Aori025535.1
Basic Information
- Insect
- Acanthacorydalis orientalis
- Gene Symbol
- -
- Assembly
- GCA_034766995.1
- Location
- CM068320.1:4572755-4573360[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.9e-10 1.9e-06 28.7 0.0 11 40 23 52 14 54 0.93 2 2 1.6 6.1e+03 -1.8 0.0 1 11 114 124 114 125 0.86
Sequence Information
- Coding Sequence
- aTGGTGCGCAATTACAAACGTAAGAAGGGTCCTATCGACAAGGAGCAACTCAAAATGGACCTTCTTGCTGTTAAAAAAGGCAAAATTAGTGTTCATGAAGCAGCAAGAAGATTCGGAGTAGCCAAGATGACACTGAGCAACTTTTTGAAGAGGAACTGGAATGAAGTCGAACTGGATGATGACTTCACTTTCGAAATGCTGAAGAAAGCTGTGAAAGCAACCATCGTAATAACACCGAAAAAAGAGGATCAAAGAAAAATGCACAAAGTTTGGAATCGTAGCCTTCGACGAGTCGAGTGCGAAAGACAAAACGAAAGAGTCTTGATTAGTCAAATTACGACGAGAACTACGATGACATGTGCTGTGTTTGCTATgaagagatag
- Protein Sequence
- MVRNYKRKKGPIDKEQLKMDLLAVKKGKISVHEAARRFGVAKMTLSNFLKRNWNEVELDDDFTFEMLKKAVKATIVITPKKEDQRKMHKVWNRSLRRVECERQNERVLISQITTRTTMTCAVFAMKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -