Basic Information

Insect: Acanthacorydalis orientalis
Gene Symbol: -
Assembly: GCA_034766995.1
Location: CM068316.1:7430375-7437294[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0018 0.26 13.0 0.9 1 23 187 208 187 208 0.98

2 13 1.9e-06 0.00026 22.4 7.5 1 23 214 236 214 236 0.99

3 13 0.0001 0.014 17.0 0.2 1 23 242 264 242 264 0.96

4 13 0.017 2.4 9.9 4.1 1 23 270 292 270 292 0.99

5 13 1.1e-05 0.0015 20.0 9.5 1 23 298 320 298 320 0.97

6 13 5.3e-05 0.0075 17.8 2.0 1 23 326 348 326 348 0.96

7 13 3.7e-06 0.00052 21.5 1.9 1 23 354 376 354 376 0.99

8 13 3.8e-05 0.0054 18.3 0.3 1 23 382 404 382 404 0.98

9 13 1.9e-06 0.00027 22.4 1.3 1 23 503 525 503 525 0.98

10 13 4.3e-08 6.1e-06 27.6 0.4 1 23 531 553 531 553 0.99

11 13 6.2e-07 8.7e-05 23.9 0.5 1 23 559 581 559 581 0.99

12 13 3.2e-07 4.6e-05 24.8 0.8 1 23 587 609 587 609 0.98

13 13 1.6e-05 0.0023 19.4 0.9 1 23 615 638 615 638 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0018	0.26	13.0	0.9	1	23	187	208	187	208	0.98
2	13	1.9e-06	0.00026	22.4	7.5	1	23	214	236	214	236	0.99
3	13	0.0001	0.014	17.0	0.2	1	23	242	264	242	264	0.96
4	13	0.017	2.4	9.9	4.1	1	23	270	292	270	292	0.99
5	13	1.1e-05	0.0015	20.0	9.5	1	23	298	320	298	320	0.97
6	13	5.3e-05	0.0075	17.8	2.0	1	23	326	348	326	348	0.96
7	13	3.7e-06	0.00052	21.5	1.9	1	23	354	376	354	376	0.99
8	13	3.8e-05	0.0054	18.3	0.3	1	23	382	404	382	404	0.98
9	13	1.9e-06	0.00027	22.4	1.3	1	23	503	525	503	525	0.98
10	13	4.3e-08	6.1e-06	27.6	0.4	1	23	531	553	531	553	0.99
11	13	6.2e-07	8.7e-05	23.9	0.5	1	23	559	581	559	581	0.99
12	13	3.2e-07	4.6e-05	24.8	0.8	1	23	587	609	587	609	0.98
13	13	1.6e-05	0.0023	19.4	0.9	1	23	615	638	615	638	0.95

Sequence Information

Coding Sequence: ATGGGTGAACGAAACGGAAGTTTCGATAAAGAAGCAGTCAATTTAAAAAGTGATACCGACAACGGTGATATAAACGGTGATAATTTGTGCATTCCAAAGCAAGAAAACGACCAAATAGACGACGCAGTCAAAGTGGAAAACGTTACGGAACGTAAACGGAGTAAACGTAAGAGAAGCCACACGAACAGGTATATACGTATTCCTGCTCTTGATCCGATCATATACAATAAAGACAATGGCGTACAACAAGTTCGCGGTGATGTATTTATTAAGGAAGAGAATATTAGTGATAACGACGAATACATTCCAATGCACATGAATGTCGAATTAGAGACTACAACTGAGTTAAATAAAGAGACTAAATTTGAAAACGATGATCAAGATGATGAGTACATGGAAATGCCTGTAAAGGTTGAAATGTGTAGCAGTGATACAGAACAACCACTGTGTAGCGACGATGAAGACTATTCACCGATAAATTACTGTATCACTGACATGAAAGAAATGGATGGAACAAATGGAGAAATAATCCGTACAAGTTTGGCAGAAAAGGGATTATTCCAGTGTGAGTTCTGTGAGAAGTTTCTGACTGCGGGAGATTTAACTAAGCACAGACGGGTACATACTGGTGAAAGACCTTATCGATGTGAACATTGTGGTATGAGATTCAAACAGAGCAGTCATTTATCAAAACATAGAAAAACTCATACAGGAGAAAGACCATATAAGTGTTCAAGCTGTGACAAATCATTTACTGAAGCGAGTGTTTTAAAAATCCACGAAGCTATCCATTCAGGACTCGGCCCTTATCGTTGTGATCTGTGCTCGGCGAGTTGTCAGTCGACACACGATTTAATTAAGCACAAAAGAGTACACACAAATGAAAGACCCTACAGATGCCATGTATGCGGGAAGTGTTTCAAACAGTGCGGGCATCTTAAAACACATATGGCTTTACATTCAGACGAGAGACCTTTTCAGTGTGACATGTGTACAAAATCATTCATCTTAAGCAGTCATCTTAAAGTTCATAAAGCGTTACATACGGGGTTACGTCCATATAAGTGTGACCAGTGTGATAAATCATATCCATCGAATGGTAAACTGACACAACACAAGAAGACACACAGCGATGATCGGCCATACAAATGTGGATTTTGTTCTAAAGCGTACATAAACAGTAGCGATCTCAAAGTGCATGCTTTATCTCATTCCGGTGTCAGACCGTTtgCTCACCAAGCCTATTTCAAACTGGAAACaataatgaattcaaaaaatgaCTCAATGAAGAATATTAAACAAGAATCAAATAACTTAACTGAAGATAATATATTGGCAACTACATCGAGACCTATGGATCTTGAAAAAGATTTAACACATACAGATGATATTGGACATAATGCTGACAACCTTTTATCATACTGTGAAGTTAATATCGAAGAAAATCCCGAACAGAGACTTGTATTTCCATCGGTCGACGACGTGACCGATACAGAAAAGTTACCCTTCGTCTGTGACATTTGCCATAAAGCATTCCCGCGTCGAAGTTATTTATTTGCGCATAACCGTGTCCATACCGGTGTTAGACCCTATGAATGTGATATATGTTCTAAAAGTTTTATCGATAGTTCAACATTAATCAGGCATCAGAGAATACATACTGGAGAAAGACCATATAGTTGTGATATTTGTGGGAAGAAGTTTGCACAGAGTGTTTCAGTTAAAGCACATAGGAGAACACACACGGgTGATAAACCATTTAACTGTGGTATATGCAATAAAAGTTTTGCACAGCGTGGAAATCTAGAATCTCATAAAAGAACACACGTCGGCGAACGCCCTTTTCCTTGTGATGTATGCAATAAGAACTTTACACGTAGCTCTGACGTGATCAGACATAAAGAACGTAAACATAATATGCCAAAAACGCCGCCCGGTATGAGAAGAAAACCAGGAAGAAGATGTAAAGACGCCGCACCGAACGTTCCAGAATTAGTACCGATAATCCCGCCAACGGAAATACAAATGCATCACGTGCTGTTTGCGGCACAGCAGCAAATACAGAGACAACAgtag
Protein Sequence: MGERNGSFDKEAVNLKSDTDNGDINGDNLCIPKQENDQIDDAVKVENVTERKRSKRKRSHTNRYIRIPALDPIIYNKDNGVQQVRGDVFIKEENISDNDEYIPMHMNVELETTTELNKETKFENDDQDDEYMEMPVKVEMCSSDTEQPLCSDDEDYSPINYCITDMKEMDGTNGEIIRTSLAEKGLFQCEFCEKFLTAGDLTKHRRVHTGERPYRCEHCGMRFKQSSHLSKHRKTHTGERPYKCSSCDKSFTEASVLKIHEAIHSGLGPYRCDLCSASCQSTHDLIKHKRVHTNERPYRCHVCGKCFKQCGHLKTHMALHSDERPFQCDMCTKSFILSSHLKVHKALHTGLRPYKCDQCDKSYPSNGKLTQHKKTHSDDRPYKCGFCSKAYINSSDLKVHALSHSGVRPFAHQAYFKLETIMNSKNDSMKNIKQESNNLTEDNILATTSRPMDLEKDLTHTDDIGHNADNLLSYCEVNIEENPEQRLVFPSVDDVTDTEKLPFVCDICHKAFPRRSYLFAHNRVHTGVRPYECDICSKSFIDSSTLIRHQRIHTGERPYSCDICGKKFAQSVSVKAHRRTHTGDKPFNCGICNKSFAQRGNLESHKRTHVGERPFPCDVCNKNFTRSSDVIRHKERKHNMPKTPPGMRRKPGRRCKDAAPNVPELVPIIPPTEIQMHHVLFAAQQQIQRQQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -