTACTGACCAGTACGACACAGACTTCAGTCGTATCGAAATTGAACGACGTAACTAAACGTAACTTCCCGCGTACACCCGCCGATCACATCTGTAGTCTTTGTTTGAATCTCGTAAACACTGTCGATTGTCTCGAAGTGAAATTAAACGGAGCCCGTAAACAGCTCTATGACATTTTCGAGAAAACGTGTTCCGTATTGGGAGAGATGATCGTGAAAGAAATAAATCCAGGTCTCGAGAACACTTGTAAGAATATCGCCGAGCCGGAGAATAACGTTATCGATGATCCGATAATTAACGCCGAATCTGTTCTGCCGGAGATAGAGAGTATCGCTGAAGAAAAGACTGACCGTGGAGTTACGGATTCAGTGAACAGTAAACGTATTTGtaaaatctgtaataaatatttctgccAAACCGatgtacataaacataaattgttACACGCTAGccatataaatttcaaatgtacTCTTTGCCACCGTAGCTTTACCATGAAACGTTTGTTAGATAATCATCTGAAAAGGCATAACGGTCAGCGGGATTTCCTTTGCGATAGATGCGGAAAAAACTACATTAAGAGACACAGCCTCGAGTTACATTTAAAAAGACACGAGGGagcttttagatttttctgcgATGAATGTAAAAAAGGGTTCGTGAGCTCTGCAGCTCTCGAAGTACATAAGAGAACTCATTCcgatataaaattgttttcttgtgAGATCTGTAACAAGAAATTCCGTACGAATACCAACTTACAAGAACACGTACGGTTCTGTTCAGGAGATTTACCGTTCGAATGTGATAAATGCGATAAGAAGTTTGCGGCAACAGCGAAATTAAACGATCACGTTAAGGCCGTAcatgaaaaaaactttaaatttaaatgtactgACTGTGGTAAAGGTTTCACAAAAGAATCTGACTTTAAAGCACATGCAATATCGCATACCGATGACAAACCTTTCCAGTGTAATACTTGCGGGAATCGATATAAAACCGTTGGAAATCTAAATCATCATATTAAAATCCATAAGGAGTTACCCTATAAATGTGAACTGTGTTCGAAAGGATTTCGGCGAAAAGAGAATTTCGAGGCACATAAAAACGCACACAGCGGTTTAAAACCGTTCACTTGTACGATTTGCCCGAAAAAATTCGGTGCTCGCCGGCATCTCGACGCTCATTTGAAAATACACAACGGGACGGTGAAGAAACGTACGTGCCCGGTCTGTAGCAAACAGTTAGCTCACGGTCTAACTGAACATATGAGACTGCATACCGGTATTAAACCGTTTAAGTGTAATATATGTTTGTTAACATTTACTAGTAGTGGTGCCTTAAGGAAACATACAAAAAGGAATcataaaagtcaataa
- Protein Sequence
- MDNTHKYNYPQTNENFTDTSGYSRQNCSQVLSQHQSPANQRPQHFLSYTMSMPMTGSMSQPLMYTAQNQQLYNVMYGTQSVYSNQNPFSHSSTFNGYTQMDNLPWIPESSNMNQTKDKPDKNTEKGITDKPSPHSCCAGQIDNIGIGLCSPLSDSFKIVTGNELNYRNRNVLDTQWFYSSGYSTQKYNELPSCSQISSNIEPVTNMQNSNCCRDNSTKNTENISKYCSIQRLDDISTLKNYPAETANQNQYLNNKYIDDSYINAYNIHTDLNTKNDTKTFEGYQMSTNRCELESCDMLRTPSSCLQDPSTPLSGNCTLPSLNHSTAYYAHEEMSCMELYQPALGINSKPESQCGGESDIIVEESDEDSSEVSEDCDIDTATVYVCAVCNMSCSTGEIAFFNIGNETLLTSTTQTSVVSKLNDVTKRNFPRTPADHICSLCLNLVNTVDCLEVKLNGARKQLYDIFEKTCSVLGEMIVKEINPGLENTCKNIAEPENNVIDDPIINAESVLPEIESIAEEKTDRGVTDSVNSKRICKICNKYFCQTDVHKHKLLHASHINFKCTLCHRSFTMKRLLDNHLKRHNGQRDFLCDRCGKNYIKRHSLELHLKRHEGAFRFFCDECKKGFVSSAALEVHKRTHSDIKLFSCEICNKKFRTNTNLQEHVRFCSGDLPFECDKCDKKFAATAKLNDHVKAVHEKNFKFKCTDCGKGFTKESDFKAHAISHTDDKPFQCNTCGNRYKTVGNLNHHIKIHKELPYKCELCSKGFRRKENFEAHKNAHSGLKPFTCTICPKKFGARRHLDAHLKIHNGTVKKRTCPVCSKQLAHGLTEHMRLHTGIKPFKCNICLLTFTSSGALRKHTKRNHKSQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01050589;
- 90% Identity
- iTF_01050589;
- 80% Identity
- -