Aori021803.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Acanthacorydalis orientalis
Gene Symbol
-
Assembly
GCA_034766995.1
Location
CM068318.1:44652526-44658095[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 3.2e-06 0.00045 21.7 2.1 1 23 151 173 151 173 0.99
2 19 1.7e-06 0.00024 22.6 0.6 1 19 179 197 179 201 0.94
3 19 5.9e-07 8.3e-05 24.0 1.4 1 23 207 229 207 229 0.97
4 19 1.4e-05 0.002 19.7 2.0 1 23 235 257 235 257 0.95
5 19 0.011 1.5 10.6 3.0 1 19 263 281 263 285 0.89
6 19 0.0073 1 11.1 0.8 1 16 291 306 291 308 0.89
7 19 5.1e-06 0.00072 21.0 2.9 1 23 405 427 405 427 0.99
8 19 1.7e-05 0.0023 19.4 0.7 1 23 433 455 433 455 0.98
9 19 3.3e-05 0.0047 18.5 4.3 1 23 461 483 461 483 0.97
10 19 5.7e-05 0.008 17.8 0.7 1 23 489 511 489 511 0.94
11 19 0.00045 0.063 14.9 2.3 1 20 517 536 517 539 0.92
12 19 0.07 9.9 8.0 2.1 1 23 545 567 545 567 0.91
13 19 4.3e-05 0.0061 18.1 2.2 1 23 671 693 671 693 0.99
14 19 1.2e-06 0.00016 23.1 2.6 1 23 699 721 699 721 0.99
15 19 3.7e-07 5.3e-05 24.6 1.4 1 23 727 749 727 749 0.98
16 19 7.1e-06 0.001 20.6 2.1 1 23 755 777 755 777 0.95
17 19 0.00022 0.031 15.9 6.6 1 23 783 805 783 805 0.98
18 19 0.0052 0.73 11.6 3.1 1 23 811 833 811 833 0.92
19 19 1.4e-05 0.002 19.6 6.1 1 23 839 861 839 861 0.98

Sequence Information

Coding Sequence
ATGTTTCTCGATCTCTGTAGACAGTGCATTAATTCAGATTCGATTCTAAGAAACACTCAAAACTCACATGTAAAAAATAGTCTACCAGAATTAAAAAACGATGATACGATAATAAAAACCGAAAACGATATCGATGATTGGCACGAATACGGTTCAGGGACTGgagatttaataaatgatagttATTCTCCGTTTGTATTCATAACGGTCAAAGAGAACacagaaaaaaacataactGAATGGTACTCTAAGGAAGAAGTTGGTATCCGTGAAGAGAATGTACCGTTAGAACAAAAACCTGATaataatgtatgtttaatagagaaatgtgttgaaaataatacagaGAAGAAAGTAGAAGAAAAGGTTAatgttattgataaaaaaaggtCAGATGAAATCTCTTCAGGAAATAAACCAAAGAGCAGAAGAAGAGGTTGTACAGTCAAGTTCCAATGTGATAAGTGTGAAAAGCGATATTCTCGAAAAGATGAGTATGAATTGCATCTTCGGACTCATATCGGCGAACGTCCGTACAAATGTCCTCTTTGTCCTAAGTCGTTCACACGGAAAGCAAATCTCAATATACACAGTTGGACGCACTCTGGCAAACGGCCTTTTAATTGCGACAGATGCGGCAAGTCGTTCACACAGAAGAACAACTTACTCAGCCATATGACTGTACATACTGGCGAACGAAGGTTCCTTTGTGAAATATGTTCTAAGACATTTTCTCAAAAGAACCATCTCATATCGCATGCACTCACACATACCGGGGAAAAGTCATATGAGTGTAAAACCTGTGGGAAGAAATTCATGCGCAAGCGTGCTTTAAAATGTCACGAACCCACACATTCAGGTCTGAAACCTTTTAAGTGTGAGACTTGTGGTAAAGCGTTCTCAAAAAGGGAGGAATACAGTTCAGGGACTGGAGATTTGATAAATGATAGTTATTCTCCATTTGTATTCATAACGGTCAAAGAAAACATTGAAGAAAACTTAACTGATTGGTACTCCAAGGAAGAAGTCGGTATCCCTGAAGGGAATGTATCATTAGAACAAAGAGCTGATaataatgtatgtttaataGAGAAATGTATTGAGAATaatacagagaaaaaaatagaagaaaagaTTAATGTTATTGGTAAAAAAAGGTCGAATGAAATCTCTTCAGGAAACCCAAAGACCAGAAGAGGTTGTACAGTCAAATTCCAGTGTGATAAATGCGAAAAGCGATATTCTCGAAAGTACGACTATGAATTACATCTCCGCACTCATACCGGCGAACGTCCGTACAATTGTCCTCTTTGTCTAAAGTCGTTCGCACGGAAAGTAACTCTTAATATACACAGTCGGACGCACTCCAGCAAACGGCCTTTTAGTTGTGATAGATGCAGCAAGTCGTTCACACAGAAGACCCACTTGCTCAGCCACATGTCCTTACATACTGGTGAACGGAGGTTCCTTTGTGAAATATGTTCTAAGACATTTTCTCAAAAGATCCAATTGATTTCGCACGCATTCACACATACCGGGGAAAAGTCATACGAGTGTAAAACTTGTGGAAAAAAATTCATGCATAAGCTCGCTTTAAAAAGACATGAACCCACACATTCAGATCGGAAACCTTTTAAGTGTGAGACTTGTGGTAAAGCGTTCTTGAGAAGAGAGGCTTGTAAAACCCACGAACAGATTCATACAGGTGAGTACGGTTCAGGGACAGgagatttaataaatgatacgtATTCTCCATTTGTATTCATAACAGTCAAAGAGAATACTGAAAAAAACTTAAATGATTGGTTTTCTAAGGAAGAAGTCGGTATCTCTGAAGGGAATGTATCGTTAGAACAAAAACCTGATaataatgtatgtttaataGAGAAATACATTGACAATAATACAGAGAAAAAATTAGAAGCAGGTAATGTTATTGATAAGAAAAGTCAGAATGAAATCTGTTCAGAGAAGAAACCAAAGAGTAGAAGAAGAGGTTGTACAATCAAGTTCCAGTGTGATAATTGTGAAAAGCGATATTTTCGAAAGGACGAGTATGAATTGCATCTCCGGACTCATACCGGGGAACGTCCGTACAAATGTCATCTTTGCCCGAAGTCGTTCGCACAGAAAGTAACTCTCAATAGGCACAGTCGAGTACACTCTGGCAAACGGCCTTTTAGCTGTGACAGATGCGGCAAGTCATTCACACAGAAGAACAACTTGCTCAGTCACATGACCGTGCATACCGGTGAACGGAGTTTCCTTTGTGAAATATGTTCGAAGACGTTTTCTCAAAAGAGCCATCTCATATATCATGCACTCACACATACCGGGGAAAAGTCGTACGAGTGTAAAACTTGTGGGAAGAAATTCATGCACAAGTGTGCTTTAAAAAGACACGAATCCACACATTCAGATCTGAAACCTTTTAAGTGTGAGACTTGTGGTAAAGCGTTCTCGACAAGGGAGGTTTGTAAAAAACATGAACAGCTTCATACAGGTATAAAACCCCATAAATGTCATATTTGTAATCGAGCGTTCGGGAGAAAAGATAAACTTAAAACGCATTTGAAAACACACTCGAATGAGAATGTATAG
Protein Sequence
MFLDLCRQCINSDSILRNTQNSHVKNSLPELKNDDTIIKTENDIDDWHEYGSGTGDLINDSYSPFVFITVKENTEKNITEWYSKEEVGIREENVPLEQKPDNNVCLIEKCVENNTEKKVEEKVNVIDKKRSDEISSGNKPKSRRRGCTVKFQCDKCEKRYSRKDEYELHLRTHIGERPYKCPLCPKSFTRKANLNIHSWTHSGKRPFNCDRCGKSFTQKNNLLSHMTVHTGERRFLCEICSKTFSQKNHLISHALTHTGEKSYECKTCGKKFMRKRALKCHEPTHSGLKPFKCETCGKAFSKREEYSSGTGDLINDSYSPFVFITVKENIEENLTDWYSKEEVGIPEGNVSLEQRADNNVCLIEKCIENNTEKKIEEKINVIGKKRSNEISSGNPKTRRGCTVKFQCDKCEKRYSRKYDYELHLRTHTGERPYNCPLCLKSFARKVTLNIHSRTHSSKRPFSCDRCSKSFTQKTHLLSHMSLHTGERRFLCEICSKTFSQKIQLISHAFTHTGEKSYECKTCGKKFMHKLALKRHEPTHSDRKPFKCETCGKAFLRREACKTHEQIHTGEYGSGTGDLINDTYSPFVFITVKENTEKNLNDWFSKEEVGISEGNVSLEQKPDNNVCLIEKYIDNNTEKKLEAGNVIDKKSQNEICSEKKPKSRRRGCTIKFQCDNCEKRYFRKDEYELHLRTHTGERPYKCHLCPKSFAQKVTLNRHSRVHSGKRPFSCDRCGKSFTQKNNLLSHMTVHTGERSFLCEICSKTFSQKSHLIYHALTHTGEKSYECKTCGKKFMHKCALKRHESTHSDLKPFKCETCGKAFSTREVCKKHEQLHTGIKPHKCHICNRAFGRKDKLKTHLKTHSNENV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-