Aori017557.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Acanthacorydalis orientalis
Gene Symbol
-
Assembly
GCA_034766995.1
Location
CM068317.1:27377879-27387155[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 2.8e-06 0.00039 21.9 2.2 1 23 159 181 159 181 0.98
2 19 3.8e-05 0.0053 18.3 1.2 1 23 187 209 187 209 0.98
3 19 0.00074 0.1 14.2 0.6 2 23 216 237 215 237 0.97
4 19 9e-07 0.00013 23.4 2.2 1 23 243 265 243 265 0.98
5 19 8.6e-07 0.00012 23.5 1.2 1 23 271 293 271 293 0.99
6 19 0.16 22 6.9 0.4 2 23 301 319 300 319 0.83
7 19 1.1e-06 0.00015 23.2 0.7 1 23 325 347 325 347 0.99
8 19 4.7e-05 0.0066 18.0 0.4 3 23 358 378 357 378 0.99
9 19 1.5e-05 0.0022 19.5 0.1 1 23 384 406 384 406 0.98
10 19 1.6e-07 2.2e-05 25.8 0.8 1 23 412 434 412 434 0.99
11 19 7.9e-08 1.1e-05 26.7 0.5 1 23 440 462 440 462 0.99
12 19 1.7e-05 0.0024 19.4 2.9 1 23 485 507 485 507 0.99
13 19 0.00052 0.073 14.7 0.7 2 23 514 536 513 536 0.95
14 19 2.2 3.1e+02 3.3 0.1 9 20 542 553 541 556 0.88
15 19 0.00037 0.052 15.2 4.8 3 23 567 587 565 587 0.97
16 19 1.3e-06 0.00018 23.0 0.1 1 23 594 616 594 616 0.98
17 19 2.1e-06 0.00029 22.3 0.1 1 23 622 644 622 644 0.98
18 19 1.7e-07 2.4e-05 25.7 0.8 1 23 650 672 650 672 0.99
19 19 1.4e-06 0.0002 22.8 0.9 1 23 678 700 678 700 0.99

Sequence Information

Coding Sequence
atgcCATTGGAACGTGAATATTTCTCCGAAAATCCAATAGAAATGTTGTACGATTGTAATTTGTCCAGTATTAAAAGTCGAAGACAAAGATTAGAAGATCGCTTTACAAAGGAATGTACAAATCAATCCAATAAAGAAGTAAATCATAGTTGTAGAACTGTACTAAGTACATTATCAAAATTAAGTACCACAAGAAGTATGTTACGTTCAAGTGCagcaaaaatatcaaaaactttCAGTGACGTGAAAACAACACTGGGATCATTTTCACAAAAATTTCGACGTTCAACAAAACGACGAAAAATACTTATCGAAGGACCTGTTACTCCAATTTGTGAAACACCCAGAACATGTATTCGTAAGACACTTGGTCGGACACCAACAAAATTATATAGTCCTTTTGGTATTGAATCACCAGTAAAAACACCATCTTTATACAGACATGAGTTAACACATGATGCAAATCGTAGAACACATGAATGTTCAATTTGTCAACAAAGATTCGCTGAAAagggaaatttaaaaaaacatatcagaCGTCATATTGGTGATAAAACACACAAATGTAGTGAATGTCCAAAAAGTTATTATGAGTTGAGTGCTCTTGCCAGACATGTTAAAAGACATTGGTATATCCAACCTGTTAAATGCAAAGAGTGTGATCAAAGTTTTATGTTGAAAGAACAACTTGAAATGcattcaaaaatacatataactgGAAAAGCATTCTCTTGTAAACAATGTGGGAAagcatttgtttataaatatcttcTTAGAAGACATGAAAAGACACACACTAATGACCATCCATATCAGTGTACTTTATGTGAAAAGTCATTTAAACAATCAGTTTCTTTAAATGCTCATGTAAAAAAACATCTTGGACAAGTAAAGAAAACAGTGTGTAATGTATGTGGTATTTCTTTTGTCAATATTAAAATGCACATGATGAAACATACAACTGAGAGGCCTTATCAATGCCCCGAATGTGGAAAAGGTCTACGAACAACTGTTCATTTAAGAGAACATATGCGATTACACACTGGAGAAAAAAGAATACCTTCAGCATTGTGTACTGTTTGTGGTAAAAGAGTTGCTGACGCTACTAGATTACGACAACATATGCGTACTCATACTGGAGAAAGACCGTACGTATGTAAATTATGTGGTCGTGCATTTGCTTTACCTGCTCAACTGACAAGTCATACAAGAGGTCATACTGGTGAACGGCCTTACCGATGTTCAGCTTGTGGTAAATCATTTAAAGAAAGTTCAACGTTACGTGTACACATGCGTATCCATACAGGCGAGAGACCTTACAAGTGTAATTTATGTTCTAAAGCATTTACTCAGTCAAGTGCATTGAGAGCCCATATTAAAGTGCATAAAATGGCCACTggagaaaaaaatatggaagaaAAACATATGGGTCGACACAATGGGGAAAAACCTTTCAAATGTACTGAATGCCCAAAAACATGCTATGAACGCAGTGATCTTGCCAGACATTTAAAAAGCCATTGGTATATTGAACCAATGAAGTGTAAAGAATGTGATAGAACTTTTATGTTGAAAGAACAATTAGAATTACATGTGAGTAGAATGCATATTTCTGGATATTCTTgttTTCGCACAAATTTTGATCTTCAAGAACATATGCCTAAACATACTGGTCAGCAGCGCCCAATGCCCTGTTTATGTACAGGATGTGGTAAAAGATTTCCATACGCATCACGTCTTCGTTATCATATGTGTAAGCACCCAACTGGAGATAAACCATACACATGTAGTGTATGTGGTCGTGCATTTGCATTAGCAACTCAGTTAAATGCTCATATGCGTTATCATACTGGACATATGCCTTATCCTTGCAATATTTGTGAACGTGCATTTCCCACAGCAAGTCGACTTAATTATCATATGCGTGTACATACTGGTGAAAAACCGTTTCGATGTCCAACTTGTGGAAAATCATTCAGATTAAATGGTACTTTATCCACACATATGCGTGTACATACTGGTGAAAGACCGTACAAATGTAATACATGTGAAAAAGCTTTTACACAACCAAATGTGTTAAAAACACATATGAAAGTGCATAGAAAAACACAAATTGATAATGAAGAAAtaacataa
Protein Sequence
MPLEREYFSENPIEMLYDCNLSSIKSRRQRLEDRFTKECTNQSNKEVNHSCRTVLSTLSKLSTTRSMLRSSAAKISKTFSDVKTTLGSFSQKFRRSTKRRKILIEGPVTPICETPRTCIRKTLGRTPTKLYSPFGIESPVKTPSLYRHELTHDANRRTHECSICQQRFAEKGNLKKHIRRHIGDKTHKCSECPKSYYELSALARHVKRHWYIQPVKCKECDQSFMLKEQLEMHSKIHITGKAFSCKQCGKAFVYKYLLRRHEKTHTNDHPYQCTLCEKSFKQSVSLNAHVKKHLGQVKKTVCNVCGISFVNIKMHMMKHTTERPYQCPECGKGLRTTVHLREHMRLHTGEKRIPSALCTVCGKRVADATRLRQHMRTHTGERPYVCKLCGRAFALPAQLTSHTRGHTGERPYRCSACGKSFKESSTLRVHMRIHTGERPYKCNLCSKAFTQSSALRAHIKVHKMATGEKNMEEKHMGRHNGEKPFKCTECPKTCYERSDLARHLKSHWYIEPMKCKECDRTFMLKEQLELHVSRMHISGYSCFRTNFDLQEHMPKHTGQQRPMPCLCTGCGKRFPYASRLRYHMCKHPTGDKPYTCSVCGRAFALATQLNAHMRYHTGHMPYPCNICERAFPTASRLNYHMRVHTGEKPFRCPTCGKSFRLNGTLSTHMRVHTGERPYKCNTCEKAFTQPNVLKTHMKVHRKTQIDNEEIT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-