Aori010246.1
Basic Information
- Insect
- Acanthacorydalis orientalis
- Gene Symbol
- ZNF784
- Assembly
- GCA_034766995.1
- Location
- CM068315.1:26259873-26264512[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 1.3e-05 0.0019 19.7 3.6 1 23 12 34 12 34 0.97 2 23 1.4e-05 0.002 19.7 0.3 1 23 40 62 40 62 0.99 3 23 5e-05 0.007 17.9 0.6 2 23 68 89 67 89 0.97 4 23 1.8e-05 0.0025 19.3 1.1 1 23 94 116 94 116 0.98 5 23 3.7e-05 0.0052 18.3 2.7 1 23 122 145 122 145 0.97 6 23 0.71 99 4.9 0.1 2 23 154 172 153 172 0.90 7 23 0.049 6.9 8.5 1.3 1 23 178 201 178 201 0.95 8 23 0.018 2.5 9.9 0.8 1 23 214 236 214 236 0.92 9 23 3.6e-05 0.0051 18.3 1.2 1 23 242 264 242 264 0.97 10 23 0.76 1.1e+02 4.8 1.1 1 13 270 282 270 284 0.91 11 23 3.1 4.3e+02 2.8 0.2 2 17 294 309 293 310 0.91 12 23 0.00023 0.032 15.9 0.1 2 23 505 526 504 526 0.97 13 23 1.4e-05 0.0019 19.7 5.0 1 23 534 556 534 556 0.98 14 23 0.00036 0.05 15.2 0.3 1 23 562 584 562 584 0.99 15 23 0.00053 0.075 14.7 0.2 2 23 590 612 589 612 0.95 16 23 4.1e-05 0.0058 18.2 1.1 1 23 617 639 617 639 0.97 17 23 4.4e-05 0.0061 18.1 2.7 1 23 645 668 645 668 0.97 18 23 3.3 4.6e+02 2.8 0.5 3 23 677 694 676 694 0.71 19 23 2.8e-05 0.004 18.7 0.9 1 23 700 723 700 723 0.95 20 23 0.00056 0.079 14.6 3.5 1 23 734 756 734 756 0.96 21 23 1.4e-05 0.002 19.6 1.1 1 23 762 784 762 784 0.98 22 23 0.00065 0.092 14.4 4.0 1 23 790 812 790 812 0.99 23 23 2.8e-08 3.9e-06 28.2 1.9 1 23 818 840 818 840 0.98
Sequence Information
- Coding Sequence
- ATGGAAGTGCACGATGAGGGTCGTGAATTCAGGCACATATGTAATGTTTGTAAGAAAGGATTTTATGAGAAGAGCCAGTTAACAAAACATTTACGTAGGCATCGCGGCGAGACTAGATATAAATGTGAATTATGTTCGAAAGCTTTTTATGAACTTAGTGCATTGGCCGTGCATATGAAGAAACATAATGTTGACCCCTTAAGGTGCactttttgtgataaaatattttatgtacaacagCAACTAGAAGCACATGTGAAAACTcataattcagaaatatttagaTGCGGAGAATGCAGTAAAGAATTTAGAACGGCCAAATATTTACAATCTCATCGATTAGTGCACGTAAAggtACGCATGTATTCATGTCTACTATGTGACAAATCGTTCAAAGATGATTCAGCATTACGGAATCATCATAAACGAATGCACGCAGGTGTACCTCGTGAACCTGACGTGTGTGCCGTATGCGGTAAAGCGGTTAAATTACTGGCTCGTCACATGCTACGTCACGGTGGTGAGAGACCTTACAAATGTGATAGGTGCCCACGAGCTTTCCTCCGTAAATGTGATTTAGACGATCACGCTCGAGCACGTCATCGTGATGCAGACAGCGATAATAAAAGATCATATCCGTACTTATGTGCTGCCTGTGGTAAACGGTGTGCATCGACAACACAATTACGAGTTCACACTCAAGCTCATACTGGAGAGAGACCGTTTGCGTGCCGATTATGTGATAAACGTTATAGAACGAATTTTTTACTGACCGCGCATGTTCGCAGCCATACTGAAGAAAGGCCGTTTGTGTGTGATGTGTGTCGTAAAGGATTTTATACGAAACATGTAACAAAAACGGACGGACTTCCTGAATTAATATGTTCAGATTGTTCTGAACAAGTAAATCGATCATATAACTTTAAGTTACTGTGTGAAAATTCAAACAAGTTATTACATCAgataattaaaagtgaaaaaagtcCAAAAATTGAAGTATGTGCAAAAATCgaagaaaaaattgaacaagCAGAGCCTGTTGCTAATgaacttttaaatgttaaaaccgAGGAGAAGGTTGATATAGAGGAATCGTTTGAAGGATTTAATGGGTATGCAGAAACACTCGATCCGGTGAAAATAAAATCGGATGTTTTTGAAAACCAAGAAGCacgaaaaactgaaattaatgaCGTGATTTGCGATGATGTGAAAGATGAAGACAATGGATTTTCTTCAGACGGAAGCTCATATGAAGGGCCTTCAAAACTCGATAATAATGATGATAATTCTGCAAATTCTAAATATGTGAGTGATGAACAAGCAGATCTAAAACCAGTTAGGAAAAAAAGTTCAGATTCATGTGCATCAGATGATTTTTTTGGACCTCCAAATAGCGGTATCTTAAATTCTACATATGATTCTTTAACTGCAGAGAAACAATCAATAACAGGAATGCGTGTAAAAAAAGCAATAATGATGGGTCCTGAAATGTGTGACCCTACGACACTAACTTGCAAAATTTGTGATAAGGTTCTTGTTAACATATACTCACTAGGTAGACATATGGAAATGCATGACGATGATAGAGAGTTCAGACATACGTGTCATGTTTGCAATAAAGGTTTTTATGAAAAAGGGCAGCTCACTAAACATATTCGAAGACACAAAGGGGAAACACGATATAAATGTGAATTGTGTTCAAAGgGTTTTTATGAACTAAGCGCCGTTGCAGTTCATATGAAAAAACATAAAGTGAAACCGACTCCCTGCCCGACATGTAAGAAACCTTTCTATGTTCGCCAACAACTCGAAATTCACATAGCGAAGAAACATCCGACAGATCGACACACTTGTGCCAAGTGTGGTAAAGAGTTTCAAAATGCGCGTTATCTTCAAGTACATCAATTGGTTCACGTAAAAGTACGTATGTTTCCCTGTTTATTGTGTGATAAATCGTTCAAGAATGATGAAAGTCTCCGCAAACATCATAAAAGAGTACATGTCGAAGAACCTAAACTCGAGATATGTAACGTTTGTGGAAAAGCTGTTAAGTTGATGAAAACACACCTTATGAAGCACAGTGGTGAAAGACCTTTTAAATGTGAACAATGCCCTCGAGCATATATATCTAAGTCACAGCTAAAGTCTCATCGCGATGTAAAACACGGAGATGGAGCCAGAACTAGAAAATATCCTTTCTTGTGCAGTATTTGTGGAAAGCCATGTCAAACGACGACACAACTAAGAAATCATACAAGAAAGCATACAGGGGAAAGGCCATTCAACTGCCGACtatgtgataaaaaatacaagacTAATGGAGCACTTACGATACATTTGAGATCTCACACCGAAGAAAGACCGTATGTTTGTGATGTATGTCATAAAGGTTTCTACAcaagtacaattttaaaacatcatGTGAGAACACATACAGGTGAAAGACCACATAAGTGTGATATTTGTGGTCGTGCATTTTCACAAAATTCTTCACTTAAGACACATATGAAAGTACATTAA
- Protein Sequence
- MEVHDEGREFRHICNVCKKGFYEKSQLTKHLRRHRGETRYKCELCSKAFYELSALAVHMKKHNVDPLRCTFCDKIFYVQQQLEAHVKTHNSEIFRCGECSKEFRTAKYLQSHRLVHVKVRMYSCLLCDKSFKDDSALRNHHKRMHAGVPREPDVCAVCGKAVKLLARHMLRHGGERPYKCDRCPRAFLRKCDLDDHARARHRDADSDNKRSYPYLCAACGKRCASTTQLRVHTQAHTGERPFACRLCDKRYRTNFLLTAHVRSHTEERPFVCDVCRKGFYTKHVTKTDGLPELICSDCSEQVNRSYNFKLLCENSNKLLHQIIKSEKSPKIEVCAKIEEKIEQAEPVANELLNVKTEEKVDIEESFEGFNGYAETLDPVKIKSDVFENQEARKTEINDVICDDVKDEDNGFSSDGSSYEGPSKLDNNDDNSANSKYVSDEQADLKPVRKKSSDSCASDDFFGPPNSGILNSTYDSLTAEKQSITGMRVKKAIMMGPEMCDPTTLTCKICDKVLVNIYSLGRHMEMHDDDREFRHTCHVCNKGFYEKGQLTKHIRRHKGETRYKCELCSKGFYELSAVAVHMKKHKVKPTPCPTCKKPFYVRQQLEIHIAKKHPTDRHTCAKCGKEFQNARYLQVHQLVHVKVRMFPCLLCDKSFKNDESLRKHHKRVHVEEPKLEICNVCGKAVKLMKTHLMKHSGERPFKCEQCPRAYISKSQLKSHRDVKHGDGARTRKYPFLCSICGKPCQTTTQLRNHTRKHTGERPFNCRLCDKKYKTNGALTIHLRSHTEERPYVCDVCHKGFYTSTILKHHVRTHTGERPHKCDICGRAFSQNSSLKTHMKVH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -