Basic Information

Insect: Acanthacorydalis orientalis
Gene Symbol: Ift140
Assembly: GCA_034766995.1
Location: CM068319.1:16387165-16400090[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 4e-05 0.0057 18.2 1.5 1 23 1332 1354 1332 1354 0.97

2 18 0.059 8.3 8.3 3.2 1 20 1360 1379 1360 1382 0.92

3 18 0.0002 0.029 16.0 0.9 1 23 1388 1410 1388 1410 0.99

4 18 0.00015 0.021 16.4 2.7 1 21 1416 1436 1416 1438 0.94

5 18 6.1e-05 0.0086 17.6 4.6 1 23 1444 1466 1444 1466 0.99

6 18 5.9e-05 0.0082 17.7 5.3 1 23 1472 1494 1472 1494 0.97

7 18 1.7e-05 0.0025 19.4 7.2 1 23 1500 1522 1500 1522 0.97

8 18 2.3e-07 3.2e-05 25.3 2.7 1 23 1528 1550 1528 1550 0.98

9 18 0.00017 0.024 16.3 6.7 1 23 1556 1578 1556 1578 0.97

10 18 1.9e-05 0.0027 19.2 5.6 1 23 1584 1606 1584 1606 0.97

11 18 1.4e-06 0.0002 22.8 2.9 1 23 1612 1634 1612 1634 0.98

12 18 1.5e-05 0.0021 19.5 7.9 1 23 1640 1662 1640 1662 0.98

13 18 8.9e-06 0.0013 20.3 5.6 1 23 1668 1690 1668 1690 0.98

14 18 3.9e-05 0.0055 18.2 7.7 1 23 1696 1718 1696 1718 0.98

15 18 2.5e-05 0.0036 18.8 7.1 1 23 1724 1746 1724 1746 0.97

16 18 0.00012 0.017 16.7 0.8 1 23 1752 1774 1752 1774 0.98

17 18 0.055 7.8 8.3 4.7 1 23 1784 1806 1784 1806 0.98

18 18 1.6e-06 0.00023 22.6 0.9 1 23 1812 1834 1812 1834 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	4e-05	0.0057	18.2	1.5	1	23	1332	1354	1332	1354	0.97
2	18	0.059	8.3	8.3	3.2	1	20	1360	1379	1360	1382	0.92
3	18	0.0002	0.029	16.0	0.9	1	23	1388	1410	1388	1410	0.99
4	18	0.00015	0.021	16.4	2.7	1	21	1416	1436	1416	1438	0.94
5	18	6.1e-05	0.0086	17.6	4.6	1	23	1444	1466	1444	1466	0.99
6	18	5.9e-05	0.0082	17.7	5.3	1	23	1472	1494	1472	1494	0.97
7	18	1.7e-05	0.0025	19.4	7.2	1	23	1500	1522	1500	1522	0.97
8	18	2.3e-07	3.2e-05	25.3	2.7	1	23	1528	1550	1528	1550	0.98
9	18	0.00017	0.024	16.3	6.7	1	23	1556	1578	1556	1578	0.97
10	18	1.9e-05	0.0027	19.2	5.6	1	23	1584	1606	1584	1606	0.97
11	18	1.4e-06	0.0002	22.8	2.9	1	23	1612	1634	1612	1634	0.98
12	18	1.5e-05	0.0021	19.5	7.9	1	23	1640	1662	1640	1662	0.98
13	18	8.9e-06	0.0013	20.3	5.6	1	23	1668	1690	1668	1690	0.98
14	18	3.9e-05	0.0055	18.2	7.7	1	23	1696	1718	1696	1718	0.98
15	18	2.5e-05	0.0036	18.8	7.1	1	23	1724	1746	1724	1746	0.97
16	18	0.00012	0.017	16.7	0.8	1	23	1752	1774	1752	1774	0.98
17	18	0.055	7.8	8.3	4.7	1	23	1784	1806	1784	1806	0.98
18	18	1.6e-06	0.00023	22.6	0.9	1	23	1812	1834	1812	1834	0.96

Sequence Information

Coding Sequence: ATGACTCTATACTATGAAACAGCTGTTAAGTTTAAAGAAGAAGGGGCAATAACAACTAATGGGTTGTGGCATAATACTTATCCGATGCTTGCAGTAGCTAGTTATTCACAAGAACGAGGAGGATTTATTAGCATTTTTGATGATTTGgGGGAAATGTTACCTGAGATAGAACCGCCTTGGCATCCTGTAGCACAAGTAACAGCCTTAACTTGGCATCCTGAAAAACCTCTACTTGTTGTTGGTTGGGAAGACGGTGCATTACGTACTTGGGATAATACTGTACAAGGATTTAATACTGTATCTGCACCTCATAATGCCCCACTTATATTGTTGGGTTTTAGTGAAAAAGGAAGCCGATTGGTGTCAGCTGATtcgACAGGCTCATTAGTAGTTTGGAAAATAGATAGCCGTAATCAACTCTTTACTGCATTTCACCACAATATAAAAGAATCCATTACACATTTAGCATTTAGAAAAAGTGTACAAAGTAAAGTGCAACAAGAGATCGAAAATCTTGCTAAAGCAGCTGTAAATGGTGATGAAAAAGCTCTTGATCTACTTAGTAACTGGCGTCCACGTACAGCAGCTCACAAAGTTAATATGCATGCTAATAGTGCTGACAACCAATGTTTTTATATAGGAACACAATCCGgAGCATCGAAGGAAAAAATGAATGTTgatcatataattattactatgtTTGTTTCATCAGAACATAATGTTATGATTAAAGATATTATTCCTTATAATTCTGAAGCGCAATTAATTGCTTTTTGCTGTCCTTATACAGTTATACTTGAAAATGGAAATATTGTTCGAAATCTAATGTCAGATTTTAATGGGCTTGAAAAATATagtcaaaatacaaaaaaagcacTGATGGATTTTAGTTACAATTTAAGTttagGTAATGTGGATGCAGCAATACAGTCAATTCGTCTGCTTCCGGATAGTGGAAATGCTTGGAAAAGTCTTGCTCGTGTTTGTGTTTCTACACGTCGTGTAGATGTTGCAAAAGTTTGTTTAGGTCATATAGGAGCTGCAAGAGAGGTGAAAGCATTACGAGTAGCAATGGAACAATTAAAAGAACCTGAAGCTATAGTTGCTATGTTAGCAGTTCAGTTAGGTATGTTgGATGAAGCTgaagaattatataaacaatgtaaCAGATACGATTTATTAAATCGATTATATCAAGCTCGTAATAAATTTCCTGAAGCATCAGATGTTGCAACACGTTTTGATCGCATACATAAACGTGCCACAGCACATGCTTGGGCTAAATCCTTAGAAATCGCAGGCGATATACCCACAGCAATTCAACGATATGAAGTAGCAGGATGTCACCAACAAAATGTTCCCAGAATGTTACTGAATCAACCTCATGAATTAGaagaatatgtaaaaaagaataaagacaAAGATTTATTGAAATGGTGGGGTCAGTATTTAGAATCTACTGGAGATATGATACGAGCGCTTGCTGCATATGAAGCAGCaggtgattttttttcacaagtACGTGTGTTATGTTTTTCTCAACAAGTTGAGCGTGCTGCTCAAATAGCTCGATCTTCAGGTGATAGAGCTGCTGCTTATCACATGGCACGATATTATGAAAGTAATGAAGATATTGATAATGCAGTACTATTTTTCACAAAAGCTCAAGCGTAtaataATGCTATTCGATTATGTAAAGAACATGTTTTAAATGATGAACTGTGGAACATTGCTGTCGTTGCTGGAAAAAGAGATAAAATGGAATGtgcaaaatattttgaaaaattgtcagAAATGGATAAAGCTATATTACTTTATCATCAGTCAGgaaTGGTACATAAAGCGGTAGATTTGGCATTTAAATCGAAACAGTATGATACATTACAATCCATTTCAACTGATCTTGATACTGATTCTGATCCTGTTCTCATACAGAAGTGCGCAGATTACTTTGTAGAGAATCATCATTTTGAGAAAGCTGTAGATTTACTAGCAGCTGGAAAGaagtatacaGAAGCATTAGACATATGCTTAAAACATAATGTACAAGTGACTGAAGCATTGGCTGAACGTTTAACTCCTGAAAAAGAACAACTCGATGATGAAATGAGAATTTTTGTGCTGATTAAACTTGCAGAAAGTTTACAAACACAGGGTAATTATCACTTGGCCACAAAAAAGTTTACACAAGCAGGAGACAAAgttGAAATTGATGAATTTCAAAATTACGAAAAAGCCTTAGGTGCTCTAACTGAAGCAAATCGAGCTCTTTCAAAAGTTACTGCACCACGAGATATTACACAACATAAAAAGGCAACAGACAGAATTATGAATGAAATGGCAGCAATTCAGAGTTttattgatgtaaaaaaattatttgagcATGGTGACATATTAGCagGACTTACACAAGCAAAACAGTTGATAGTATCTAATGATccaaatattcaaacatatgtTCGTAAAGGAGATATTTATGCAGTTATGATTCAATATGCTCTTTCATCAGGAAATTTATCGGAAGTAAAACAGCTAATAATTGAATTACGACAGCATTTGATTGAAAGTGGAAATGTCAATTTGACATACTACTTAAGTGGAGAATTAATTCAAGCATTATCAAAAGCTTTAGGAATTCCAATAAGTGCATTAGTTCCACAAGAAACAAAAGTAGAAGTTGATGATGCTGAGCCAGAAATTGCTGAAGAAGAAAATCAAAGAGTGAGTCAACAACAAACTGTTTCATCTACAACAGTTCCCACAGACTTGCGTGTCAATACTGCTTTAAATGCAGTAACATTATCAAGTGTTGCGAAGTACTGggtattaacaaatttattaccTGGTCCAATTCCACAAATGTCAGTTTATGGACTTCCTACAACAACTCCTCGTGTTGAAAATGGGAAACCTTTACAGGATGGAATTTTGCAACAACATTCATCTCTTCTACCGTCCGATTCATTACTGTTACAACATCATAATACAAATACTGGTAATGTTAATGTCAACTCTCAAATTCCAGTAAGCATTGCAACTGCGCAAGGAGTAGCTAATATTACTATTCCTAGTTCTGCTATGCAACATCTTGAAAATCCGCAAGTTAATTCTTCACAACAAAATGAAGTACAAAGCCATATGAATTCCAATCAAAACAATGTACAGAATCAACAAAATCAATCATCTGCTGGTCATGTTTCTCAACATTCTCAACAATTAACTGCACCCAATAACAATGGACAACAGATGGGCAATCAGAATAATCCTGCAGCAAATCCACAAAATATGGTTCAAGTGCAAGTTCAAGATAATGTTATAAGTGTTATTGAAGATCAAAAAGACATTAAAGTAGATCCACTTACATTGACATCCCAAATGAATCAACAAGAAATGAATCATGACAATAGTCAACAGTTAAATCAGCAACAAAATTTAACAGTGCAACAATTACAACAACTTGGAGCAGATCAAGTTCTTGATAATGTTGATAATAATGATGGAACAATGAATGCACAGAATGAGCAAGATATGTTACAGATTGTAAAAGATGAAAAAGGAATCCAAAATTGTGCAAAGTTGTTATCAGGAACTCAGTTCAATTTAACAGATGTTAAAGGTAATTTTCAAGTTGCAAATATCAAACCTGAACATCATATGATGGATCTTAGGACAGCAGATGGTAGTATTGTGAAAATCTCTGCAGGAATTCATGAACAAGATCTTGCAAAAACACTTGGTGTTGAAATGGTTCAAAATATGTACAAAGTAAATGTTGAAGATATTAATCAGTTGCTAGCATATCATGAAGTTTTTGGTAAATTGCAGACAGATGTGCCAGTTGCACAAAGTACAGGTGCTCCAGTAACGAACGTTGTCCCACAACAAGGACCAGGCACAATTATGATTAAAGAAGGGGGAGAACAAGAGGCATCGACGAGTGCCGTTACTGGCGGGGGCGAGGGTGATGCTCCGACAACAATCGCTACAGGTACACACGTTTGTGACCTCTGTGGTAAAATGTTTCCGTTTCGTTATCAGTTAATCGTGCATCGTCGTTACCATACCGAACGTAAACCGTTTACCTGCCAAGTGTGTGGTAAAGCCTTTACGTGTGCAGCGGAATTATCTAGACATGGGAAGTGTCATCTTGGTGGTAGCATGTATACGTGTGCTGTCTGTTTTCATGTATTTGCAAATGCTGCTTCTCTCGAACGACATACAAAACGACATTCTACAGATAAACCGTACGCATGTGCTATTTGTGGTAAGAGTTTTGCTCGTAAAGAGCATCTCGATAATCACACACGTTGTCATACGGGCGAGACTCCTTACCGTTGTCAGTATTGTGCAAAGACATTCACTCGTAAAGAACATATGGTCAATCATGTGCGTAAACACACTGGTGAGACGCCGCATCGTTGTGAAATCtgtaaaaaatcttttacaCGTAAAGAACATTTTATGAATCATGTTATGTGGCATACCGGAGAGACACCACATCACTGTACCGTCTGTGGCAAAAAATACACACGAAAGGAGCATCTTGCAAATCATATGCGTTCTCATACAAACGATACACCGTTTCGTTGTGAAATTTGTGGAAAATCATTTACGAGGAAAGAACATTTTACGAATCACATCATGTGGCATACAGGGGAAACACCTCATCGGTgtgatttttgttcaaaaacttTTACACGAAAGGAACACTTATTAAATCATGTACGTCAACATACAGGTGAATCGCCTCATCGTTGTGGCTATTGTTCAAAGTCATTTACACGTAAAGAACATTTGATCAATCATGTACGACAGCATACGGGAGAAACACCATTTCGTTGCCAGTACTGTCCGAAAGCGTTTACACGGAAAGACCATCTTGTTAATCATGTGCGACAGCATACGGGAGAATCACcgcataaatgtacatattgtaCGAAGTCATTTACACGAAAAGAACATCTCACAAATCACGTGCGTCAGCATACCGGTGAATCGCCGCACCGTTGTGCATATTGTTCAAAATCGTTTACTCGTAAAGAACATTTAACGAATCACGTGCGAATTCATACGGGGGAATCCCCTCATCGTTGCGAATTTTGCCAGAAAACATTTACACGTAAAGAGCATTTGACGAATCATTTACGGCAACATACTGGTGAAACTCCGCATTGTTGTAATGTTTGCTCTAAACCTTTTACTCGAAAGGAGCATCTTATAAATCATATGCGTTCACATACAGGTGAACGGCCATTTTCCTGTACCGAATGTGGAAAATCTTTTCCTCTTAAAGGCAACTTACTGTTTCATCAGCGTTCGCATAATAAAGGTGCGAATGCCGAACGCCCATTCCGATGTGATATGTGTCCTAAGGACTTTATGTGTAAAGGTCATCTCGTATCACATCGTCGCTCACATAGTGGTGAGAGACCACATGCTTGTCCTGATTGTGGAAAAACGTTTGTAGAGAAGGGTAATATGCTTCGGCATTTACGTAAACATGCAGCAGATGCAGCAGCTCGTGCTGGTGCGACAGCTGTTCCAACTCCAAACGATGCTCGTCAGCAACAACCAAATGCTGCTACTGCTGCTAGTTTACAAATTGCTCAAGCCGCACAAGCAGCGCAAGCAGTCCAAGCACAgcagcaacaacaacaacagcagcagcagcaacaacagcagcagcagcagcaacaGCAACAATCTATAGCAGGCCCGCCTGGTACTACTCAAGCTGGAGTTATTTCACAGGCCGTTCCGTCCGTAGGACACATGCAGCTTCACCAGCAAGGGAATCATCCTGTTGTTGTTCCAACACCGAATGGAAATGTTCTCGCGTCATATTGA
Protein Sequence: MTLYYETAVKFKEEGAITTNGLWHNTYPMLAVASYSQERGGFISIFDDLGEMLPEIEPPWHPVAQVTALTWHPEKPLLVVGWEDGALRTWDNTVQGFNTVSAPHNAPLILLGFSEKGSRLVSADSTGSLVVWKIDSRNQLFTAFHHNIKESITHLAFRKSVQSKVQQEIENLAKAAVNGDEKALDLLSNWRPRTAAHKVNMHANSADNQCFYIGTQSGASKEKMNVDHIIITMFVSSEHNVMIKDIIPYNSEAQLIAFCCPYTVILENGNIVRNLMSDFNGLEKYSQNTKKALMDFSYNLSLGNVDAAIQSIRLLPDSGNAWKSLARVCVSTRRVDVAKVCLGHIGAAREVKALRVAMEQLKEPEAIVAMLAVQLGMLDEAEELYKQCNRYDLLNRLYQARNKFPEASDVATRFDRIHKRATAHAWAKSLEIAGDIPTAIQRYEVAGCHQQNVPRMLLNQPHELEEYVKKNKDKDLLKWWGQYLESTGDMIRALAAYEAAGDFFSQVRVLCFSQQVERAAQIARSSGDRAAAYHMARYYESNEDIDNAVLFFTKAQAYNNAIRLCKEHVLNDELWNIAVVAGKRDKMECAKYFEKLSEMDKAILLYHQSGMVHKAVDLAFKSKQYDTLQSISTDLDTDSDPVLIQKCADYFVENHHFEKAVDLLAAGKKYTEALDICLKHNVQVTEALAERLTPEKEQLDDEMRIFVLIKLAESLQTQGNYHLATKKFTQAGDKVEIDEFQNYEKALGALTEANRALSKVTAPRDITQHKKATDRIMNEMAAIQSFIDVKKLFEHGDILAGLTQAKQLIVSNDPNIQTYVRKGDIYAVMIQYALSSGNLSEVKQLIIELRQHLIESGNVNLTYYLSGELIQALSKALGIPISALVPQETKVEVDDAEPEIAEEENQRVSQQQTVSSTTVPTDLRVNTALNAVTLSSVAKYWVLTNLLPGPIPQMSVYGLPTTTPRVENGKPLQDGILQQHSSLLPSDSLLLQHHNTNTGNVNVNSQIPVSIATAQGVANITIPSSAMQHLENPQVNSSQQNEVQSHMNSNQNNVQNQQNQSSAGHVSQHSQQLTAPNNNGQQMGNQNNPAANPQNMVQVQVQDNVISVIEDQKDIKVDPLTLTSQMNQQEMNHDNSQQLNQQQNLTVQQLQQLGADQVLDNVDNNDGTMNAQNEQDMLQIVKDEKGIQNCAKLLSGTQFNLTDVKGNFQVANIKPEHHMMDLRTADGSIVKISAGIHEQDLAKTLGVEMVQNMYKVNVEDINQLLAYHEVFGKLQTDVPVAQSTGAPVTNVVPQQGPGTIMIKEGGEQEASTSAVTGGGEGDAPTTIATGTHVCDLCGKMFPFRYQLIVHRRYHTERKPFTCQVCGKAFTCAAELSRHGKCHLGGSMYTCAVCFHVFANAASLERHTKRHSTDKPYACAICGKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCTVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGYCSKSFTRKEHLINHVRQHTGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCTYCTKSFTRKEHLTNHVRQHTGESPHRCAYCSKSFTRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLRQHTGETPHCCNVCSKPFTRKEHLINHMRSHTGERPFSCTECGKSFPLKGNLLFHQRSHNKGANAERPFRCDMCPKDFMCKGHLVSHRRSHSGERPHACPDCGKTFVEKGNMLRHLRKHAADAAARAGATAVPTPNDARQQQPNAATAASLQIAQAAQAAQAVQAQQQQQQQQQQQQQQQQQQQQQSIAGPPGTTQAGVISQAVPSVGHMQLHQQGNHPVVVPTPNGNVLASY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -