Aori023442.1
Basic Information
- Insect
- Acanthacorydalis orientalis
- Gene Symbol
- Rufy2
- Assembly
- GCA_034766995.1
- Location
- CM068319.1:14768313-14777839[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 1.7e-07 2.4e-05 25.7 4.1 1 23 844 866 844 866 0.98 2 12 2e-06 0.00029 22.3 1.3 1 23 872 894 872 894 0.97 3 12 3.7e-07 5.2e-05 24.6 0.4 3 23 918 938 916 938 0.97 4 12 1.7e-06 0.00024 22.6 0.9 2 23 949 970 948 970 0.96 5 12 0.00013 0.018 16.7 0.1 1 23 976 998 976 998 0.96 6 12 2.3e-06 0.00033 22.1 1.2 1 23 1004 1026 1004 1026 0.98 7 12 7e-05 0.0098 17.5 0.7 1 23 1032 1054 1032 1054 0.94 8 12 0.00031 0.043 15.4 0.3 3 23 1062 1082 1060 1082 0.96 9 12 7e-07 9.8e-05 23.8 1.0 1 23 1088 1110 1088 1110 0.98 10 12 0.0011 0.16 13.7 0.3 1 23 1116 1138 1116 1138 0.99 11 12 5e-06 0.0007 21.1 1.0 1 23 1144 1166 1144 1166 0.98 12 12 1.2e-05 0.0017 19.9 0.3 1 23 1172 1194 1172 1194 0.98
Sequence Information
- Coding Sequence
- ATGAAAGCAATCGAGTCTTATGAACCACCTCTGGTGGCGATGGAACAAGAAATGGCAGGAGCCCAAGATACTATTTATCTTTGTAATTTCCGTGTATCAGTAGATGGTGAATGGCTGTGTTTGAAGGAGCTTCAAGATGTTGAATTTAACTTACAAGATTCATTCATTCAATCTGTATCTACTCCTTCTCCTGACAGTCATTGTAACATACTTGccCGAGACCCGGTCGTCATCGAACGGAGCAATTTAGTTAATATCAGCAAACTAGTCGTAAAAGAATTAATCGAACAATCTTTACGTTATGGTCGAATGTTAGATTCAGACCATATGCCCttacaacattttttcattgtacTCGAACATGTATTACGACATGGTCTTAGACCTAAAAAAGGTTTGCTTGGTCCCAAAAAAGAACTATGGGATATATTACAGATGGTCGAAAAGTATTCATCAGAAGCACAAGATATAACTGCTAGCGTTAGAGATTTACCTACTGTACgaaCACATATGGGAAGAGCAAGGGCTTGGCTACGATTAGCTctaatgcaaaaaaaattagcAGACTACTTAAAAGTTTTAGTAGATCACAAAGAAGAAGCCCTCGTCGAATATTTTGAACCAGATGCTTTGATGTTAAGTGATGAAGCAATAGTTATTATTGGTCTTCTTGTTGGGCTCAATGTTATTGATTGTAATCTTTGTATTAAgGGTGAAGATTTAGATTGTCAACAGGgtgttattgatttttcattatatttacgtTCTTCAACACAAATAGCAGATGAAACAACAGATGATACAACTGGTGAAAACATGACCACTGTTCTTGATCAAAAGAACTATATTGAAGAACTGAATAGACACTTAAAtgcaACTGTAACAAACCTCCAAGCAAAAGTTGAATCACTTACCACTACGAATGCTTTGATGAAAGAAGATTTAGCTATCAGTAAAAACAATCTTCTAAGTTTATATGAAGAAAATCGACAACTTAAACAAGAGCTGGGAAAGGATATATCTTCTGAACGTATGGATGAAGGAGGTGgaggaaatgaaataaaatcccAATTGAATAATGCTGATATTGAAGTGCTTCGTGCTCAGCTAGAAGATGAACGAAAAGCAAGACTGGAAGCAGAGAAGGAGCTTGATTTACAGATGTGTCTTAAAGCTGAAATGGAAGTGGCGATGAAACTATTAGAGAAAGACATTCATGAAAAACAGGATACAATTATCTCCTTACGGCGACAATTAGATGACATCAAACTTATAAACTTAGAGATGTATAAAAAGTTACAGGAATGTGAAAGTTCACTTAAACATAAAACGGAGCTTAGTGCAAAACTCGAGGCAAAGACTGTATCGATGAATGAAACAATCCAGAAGCTCGATGAAAAGTATCGTGAGTGTGAAGAAGCACGAATATTAATTGAACAATCTTCTCGAGAATTAGGACGGCGAGCTGCAGAACAAGAGGAAGTTGCAACTAATGTCGAAGGGGACTTACGTAATGAACGAGAATGGAGATTATCTCTCGAAAAGGCAGTTCAAACAGATCGAGAACGTATAGCacaattacaaaaagaattGGCTCAATTGCGCGCAGTTGccagtaaatacagTGCCCTTCAAGAAGACTACTATACATTAAAAGAACATTGTTTGGAACAAGAACAAACATTAGAAGAACTAGGTACACAATTAAGTGTAAGTAAATTAGAAGTAGCTGACCTTCGAGAAGAGGTAACTCGTAATAAACCTGAAGGTACATGGGCATTAGATAAAAATGCAAGTCATTGTAAGACTTGTACAAAAGAATTCAATATAACAAGAAGAAAGcATCATTGTAGAAATTGtggagaaatattttgtaattcgtGCTCAGACAATACTATGCCATTGGCATCTTCTGCAAAACCGGTACGTGTTTGTGATGAATGTCATATTACTTTAGTTAGTCGGCAATCGACATTTGAAATGGGAGAATtaacattagaaaatatatgtcGTGTTTGTATGGCAGAAAATTTAGAAATGCGTTCTATATTTGCTGCAGATGAAGCAGCAGacacaaacatacatttatCAGAAATGATAATGACGTATGCTTCTGTACAGATAACATTAGGTGATGGTTTACCGGaacaaatatgtttacaatGTGCCAGTCAAGTAAGCAAAACTTATACTTTTAAACGACAATGTGAAAAATCAGATGCGATTTTACGTGAGAAATTAGGGTTAGAAAAACTCGTATTACCTAAAGAGGAAGAAGAGATTGTTGTACATATACAACAAACTGACGATTTCGACCCAGAAGAAATAGTTATAAAGCCAGAAATAGAGGAACTCGAAGAAGAGGAGGAACAGCTTCATTCACCAGACCATTATGAACCAGATCTAGAGTTATTAGCTGAAGTTGAGGAACTTGCAAAACAGCTTGACTTTAAACATAATGAAAGTATTGttaataatgatgatgatgaaggTGATGATCCGACATACGGTAAACAAAAACCGAAGAGACATAAATGCCCTGTGTGTAAGAAAGTGTTTAATCGAGCTAGTCACTTGAGTCGGCATATGAAAATTCATAACGCGCAGAAGCCGTTTTCTTGCCCGATTTGTAAAAAGAGGTTCGTTCGAAACGATCATCTGTTACGACATGAAATTGTACATACGGCGAATCTAGATAtgaaaaaagacatttttgatGAAGAAAGTGGTGAGAATACCACTGTTTTGGCATGTACTATTTGTGACAAAACGTTTACTAAAAAAGAGAGTCTTGCATCGCATATGCGAGTTCATGCAGGTGGTACGAGATCTTCACATGCGCTTTCTTgtgaaatttgtacaaaaaaattctcgAAACCGAGTCAGTTAACACGACATGTTAAAATTCATGCTTCTATCAAGCCTCACGTCTGTGGGTTATGCGATAAAGGATTTGCACGGGGAGAACAATTGATCAATCACATGAACGCTCATAGTGGAGTTAAACCGCATGTGTGCGGTGTTTGTTCCAAAGGATTCAATCAAATCAGTAATTTGAAGGATCATATGCGTACACATAATGGAGAAAAACCATTTCTCTGTTCCACTTGCGGCAAAGGTTTCAATCAACTGGGTAATTTACGTCAGCATACTGTACGTCATAGTGGAATAAAAGCACATCTATGTAATATTTGTGGAAATGGTTTTGCTAGTAAAGGTGAACTCGGCGCTCATCTACGAAAGCATACCGGTGCACGACCATACGTTTGTGACATTTGTAGTCGAGGTTTTACTACTTCGAGTTCATTGACCAAACATAAGCGAATTCACAGTGGAGAAAAACCGTACGAATGTGATGTATGTGCGATGCGATTTTCTCGTAGTGGTATTCTTGCTCGTCATAAACGTACTCATACGGGTGAAAAACCTTACGTTTGCAAGTTTTGTTCGAAGGCATTTTCGCAGAGTAATGATTTGAGCTCTCATTTACGTATTCACACTGGAGAAAAACCCTATGTTTGTGATGCATGTGGTCAAGCATTTCGACAAAGTTCTGCTCTTAAGACACATAAGAAAGTTCACATAGATAGAACAGCACTCGCTGATAATAGATCCGCTGCACTAGCACTTGCTCGTGCAGCTGCGTTACTTAACGGTACTGCACAGTGA
- Protein Sequence
- MKAIESYEPPLVAMEQEMAGAQDTIYLCNFRVSVDGEWLCLKELQDVEFNLQDSFIQSVSTPSPDSHCNILARDPVVIERSNLVNISKLVVKELIEQSLRYGRMLDSDHMPLQHFFIVLEHVLRHGLRPKKGLLGPKKELWDILQMVEKYSSEAQDITASVRDLPTVRTHMGRARAWLRLALMQKKLADYLKVLVDHKEEALVEYFEPDALMLSDEAIVIIGLLVGLNVIDCNLCIKGEDLDCQQGVIDFSLYLRSSTQIADETTDDTTGENMTTVLDQKNYIEELNRHLNATVTNLQAKVESLTTTNALMKEDLAISKNNLLSLYEENRQLKQELGKDISSERMDEGGGGNEIKSQLNNADIEVLRAQLEDERKARLEAEKELDLQMCLKAEMEVAMKLLEKDIHEKQDTIISLRRQLDDIKLINLEMYKKLQECESSLKHKTELSAKLEAKTVSMNETIQKLDEKYRECEEARILIEQSSRELGRRAAEQEEVATNVEGDLRNEREWRLSLEKAVQTDRERIAQLQKELAQLRAVASKYSALQEDYYTLKEHCLEQEQTLEELGTQLSVSKLEVADLREEVTRNKPEGTWALDKNASHCKTCTKEFNITRRKHHCRNCGEIFCNSCSDNTMPLASSAKPVRVCDECHITLVSRQSTFEMGELTLENICRVCMAENLEMRSIFAADEAADTNIHLSEMIMTYASVQITLGDGLPEQICLQCASQVSKTYTFKRQCEKSDAILREKLGLEKLVLPKEEEEIVVHIQQTDDFDPEEIVIKPEIEELEEEEEQLHSPDHYEPDLELLAEVEELAKQLDFKHNESIVNNDDDEGDDPTYGKQKPKRHKCPVCKKVFNRASHLSRHMKIHNAQKPFSCPICKKRFVRNDHLLRHEIVHTANLDMKKDIFDEESGENTTVLACTICDKTFTKKESLASHMRVHAGGTRSSHALSCEICTKKFSKPSQLTRHVKIHASIKPHVCGLCDKGFARGEQLINHMNAHSGVKPHVCGVCSKGFNQISNLKDHMRTHNGEKPFLCSTCGKGFNQLGNLRQHTVRHSGIKAHLCNICGNGFASKGELGAHLRKHTGARPYVCDICSRGFTTSSSLTKHKRIHSGEKPYECDVCAMRFSRSGILARHKRTHTGEKPYVCKFCSKAFSQSNDLSSHLRIHTGEKPYVCDACGQAFRQSSALKTHKKVHIDRTALADNRSAALALARAAALLNGTAQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -