Basic Information

Gene Symbol
dnajc2
Assembly
GCA_034766995.1
Location
CM068321.1:13779984-13781861[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 7.7 1.6e+04 -2.7 1.0 7 17 297 307 296 310 0.71
2 3 0.00054 1.1 10.6 0.0 3 31 432 464 430 470 0.86
3 3 8.9e-15 1.9e-11 45.1 0.3 3 44 564 609 562 611 0.89

Sequence Information

Coding Sequence
ATGGtggaagaaaatttaaacacaTGTAAAACAGTTACTCTTAAACCTGACTTAAGAGTACAAAAAGTAGAATGTGTTGGACCGCAATTTTTACATTACCTCAGTCAAAGTGGTTTAGATGCTGAAggtagaataaatttatttcaaaatgacaaGTGTGATATTACTGATGATATTTATGAAGACGACGTTAATTATCTAAGAAGTTTAGATCCGACGAAATGGAAAGAGCAAGATCATTATGCCGTGTTGGGGTTAAAAAAGATGCGATATAAAGCTACGGATGATGATATTAAGAAAGCTTATCGAAAGAAAGTACTCAAACATCATCCAGATAAACGCAAAGGATTAGGTGAAGAGATCCGTCCTGATGATGATTACTTTACATGCATTACTAAAGCTTATGAGATCTTGGGAACGCCAGCCAAACGTAGGTCATATGATTCTGTTGATCCAGAATTTGATGATTCGTTGCCGTCCGGTGCAGaacttaaaaaagatttttttgaaacattcacaaaatactttaaattaaattcaagatggtcagaaaagaaaaatgttccAAAACTTGGTGATGAAAGTACATCTCGTGATGAAGTCGAgaagttttattcattttggtataattttgattcttggcgtgaattttcatatttagatgaagaagaaaaagaaaaagggCAGGATAGAGAAGAAAGAAGGTggattgaaaaacaaaataaggtAGCAAGGGCAAAAAGAAAGAAGGAAGAAATGTCTCGAATTAGGAATCTAGTTGATTTAGCTTATAATACAGATCCTCGTATAGCGAAATTCAAACTAGAAGACAAAGAAAAGAAGGAGGCTGCAAAACGAGCAAAACAAGATGCTGTACAGGCACGACGCGAAGAAGAAGAAcgcatattaaaagaaatacagGAAGCAAAAGAAAAAGCGGAAGCTGCTGAAAAAGCACTTATTGAAGCAAAGCGACAAGAGAGAGAACTTCAGAAAAAAGCTCttaaaaaagaacgaaaaaCCTTTAGGGACATATGTAAAAGTAACGAGTATTTTGGATCTGATTCTGCGGAAAGTGTGACACATATGACGGCAGTAGATAAAATTTGTGAAGTGTTAAAATTGACCGAGttggaacaaataaataaagaactGATTGAAGAAGGAAAACTTGCCTTTCTTCGAATTGTAAAACAAACTGAGGAAAAATTAGAAGCTGAAAGAAAAGCTATGTTTGAGAAATATGCTTCAAAAACAGATGGAGCTtcagataaaacaaaaaatggcCCTGCAAATTGGAATCCAGACAACATACAACTTTTAATCAAAGCTGTTAATCTTTTTCCAGCTGGTACAAATCAACGATGGGAAGTAGtagcaaattttataaatcaacatGGAAATATGACAAGTGGAAAATATACTGCAAAAGACGTATTGGCAAAAGCAAAAGATTTACAGAAatctgatttttcaaaaaataactttaaaacagATGTTAATAAACAAGCTTACAATCACTTTGAGAAAAATACAAAGAATGCAAGAGTTTTTGATGAAGTAAGCATTTCTAAGAAAGAAGAAACACAGAATGCACTAAACAGTAGTTCACTGACTATTACTACAgaacatttgaaaattaatggtGATTTCAAATCTGCAGTGAATCAAAAGAAATCCGAATGTACTCCTTGGACTCCTGAAGAACAGAAACTCTTAGAACAAGCATTAAAAACATATCCCTCATCGACTGAAGAACGATGGGACAAAATTTCTGAATGTATTCCAAATAGGAGTAAAAAAGAGTGCATGCGTCGATATAAAGAGCTCGTCGATTTAGTTAAAGCAAAAAAAGCAGCTCAAGCCGCAGTTAAATAA
Protein Sequence
MVEENLNTCKTVTLKPDLRVQKVECVGPQFLHYLSQSGLDAEGRINLFQNDKCDITDDIYEDDVNYLRSLDPTKWKEQDHYAVLGLKKMRYKATDDDIKKAYRKKVLKHHPDKRKGLGEEIRPDDDYFTCITKAYEILGTPAKRRSYDSVDPEFDDSLPSGAELKKDFFETFTKYFKLNSRWSEKKNVPKLGDESTSRDEVEKFYSFWYNFDSWREFSYLDEEEKEKGQDREERRWIEKQNKVARAKRKKEEMSRIRNLVDLAYNTDPRIAKFKLEDKEKKEAAKRAKQDAVQARREEEERILKEIQEAKEKAEAAEKALIEAKRQERELQKKALKKERKTFRDICKSNEYFGSDSAESVTHMTAVDKICEVLKLTELEQINKELIEEGKLAFLRIVKQTEEKLEAERKAMFEKYASKTDGASDKTKNGPANWNPDNIQLLIKAVNLFPAGTNQRWEVVANFINQHGNMTSGKYTAKDVLAKAKDLQKSDFSKNNFKTDVNKQAYNHFEKNTKNARVFDEVSISKKEETQNALNSSSLTITTEHLKINGDFKSAVNQKKSECTPWTPEEQKLLEQALKTYPSSTEERWDKISECIPNRSKKECMRRYKELVDLVKAKKAAQAAVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01050310;
90% Identity
iTF_01050310;
80% Identity
-