Basic Information

Gene Symbol
Iswi_1
Assembly
GCA_034766995.1
Location
CM068313.1:3578291-3581771[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.1e-06 0.0044 18.3 0.0 3 41 801 840 800 840 0.96
2 2 0.0047 9.8 7.6 0.0 3 21 903 922 901 927 0.90

Sequence Information

Coding Sequence
ATGTCTAAACCGGAAGAAAATATGGATACCGGTGATAATGGAGAAAATTCGAATGAGTCGACATCAGATACAATGTCTTCGCGCGGTAAAGGCGAGGATTTCGATACAAAAATTGAAACCGATCGCAGTAAACGTTTCGAATATCTTCTAAAACAAACAgaaattttttcacatttcatGACAAATCAACCGTCGAAGAGTTCGCCTAGTTCAAATAAAGCGAAAGCAGGCCGGCCGAAAAAAAAGGTTGATGAACCACCCCCAAAAGCTGATCCTGGAGATCACCGACACCGTAAAACCGAACAAGAAGAGGATGAAGAATTATTGGCGGAAACAAACGCGAAACCAAAAACGACAGTGTGGTTCGAAACATCACCGCCGTACATCAAGAACGGAGAATTGCGAGATTATCAAATTAGAGGCTTGAACTGGATGATTTCGTTATATGAAAACGGAATCAACGGTATCTTGGCAGACGAAATGGGTCTCGGCAAAACCTTACAAACGATCACCCTTCTCGGTTTTATGAAACACTATAAAAGTATACACGGACCACATATAGTTATAGTTCCGAAATCTACATTAGCGAATTGGATGAACGAATTCAAGAAATGGTGTCCGTCCTTACGAGCAGTCTGTTTAATCGGCGATCAAGAGACACGTAGTGCATTTATTAGAGATGTGATGATGCCGGGAGAATGGGATGTTTGCGTGACATCGTATGAAATGTGTATTAAAGAAAAGagtgttttcaaaaaattcaactGGCGTTATATGGTCATCGATGAAGCTCATCGtattaagaatgaaaaatcTAAGTTATCGGAAATTTTAAGAGAATTTAAAACAGCGAATCGTCTTTTACTTACCGGAACTCCTCTACAAAACAATCTCCACGAATTATGGTCGCTTTTGAACTTCTTACTTCCTGACGTTTTCAACTCTTCCGATGATTTCGATGCTTGGTTCAATACAAATCAGTTTCTTGGAGACAATTCACTCGTCGAGCGTCTTCACGCTGTTTTAAGACCGTTCTTACTTCGACGTTTAAAGAGTGAAGTAGAGAAACGTTTGAAACCGAAGAAAGAATTGAAAGTGTACGTGGGGTTGAGTAAAATGCAGAGAGAATGGTACACAAAGGTATTAATGAAAGATATCGATGTGGTTAATGGGGCTGGTAAAATTGAGAAAATGCGATTACAAAATATTCTCATGCAACTACGTAAATGTACCAACCATCCGTATCTTTTTGATGGAGCAGAACCTGGACCTCCTTACACCACAGACGAGCATCTCGTTTACAATTGTGGGAAAATGGTGATTCTAGATAAGTTATTACCTAAATTGAAGGAACAAGGTTCTCGTGTACTTATTTTTAGCCAGATGACACGTATGCTTGATATTTTAGAAGATTACTGCCATTGGCGTCAGTACAAGTACTGTCGTTTAGACGGTCAGACACCTCATGAAGATAGGCAGAGACAAATCAATGAATATAATGAGGACGACagtgaaaaattcatctttATGTTATCGACCCGTGCCGGGGGTCTGGGTATTAATTTAGCGACCGCCGATgttgttataatttatgattccGATTGGAATCCACAGATGGACTTACAAGCTATGGATCGTGCTCATCGTATTGGCCAAAAAAAACAGGTGCGTGTTTTTCGTTTCATTACGGAAAACACCGTCGAAGAAAAAATCGTCGAAAGAGCTGAAGTGAAATTACATTTAGATAAATTAGTTATTCAGCAAGGCCGATTAGTCGATTCTAAAAACCACGCCTTAAATAAAGACGAAATGTTAAATATGATTCGGCACGGAGCTAATCATGTATTTGCTTCGAAAGATTCTGAGATCACAGATGAAGATATCGATACGATATTACAAAAGGGAGAAGCGAAGACTGaagaattgaataaaaagttAGCTCAATTAGGAGAATCTTCCTTACGTAATTTCACTGTCGACACCCCTACCGAATCTGTATATCAGTTTGAGGGTGAAGATTACAGAGAAAAGCAAAAACTCATCGGAATCGGAAACTGGATCGAACCTCCGAAACGTGAACGTAAAGCGAATTACGCCGTCGATGCTTATTTCAGAGAAGCTCTACGCGTGAGTGAGCCGAAAGCACCTAAAGCTCCTAGACCTCCGAAACAACCGATTGTACAGGATTTCCAGTTCTTCCCTCCTCGTCTTTTCGAGTTGCTCGATCAAGAGATTTATTTCTTTCGTAAAACTTTAGGGTACAAAGTTCCTAAAAATCCAGAACTTGGTTCCGAAGCTACAAAAGTACAACGGGAGGAACAGCGAAAAATTGATGATGCAGAGCAGTTATCCGATGAAGAAATATCTGAGAAAGAAGCTCTACTTACACAAGGTTTTACAAACTGGACGAAACGTGATTTCAATCAGTTTATCAaagcaaatgaaaaatatggaCGTGatgatatagaaaatattgcTAAAGAAGTGGAAGGTAAGACTCCAGAGGAAGTGATGGAATATTCAGCAGTATTCTGGGAAAGGTGTCATGAGTTGCAAGACATTGACCGCATAATGGCTCAAATTGAAAGAGGTGAAGCAAAAATTCAAAGAAGGgcAAGTATTAAAAGAGCATTGGATGCTAAAATGGCAAGATATCGAGCTCCATTCCACCAATTACGTATTTCGTATGGAACGAATAAAggaaaaaattatacagaagaAGAAGACAGATTTTTAGTTTGCATGTTACATAAACTTGGCTTTGACcgtgaaaatgtatatgaagagCTTAGAGCTGCGATTCGatcTGCGCCTCAATTTCGTTTCGATTGGTTCTTAAAATCTCGTACAGCGATGGAATTACAGAGACGTTGTAATACGTTAATCACGCTTATCGAAAGAGAGAATCAGGAACTCGAGGAGAAAGAACGTGCAGAGAGGAAAAAGAAACCTCCGAAATCGGCGCCTGGCATACAAGGAGCTGTAGCTACTGGCCAGAAAACAGCACAGAAGAGGAAAAATGATAACGGGTCGGGATCTgaaaagaagaagaagaaaaagtGA
Protein Sequence
MSKPEENMDTGDNGENSNESTSDTMSSRGKGEDFDTKIETDRSKRFEYLLKQTEIFSHFMTNQPSKSSPSSNKAKAGRPKKKVDEPPPKADPGDHRHRKTEQEEDEELLAETNAKPKTTVWFETSPPYIKNGELRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTITLLGFMKHYKSIHGPHIVIVPKSTLANWMNEFKKWCPSLRAVCLIGDQETRSAFIRDVMMPGEWDVCVTSYEMCIKEKSVFKKFNWRYMVIDEAHRIKNEKSKLSEILREFKTANRLLLTGTPLQNNLHELWSLLNFLLPDVFNSSDDFDAWFNTNQFLGDNSLVERLHAVLRPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKVLMKDIDVVNGAGKIEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDEHLVYNCGKMVILDKLLPKLKEQGSRVLIFSQMTRMLDILEDYCHWRQYKYCRLDGQTPHEDRQRQINEYNEDDSEKFIFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRFITENTVEEKIVERAEVKLHLDKLVIQQGRLVDSKNHALNKDEMLNMIRHGANHVFASKDSEITDEDIDTILQKGEAKTEELNKKLAQLGESSLRNFTVDTPTESVYQFEGEDYREKQKLIGIGNWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPIVQDFQFFPPRLFELLDQEIYFFRKTLGYKVPKNPELGSEATKVQREEQRKIDDAEQLSDEEISEKEALLTQGFTNWTKRDFNQFIKANEKYGRDDIENIAKEVEGKTPEEVMEYSAVFWERCHELQDIDRIMAQIERGEAKIQRRASIKRALDAKMARYRAPFHQLRISYGTNKGKNYTEEEDRFLVCMLHKLGFDRENVYEELRAAIRSAPQFRFDWFLKSRTAMELQRRCNTLITLIERENQELEEKERAERKKKPPKSAPGIQGAVATGQKTAQKRKNDNGSGSEKKKKKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01510566;
90% Identity
iTF_01050319;
80% Identity
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