Aori015194.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Acanthacorydalis orientalis
Gene Symbol
-
Assembly
GCA_034766995.1
Location
CM068316.1:53414389-53417524[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.0051 0.72 11.6 8.6 1 23 6 28 6 28 0.97
2 16 0.042 6 8.7 2.4 1 23 62 84 62 84 0.95
3 16 0.0012 0.17 13.6 0.4 1 23 89 112 89 112 0.94
4 16 0.035 4.9 9.0 0.6 2 23 116 138 115 138 0.96
5 16 0.00069 0.097 14.3 0.2 2 20 147 165 147 167 0.88
6 16 0.019 2.6 9.8 0.6 1 23 175 197 175 197 0.98
7 16 0.00052 0.073 14.7 0.5 1 23 203 225 203 225 0.97
8 16 0.0021 0.29 12.8 3.7 1 23 231 253 231 253 0.93
9 16 0.00066 0.092 14.4 2.3 1 23 259 281 259 281 0.99
10 16 0.0004 0.057 15.1 0.0 3 23 581 601 579 601 0.96
11 16 0.00052 0.074 14.7 1.1 3 23 643 664 643 664 0.97
12 16 1.8e-05 0.0026 19.3 0.1 1 20 674 693 674 695 0.93
13 16 6.1e-05 0.0085 17.7 1.1 1 23 704 726 704 726 0.99
14 16 0.00018 0.026 16.1 0.5 2 23 733 754 732 754 0.97
15 16 0.00012 0.017 16.7 1.4 1 23 760 782 760 782 0.96
16 16 0.01 1.4 10.7 3.8 1 23 788 810 788 810 0.98

Sequence Information

Coding Sequence
ATGAAGCTTAAGCTGTTCTGCTGTAAGCAGTGCAACAAGACTTTCAAAAACGAACATTCTTTTTTGAAACATGGACAGCGTCACACGAAATCCAGGAATGATGAAAACGATCTGAAAACCGAAAAAAGTCCGACAGAGACCGCCGGAGATACCGTCAGACCGAAGGGCAAACACGGGAAGAAGTACGAGTGTAAAACATGTAGCAAGCAGTTTTGGTTCCAGAACAGTTTGAAAAAGCACGAGGGTCGGCATCAGAACAACGGCTTCGTGTGTCGTAACTGTGGCGAATCTTTCAGTTCGGCGCGCCTGAGGGAGAAGCATCGTGAGAACGTTCACAAGCAGTTGCAATGTTTTATTTGCCGTATCCGGTTCGATTcgaagattaaatttttaaaccacGTGGAGACGTTACACGAAGGAAGGAATCGGGATTTAGCTGTCTGCAACGTATGCGGAAAACAGTTCAAAAGTAAATCTCAGCTGTCACCCCATCTCGCTTCGAAATGCGGGACCGTCAAAAGATTCAAGTGCGATATATGCGGGACACTGCTGATGACGACCGGTGCGCTCCACAATCATCTGTTGAGGCACACGGGAAACCGATCTCACATGTGCAGGTTCTGTGCGAAGACCTTTGTTTCTGCCGGACAGCTCATAGTCCACGAACGTGTTCACACTCAGGAGAAAGCGTTCGTCTGTGAGGTTTGCAACAAAGGATTCTGCCACAGGCAGAGTTTAATCACTCACAGCACGCTGCACACCGGGATCAAACCGTTCCAGTGCGAAGGATGCAGCAAAGCGTTCTCCTGTATCGGCAATTTACTCAAACACCGTAAAACTCATGCAGACACTTGCGGTGTTCTACCGCTGACCACGCACAGGGTCAAGAACCCGGAGACGCGCGCGAAAGTTCAGGCGAACACGCCGAACGGAATTAAGCTTCGacagaataaaaagaaattggTTATACTCGACAGAAGCGAAGAAATCAAACGTGAAAACGAAGTTTGCAGTGAAAGTAACAATTCAGATAGCGTTTCTGTGACTGAGAGTTCGACCGGTGAGCAGATTCGAAAAAGACCTTGCGAGTTCATCGAGGCAGTTAGTTTAAAAGTAAACGTTAAACAAGAGAACGTTTCTGTAAAACATGAACGAAAAATCGACGACGATATCGATCTAAAAGACGGAATGAATACGTCAAACGTTCCGTCGGTTAAACAAGAGTTAAGTAGAAGTACGAACGGGTCGAATTCGGTCGAAAGTAACGAAACGGTACTGATCGAgataaacgatataaaaaaagaaagatcGGACTCGGAAAATGTTCCCGCATCGAACAAACAGTTTAACAGTATTAAAACGTACAAATCTAACGATGATACAGAGAAAGAAAACAGAATAGGATCAGAGAATAATTTTTCATCGACATGTCAGAAAGAAAGTGTAGTCATACATagagaaatttttataaagtcgGAAAGTAACAGAGAATCTAACAGTAGGATATCCGATGATGATGAGACAGACCACATAAACGATTACGTCGAAAGTCATTACGACGATAACTTTTCAGAAggtaatgattttaaattgaccGAATCGAATTCTGAAAATAAGAAGCCGAGACAAAAGTCTACCAGAGGTAGAACTAGAAAGAAGTTAAAGGAAAATGTATCGAAAACAATCGACGAAGTATCATTTAGAAACGAGCGTAAAACAGGTAAAGGCGATGACATGGCATGCAAAGTATGCGGTCTCGTTTTTAACCGTGTTGCCTGGTTAATACGACACGAAGCCACGCACGAGAAAGGATCTTTGGAATTAAACGAACTGAAATGTTTTAAGTGTAATTGTTGCCGTGAAATCTTTCAGACTCGCAAAGAGTGCATGAGCCATCAGGAGAAATACCATAAAAACGAACTCGGCTGCGAGATATGTAACAAAATCTTCTCGAATCGAGATAGCCGACGGACACATATCAATTATTACCATAAAGGGATTCCTCGGAGAGCTTACGTATACATCTGTGACAAGTGCGGTAAAACTTTCAAACAGAAGAACGCTCTGAGCGCGCATGAAATCAGTAATTGCGGGATATCCGGGAAAGTATTCAAGTGTGAAGTGTGCGAGAAACAGTTCAGTAATATTTACAGCCGACGTGCACACATGAAAATACACGAAGGAGAAAAAGGTCAAGTGTGTAAATTTTGCGGGAAGAGTTTCGTGTGGAAGGGGCAGCTGAAAGTCCACGAGAGGAGTCACACCGGCGAAAAACCGTACAAATGTCAGTTCTGTCCGAAAGCGTTCGCGCACAGGGAGAGCCTCATCACGCACAACAGCATACATACCGGGTTTAAACCGCACGTCTGTGAAGGCTGCGGGTCACGTTTTTCCTGCATAGGCAATTTGTTCAAGCACCGTCGTACTCATTCGTCGGTTTGTAATACGAGTGCGTCTAAGGAAGACAAGGTGAAGAAGAAACAAAAAGCACAAGTAAACATGCAGGGAGTTAAGTTAAAAAGTAGTTCCCGGCAGGAGAACGCAAcagatgaagaaaataaaagtaatgtacCAGtcagttaa
Protein Sequence
MKLKLFCCKQCNKTFKNEHSFLKHGQRHTKSRNDENDLKTEKSPTETAGDTVRPKGKHGKKYECKTCSKQFWFQNSLKKHEGRHQNNGFVCRNCGESFSSARLREKHRENVHKQLQCFICRIRFDSKIKFLNHVETLHEGRNRDLAVCNVCGKQFKSKSQLSPHLASKCGTVKRFKCDICGTLLMTTGALHNHLLRHTGNRSHMCRFCAKTFVSAGQLIVHERVHTQEKAFVCEVCNKGFCHRQSLITHSTLHTGIKPFQCEGCSKAFSCIGNLLKHRKTHADTCGVLPLTTHRVKNPETRAKVQANTPNGIKLRQNKKKLVILDRSEEIKRENEVCSESNNSDSVSVTESSTGEQIRKRPCEFIEAVSLKVNVKQENVSVKHERKIDDDIDLKDGMNTSNVPSVKQELSRSTNGSNSVESNETVLIEINDIKKERSDSENVPASNKQFNSIKTYKSNDDTEKENRIGSENNFSSTCQKESVVIHREIFIKSESNRESNSRISDDDETDHINDYVESHYDDNFSEGNDFKLTESNSENKKPRQKSTRGRTRKKLKENVSKTIDEVSFRNERKTGKGDDMACKVCGLVFNRVAWLIRHEATHEKGSLELNELKCFKCNCCREIFQTRKECMSHQEKYHKNELGCEICNKIFSNRDSRRTHINYYHKGIPRRAYVYICDKCGKTFKQKNALSAHEISNCGISGKVFKCEVCEKQFSNIYSRRAHMKIHEGEKGQVCKFCGKSFVWKGQLKVHERSHTGEKPYKCQFCPKAFAHRESLITHNSIHTGFKPHVCEGCGSRFSCIGNLFKHRRTHSSVCNTSASKEDKVKKKQKAQVNMQGVKLKSSSRQENATDEENKSNVPVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-