Basic Information

Insect: Acanthacorydalis orientalis
Gene Symbol: BIB
Assembly: GCA_034766995.1
Location: CM068313.1:21777768-21782849[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 2.4 3.4e+02 3.2 1.6 1 14 19 32 19 43 0.90

2 25 8.2e-07 0.00012 23.5 1.6 1 23 49 71 49 71 0.97

3 25 0.0025 0.35 12.6 3.5 1 23 77 100 77 100 0.96

4 25 5.5e-05 0.0077 17.8 0.2 1 23 106 128 106 128 0.97

5 25 2.2e-05 0.003 19.1 2.5 1 23 134 156 134 156 0.98

6 25 0.0045 0.64 11.8 1.4 1 23 165 188 165 188 0.98

7 25 0.14 19 7.1 0.1 3 23 195 214 194 214 0.95

8 25 2.3e-06 0.00033 22.1 0.8 1 23 220 242 220 242 0.98

9 25 0.014 2 10.2 3.8 1 23 248 271 248 271 0.90

10 25 6e-06 0.00084 20.8 2.6 1 23 277 299 277 299 0.97

11 25 0.0018 0.26 13.0 3.3 1 23 308 331 308 331 0.95

12 25 0.00054 0.076 14.7 2.7 1 23 338 361 338 361 0.95

13 25 9.6 1.3e+03 1.3 0.1 3 11 369 377 368 388 0.79

14 25 4.1e-05 0.0057 18.2 3.5 1 23 394 416 394 416 0.98

15 25 8.9 1.2e+03 1.4 0.3 1 9 422 430 422 430 0.92

16 25 0.01 1.4 10.7 1.1 1 23 657 679 657 679 0.95

17 25 8.7e-05 0.012 17.2 2.0 1 23 684 706 684 706 0.97

18 25 0.00036 0.05 15.2 0.3 2 23 713 734 712 734 0.97

19 25 0.0081 1.1 11.0 1.1 1 23 740 762 740 762 0.95

20 25 2.1e-05 0.0029 19.1 0.5 1 23 768 791 768 791 0.97

21 25 1.3e-05 0.0018 19.8 2.6 2 23 803 824 803 824 0.97

22 25 0.003 0.42 12.3 2.2 3 23 832 852 831 852 0.98

23 25 1.6e-05 0.0023 19.4 2.1 1 23 858 880 858 880 0.99

24 25 1.4e-06 0.0002 22.8 1.5 1 23 886 908 886 908 0.97

25 25 0.084 12 7.8 3.9 1 22 914 935 914 939 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	2.4	3.4e+02	3.2	1.6	1	14	19	32	19	43	0.90
2	25	8.2e-07	0.00012	23.5	1.6	1	23	49	71	49	71	0.97
3	25	0.0025	0.35	12.6	3.5	1	23	77	100	77	100	0.96
4	25	5.5e-05	0.0077	17.8	0.2	1	23	106	128	106	128	0.97
5	25	2.2e-05	0.003	19.1	2.5	1	23	134	156	134	156	0.98
6	25	0.0045	0.64	11.8	1.4	1	23	165	188	165	188	0.98
7	25	0.14	19	7.1	0.1	3	23	195	214	194	214	0.95
8	25	2.3e-06	0.00033	22.1	0.8	1	23	220	242	220	242	0.98
9	25	0.014	2	10.2	3.8	1	23	248	271	248	271	0.90
10	25	6e-06	0.00084	20.8	2.6	1	23	277	299	277	299	0.97
11	25	0.0018	0.26	13.0	3.3	1	23	308	331	308	331	0.95
12	25	0.00054	0.076	14.7	2.7	1	23	338	361	338	361	0.95
13	25	9.6	1.3e+03	1.3	0.1	3	11	369	377	368	388	0.79
14	25	4.1e-05	0.0057	18.2	3.5	1	23	394	416	394	416	0.98
15	25	8.9	1.2e+03	1.4	0.3	1	9	422	430	422	430	0.92
16	25	0.01	1.4	10.7	1.1	1	23	657	679	657	679	0.95
17	25	8.7e-05	0.012	17.2	2.0	1	23	684	706	684	706	0.97
18	25	0.00036	0.05	15.2	0.3	2	23	713	734	712	734	0.97
19	25	0.0081	1.1	11.0	1.1	1	23	740	762	740	762	0.95
20	25	2.1e-05	0.0029	19.1	0.5	1	23	768	791	768	791	0.97
21	25	1.3e-05	0.0018	19.8	2.6	2	23	803	824	803	824	0.97
22	25	0.003	0.42	12.3	2.2	3	23	832	852	831	852	0.98
23	25	1.6e-05	0.0023	19.4	2.1	1	23	858	880	858	880	0.99
24	25	1.4e-06	0.0002	22.8	1.5	1	23	886	908	886	908	0.97
25	25	0.084	12	7.8	3.9	1	22	914	935	914	939	0.93

Sequence Information

Coding Sequence: atgaaaaaagaaatcggAGACGATTCAATAAGTTTAAACGAGACCGCAACAACTTACCATTGTGAGACATGCAATGGAACGTTTAAAAcacaaaAGTTGTGTATTTTAAAGAGTCATACCGTAATGCATACACTAGAACGACCGTTTATATGCGACATCTGTAACAAAGCGTTTAAACGAAAAggtgaattaaaaaaacacaagacTACACACGCTGCAACCAAACAACATTCTTGTTTACAGTGTAATTATAGAACTACGTTTAAATCGAATCTCGAATTGCATATAAAGAGATTACATAGCAAAGGCAACCAATTCAGTTGTCCTGATTGTCCTAAGAAATATTATACGAAAATAGATTATGAAAGGCACGTGGCGATACatgcagaaattaaaaaatattcttgtgaTATTTGCGGTAAATCGTATCCGTATCATTCGAGTTTCCTCATTCACAGACGAAAACACGATCCCGATTACATCCAAAAAACGTACACGTGCGAATTTTGCGGGTATTCGACATTGCGGCCGACGTATTTGCGTTATCATATTCAAACACGGCATTTGGGCTATTTTGAAATCTGCGACATATGCGGTAAACAAGTGTCCGCTCCGTATCTTGCACGACACAAACAACTTCACTCTGAAATCAAACCGTTTAAATGTTCGGTGTGCGGTAAAAGCTTTGTAAAAAACACATATCTGGTAAATCACGAGCGAATCCACACTGGAGTCAAACCGTTCCAGTGCAAAGAATGCGGTCAGTGTTTTGCTCAAAAGATCACtcATCTGACATCTCATATGGTTTCGCATAGTACAAAACGACCATTTTCCTGCGATTTGTGTGATAAAACGTATAAAAGAAACACTGATTTACGAAAACATAGAAACCTTCATACGGTTCATTCTGAAAAAAAGCAATTCTCGTGCATGGAGTGTGGTAAATCGTATCCGTACTACTCTAGTTTACTCACCCACAAACATAAATATCATCTGCGTAAAGAAAATGCATTCACGTGCGAATTTTGCGGGCATATGACGAAAACGAAAGGGATGCTACAAAAACACATTGAATACAGGCACGGggaaaagaaatatgaaatatgtgatGTGTGTGGTAAACAAGTCAGTTTACAGTACCTTCCTTTACATAAACTTATACATACAGGCGACAAACCGTATCAGTGTAAGATATGTAAAAAGTCATTCGCAATGAAAGGTTCACTCAGTAGACATGAGAAACACCATACTGGATACGCTCCATACGTTTGCACGTTATGTCCAAAATCAAATCTGTTTGGAAACTTCAAGAACGTAATTGTAAAAACAGATCCAGGCGAATTTGAACCTTTAATCACTATAACTGAATTACCACTTAAAGCAAATCAAGGAAGATCAAATAAACAAAGTAAATCTGATTCCGATGACGATGATTTATTGTTGTCAGAATTACAATTAactaaaaaagagaaaaaaactagTTCGACGCCAAAAGGACGAAAGAAATCAAATTCGAAAAATGTGTCtgctaagaaaaaaatgaaagacaGTGATAACGATGAAGAGTATAAGCCATATAAAAAGGTGAAATCTaaaccaaaaataaaagaagaaccaattgaacataaaataaagGAAGAACCGCAAGACACGGAGGAAGAGATCGACGAATATCAAAATCCATTTAATTACGGTTTCGATATACCGCAAAAACCAGCTCGCAAACGTAAACCTTTCAATAAACAGACTGTAAATACTGAAGTGCGTACAAAAGTTAAATCTAAATGGTCGTGTTTAATATGTCTGGCAGACATGGCTTCAAAAGATGCGTTGATCGCTCATTACGCAATACATAAAGATGATCCAATAAAACAAGAAAACGATACAAGTACGGAACCTCGAAGTACTGGAACCCATTTCATGCAACCGTCTCCACCATCGAACACTAATCCAAATGGTAATACTCTATATGTATGCCAACCATGCGGCAAATCCTGCGAATcggaaaaaatgttaaagaaacaTTCTGAAGTACATTTTGAAGAACGTTTTCATTGcgaaatatgcaataaaatttttaaacggGCTTATGAATATTCTGTACATTCTCGAGTACACAACAACGAACCGAAATTAAAATGCGATCTTTGTGATTATGAGACAATCTATCAGAGCGCTCTGAAAACCCACATACAACGCCATGAAGCTAATTATAAGTACAAATGTGAAATCTGCAACAAAGGGTTTTTTGCTCAAACTTGGTACGAAGAACACAAGAATTTCCATACAGGGGCTAAACCGTTTGTATGCGATATATGTGATAAGCCGTTCGCTTACACCCGTTACTTGACAGCGCATAAACGCAGTATGCATCCGGAGAGCTATAGAGACGATCCAGTGATCAATGAGTGTAACATTTGCCAGAAACGTTTTGCgcacaaaaaaagtttaatgctGCACATGAGAGGTCACACGGGAGAAAATACTGTACTTTGCGACATATGCGGTAAACGTTTGTCAAGTAATGAACATTTGAAATTCCATCGAAGAATACATACCGGTTATAAGCCATACACGTGTGATGTGTGCAGCAAAGGATTCGCCAAGAAATGTAATTTAACTTTACATTTACGAGTCCACAGCGGCGAAAAACCTTACATTTGTGATGTCTGCGGAAAATGTTTCTCGCAACGTTCGACTTTAGTGATTCATGAACGGTATCATACAGGCCATCGTCCTTATACTTGTCACCTTTGTCATAAAGGCTTCGTAGCGAAAGGTGTTCTAAGTATTCACCTTAAGAGTTGTAATAAGCACACCATAATGGGCGGAATAGGACttttagaataa
Protein Sequence: MKKEIGDDSISLNETATTYHCETCNGTFKTQKLCILKSHTVMHTLERPFICDICNKAFKRKGELKKHKTTHAATKQHSCLQCNYRTTFKSNLELHIKRLHSKGNQFSCPDCPKKYYTKIDYERHVAIHAEIKKYSCDICGKSYPYHSSFLIHRRKHDPDYIQKTYTCEFCGYSTLRPTYLRYHIQTRHLGYFEICDICGKQVSAPYLARHKQLHSEIKPFKCSVCGKSFVKNTYLVNHERIHTGVKPFQCKECGQCFAQKITHLTSHMVSHSTKRPFSCDLCDKTYKRNTDLRKHRNLHTVHSEKKQFSCMECGKSYPYYSSLLTHKHKYHLRKENAFTCEFCGHMTKTKGMLQKHIEYRHGEKKYEICDVCGKQVSLQYLPLHKLIHTGDKPYQCKICKKSFAMKGSLSRHEKHHTGYAPYVCTLCPKSNLFGNFKNVIVKTDPGEFEPLITITELPLKANQGRSNKQSKSDSDDDDLLLSELQLTKKEKKTSSTPKGRKKSNSKNVSAKKKMKDSDNDEEYKPYKKVKSKPKIKEEPIEHKIKEEPQDTEEEIDEYQNPFNYGFDIPQKPARKRKPFNKQTVNTEVRTKVKSKWSCLICLADMASKDALIAHYAIHKDDPIKQENDTSTEPRSTGTHFMQPSPPSNTNPNGNTLYVCQPCGKSCESEKMLKKHSEVHFEERFHCEICNKIFKRAYEYSVHSRVHNNEPKLKCDLCDYETIYQSALKTHIQRHEANYKYKCEICNKGFFAQTWYEEHKNFHTGAKPFVCDICDKPFAYTRYLTAHKRSMHPESYRDDPVINECNICQKRFAHKKSLMLHMRGHTGENTVLCDICGKRLSSNEHLKFHRRIHTGYKPYTCDVCSKGFAKKCNLTLHLRVHSGEKPYICDVCGKCFSQRSTLVIHERYHTGHRPYTCHLCHKGFVAKGVLSIHLKSCNKHTIMGGIGLLE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -