Aori010338.1
Basic Information
- Insect
- Acanthacorydalis orientalis
- Gene Symbol
- -
- Assembly
- GCA_034766995.1
- Location
- CM068315.1:27864782-27875905[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.00031 0.044 15.4 0.1 2 23 298 319 297 319 0.97 2 18 2.8e-05 0.004 18.7 2.2 1 23 327 349 327 349 0.99 3 18 0.00011 0.015 16.8 1.8 1 23 355 377 355 378 0.96 4 18 0.0001 0.014 16.9 0.6 2 23 384 405 383 405 0.97 5 18 0.00023 0.032 15.9 4.4 1 23 411 433 411 433 0.96 6 18 0.00073 0.1 14.3 2.6 1 20 439 458 439 459 0.95 7 18 1.2 1.7e+02 4.1 0.2 2 12 472 482 472 490 0.85 8 18 0.00014 0.02 16.5 1.8 1 23 496 519 496 519 0.97 9 18 0.002 0.29 12.8 2.0 1 23 531 553 531 553 0.96 10 18 0.00018 0.025 16.2 1.3 1 23 559 581 559 581 0.97 11 18 0.00063 0.088 14.5 1.2 1 23 587 609 587 609 0.99 12 18 0.00027 0.038 15.6 0.6 2 23 788 809 787 809 0.96 13 18 7.4e-07 0.0001 23.7 1.2 1 23 817 839 817 839 0.99 14 18 2.2e-05 0.003 19.1 0.1 1 23 845 868 845 868 0.96 15 18 0.0012 0.17 13.5 2.1 2 23 874 895 873 895 0.97 16 18 4.8 6.8e+02 2.2 0.3 3 23 925 943 924 943 0.71 17 18 0.0092 1.3 10.8 1.5 1 22 949 970 949 974 0.90 18 18 5.4e-08 7.7e-06 27.2 0.8 1 23 984 1006 984 1006 0.98
Sequence Information
- Coding Sequence
- ATGACAGATATTCTGGATATGGCGAATATGACGGATATTGTTGATAAGGTGTTTATTGCCGATATGTTGGACATTGCGGATACTGCAGATGTGGCGATTATTGAGGAGGCTTCGGATTTGTATGCTTTTTTGCAAATTGTACATTCGAACGGTCGTTCATCTGAATGCATTGTAGCATGTCTCGACAGAGCGGCACGTGAAGCACATTTCTTACCACATACCGCACAGAGTACTTCTGGCCGACTTGCATATGATTTTGGACAAGACTCACATGTGAACGGTCGTTCTGTTGTGTGTTTTTGTCGTACGTGCGATTTAAGATCGACAACTGATTTCCCACATATGataAGTCAAAACGATGGGCttccatatttaatttgtaGCGATTGTACTGCTCAATTACATCGAGTGTATGATTTTAAAGCACAGTGTGAATATTCCGATTTAATATTACGGCAATTATTAAACTCAAAAAAACAAACTGAATTCATAGAATATGTACCGGATTCAATTAAAGAGCAAATCGATGAGTATTCAGATCAAGGCAGTTTTGTTAAATACGATGATATAGGTAAAACAGAAATAGATTCTAATGTACTgcttaatgatattaaaaattatgaagtgTGTCAAAATATACAAGACAACTGTATTATTGAGGATAATCAAATAGCttcaaatattacaaatcaTGAAATTGATGATGAACTGGAAGAAAACAAAGATGATTCATCATCAGAAGATGAAATGTCAATAATGGAAGCATTCCAACTAAAAAAGAATCAGTCTGTGTTTTATTccgaaatgaaaaatgaaaaagaaccTACAAATAGgctacgaattaaaaaaattatgtcaaTGGGTCCTGATAAATGTGATCCTACAAATTTAACTTGTAGAATCTGTAATAAAgttcttgtaaatatttattctttagcTCGACATATGGAAATGCATGATGAAGatcgaaaatttaattttacgtGTTCAGTGTGTTTTAAAGGATTTTATGAAAAGGGGCAACTAACAAAACATTTGAGACGGCACAAAGGAGAAACAAGATATAAATGTGAACAATGTTCGAAAGGCTATTATGAACTCAGTGCTCTTTCTGTACATATGAAAACGCACCATAAAGCAGTTCCAATTTCATGTGAAGTTTGCAAAAAAAGCTTCTATGTTCAGAAACAAttagatattcatttaaaaacacattctaCTAAAAAAGAACATAACTGTAATAAATGTGGTAAGACTTTCAATTTACCATGTCAGTTAAAAAGACATGAGTTAGTTCATAAGAAAGAATCTTCTTACCCTTGCTTATTTTGTGATAAGATATTtaagtattcatttaatttaaagaagCACCACGAGTGTTTTCATGTTGATGGAAATGAAATCAAGCTTGAAGTTTGTAATGTTTGTggaaaatcagtaaaaaatataaaaccacaTATGTTAACTCATGCGACTAATGCGACATTTGAATGTTCTCAGTGCCCACGTGCTTTTAAAGATCAGTATCGATTGAATTATCatcgaaaaataaaacacagtGTCGATAATGGGGGTCGGCAACCTTTTCCTTATTTATGTGCTACATGTGGTAAGCGTTGTGCATCGACCACTAAGCTAAGAGTACATACACGCGTTCATACGGGAGAACGGCCGTTTGCTTGTAATTTATGCGATAAACGGTTTATAACCAATGCTCAACGATGTGCTCACGTTCGTATTCATACAGGAGAAAGACCTTACGTGTGTGGAGTTTGTACTCGTGGTTTTCATATAAGAAATCTATTAACCCGTCATATGCTTACACATACAGGTGAAAAGCCTCATAAATGTGATatGTATGAAAATGATGGCCTTCCTGACTTAATTTGTTCTGAGTGTTTATCAGAAATGATccgttttaatagttttaaagaaCTTTGTGTACGTTCCAATACTTTGTTTCACAATGCGTTGAAAGTAGACGAAGAAATAAAAGTAGACATTGATGAAGAATTTATTAGTAAAGAGACCCAAGCTTTGAAGTTCttgaaagtaaaacaaattCCAACATTGAATGGTGATGCCACAGACAATTTTGAAAGTAAGTTTATAGAAGAAGGtaaagaatcaaaattaaatagttttgaaatagataaaataaaaactactaaGGAATTAGATACATTTGAAACAGATGATCATTATGAGAGTGATGTGAAAGATGAGTGGCCATCAGAAGATGATGTTCCAATTGAAGTATTGAATCTTtctgaatcaaaaattaaaagggAAACCGCAAATAAGTTGCGGGTAAAGAAAGTTATGATGATGGGTCTAGATAAGTGTGATCCGACTACTTGTACTTGTAAGATTTGCAATAAGGTACttgtgaatataaattcattagcGAGACATATGGAAGTGCACGATGAGAACCGTCAGTTTAGTTTTACATGCAATGTCTGTGATAAAGGATTTTATGAAAAAGGCCAGTTAACAAAACATATTAGGCGACATAAAGGAGAAACTAGATATGAGTGTGAAAAATGTGGAAAAGGCTTTTATGAGTTGAGTGCTTTAGCTGTTCATATGAAAGCATTCCATAAATCTGAACCTTTATCTTGTAATCagtgtaaaaaaaagttttatgttaGATTACAGTTAGAAATTCATCGAAAGACTCATTCGACTGAAAAAGAACACTATCCTGTTAGTCTTAAAAAACATCATACAACATTCCACATTGGTGGCAATGAACAAAAAGCTGAAATTTGCCAAGTTTGTGGGAAGGctgtaaagtttttaaatagtcACATGACTCGAATTCATAGTGAAGAAAGACCTCATAAATGCACAGAATGCCCTGCTGCATATGTTTATAAATCACAGCTCGATGAGCATCGCCAGATACTTAAGCATCATGTTCGTACACATACCGGTGAACGACCTCATGAATGTGATATTTGTGGCCGTGCTTTTACACAAAACTCTGCTCTAAAGACTCACATGAAAATTCATTAA
- Protein Sequence
- MTDILDMANMTDIVDKVFIADMLDIADTADVAIIEEASDLYAFLQIVHSNGRSSECIVACLDRAAREAHFLPHTAQSTSGRLAYDFGQDSHVNGRSVVCFCRTCDLRSTTDFPHMISQNDGLPYLICSDCTAQLHRVYDFKAQCEYSDLILRQLLNSKKQTEFIEYVPDSIKEQIDEYSDQGSFVKYDDIGKTEIDSNVLLNDIKNYEVCQNIQDNCIIEDNQIASNITNHEIDDELEENKDDSSSEDEMSIMEAFQLKKNQSVFYSEMKNEKEPTNRLRIKKIMSMGPDKCDPTNLTCRICNKVLVNIYSLARHMEMHDEDRKFNFTCSVCFKGFYEKGQLTKHLRRHKGETRYKCEQCSKGYYELSALSVHMKTHHKAVPISCEVCKKSFYVQKQLDIHLKTHSTKKEHNCNKCGKTFNLPCQLKRHELVHKKESSYPCLFCDKIFKYSFNLKKHHECFHVDGNEIKLEVCNVCGKSVKNIKPHMLTHATNATFECSQCPRAFKDQYRLNYHRKIKHSVDNGGRQPFPYLCATCGKRCASTTKLRVHTRVHTGERPFACNLCDKRFITNAQRCAHVRIHTGERPYVCGVCTRGFHIRNLLTRHMLTHTGEKPHKCDMYENDGLPDLICSECLSEMIRFNSFKELCVRSNTLFHNALKVDEEIKVDIDEEFISKETQALKFLKVKQIPTLNGDATDNFESKFIEEGKESKLNSFEIDKIKTTKELDTFETDDHYESDVKDEWPSEDDVPIEVLNLSESKIKRETANKLRVKKVMMMGLDKCDPTTCTCKICNKVLVNINSLARHMEVHDENRQFSFTCNVCDKGFYEKGQLTKHIRRHKGETRYECEKCGKGFYELSALAVHMKAFHKSEPLSCNQCKKKFYVRLQLEIHRKTHSTEKEHYPVSLKKHHTTFHIGGNEQKAEICQVCGKAVKFLNSHMTRIHSEERPHKCTECPAAYVYKSQLDEHRQILKHHVRTHTGERPHECDICGRAFTQNSALKTHMKIH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -