Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_034766995.1
Location
CM068322.1:19498961-19519606[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.2e-18 1.6e-14 54.5 0.1 1 45 436 481 436 481 0.96
2 2 1.3e-18 4.9e-15 56.1 0.0 1 43 835 878 835 880 0.95

Sequence Information

Coding Sequence
ATGTATAGATTGGAAAGAGTAGCTGAAGAATTGATGGGCCGAAGGAAATGGAAACTTTATCAAGAATCAATCACAAAGAGCTTATCCGggaacaacaacaacaacaatatcATTCAACAACAATCACAAATCGACTGCAGAAACTTAAACACCGCAACAAGTACGACGATAAACAACAACAAAATCAACAATATAACGACGACGACGATATTATCAACAATAGAAAACAACAACGAAGAGAGATCATCTCCTTCAAGCATATCCGCCACAACAACAACATCAACATCAACAACGTCAACTTCAACAGCAGCCGTACAAGAAGCAGAAGGAGGAACACTTGGCGTCACTGTAGGCTGCAACAAATTAGAAGAGCGATTACGGTTCGGTACGACAACAGGAGGTGGAGGGTCCTCCGATACGACCGCGACGACGGTAACCGTAACGCAACCAGACGGAGAAATCGTCCAAGTACGGGACTGGAGTCCGAACGACAAGTGTTTGTTCTGCACAGACGGCAAACTGGAGTCGCACGATAGTGATACGTTATTACCTGCCTCATCGCTTGGACGCGCTGGATCGACGCTGAGTCCCCATCCGACGGATAGTGACACAAGCGAAAGTCACACCGACTCAGAAACACCTCCCACAAACCCATTACCTACGTTAGCACCAACTCTTTCACCGTCGGCAGTGGCGCAACTCCTTCACCACCACAGCAACAATAATCCAAACGCAGCAGCAAATATGGCGACGATCGAGAGTGTTCATTCGATGGCGGCTTCTTTGGCAGCCGTTGCGGCACTATCGAACAATGCAACGGCTATTGGTCAAAATCATCCAGCTTTACCATTCTATCAGCCTGGCATGTTTTCACAACAATGGTTTCATCTCAGTAATATTACTAGACATTTAGCTAATACACATTCTGACCGAATGGAACTGAATATACCTTCAATAGTACCAACAGTGAATACTTCTGTTAGTACGAATCCAGTTCACTCGTCGTCCAATCCTTCGATAACGACAGAAAAAATGCAATCCTCTTTACATTCATCAGCGTCTACTGAACAACCGCTTGATTTAAGTTCTAAAAGTGGCGGCAGTTCGACATCTTCATTATTAGCGAATTGCACGACCGCTTCAGTTCCTACAGCTACCTCCGCTCTCGAAAATGTACTACAATTGGATCCTATTAAGATGCAACAAAATTTACAAAGAGTACCATCGATGGAcactaaacaaatattcaaTATTGACTTCAGGGCAAAACCAAGGATGACTGCTATGGCTGGGCGTCGTACCTATACAGAAGAAGAATTACAAGCTGCGCTACGTGATATCCAGTCTGGAAAACTAGGTACACGAAGAGCTGCTGTTATTTACGGTATTCCACGTTCAACGCTTCGTAATAAAGTGTATAAACTAGCTATGGAACGAGAACGTGAAAGTCATCTGGTGTTACCGTCCTCGACCCCAACTGTAAAAatagaagaagaagaagatgaTAAAGAGTTATCGGGTGCCGAAGAAGAAAAAGAAGTTGAAAAAGTGTTACAGAAACCACTTCTCTCGATGGATGATATATTACGATTTTCAAATCTTGAACCGAACTCGCTTGACAGTTTAAAACATCTACTTCAAAAAGAAATCAAAGACAAGCACGAATTTTGGGCAAGTCTGGAACATAGTAATGTCGGTCCTGTGATACAATCACTTCTAGCCGCGACTGGTGCACTTTTGCCAGATCAAAAGAACGAAGAAATTAATGCTTTATTGCCTGAACTAGTACGGAGCATGATTGCAGAAGAGCATAATCTGAAAGAATCTTCTATGAAGTTTGATCAAAATGGAACCTCAGAGAAAAATCTGTCAAGACAAAGTTCGGTTAGTTCAGTCATTATCAGAAATGATCGAATCTTTCCGAATAAATCCGGTACTCCAGATGTGGTCGAAACGGAAACGAACGATTCTTTGACTCAACCTCATGCATCAACCGATTCGCCTTCCAATGTGATTCTCAAAATTCCGTCCTTCAAACCGACTACGAGTAAGAATGGAGGTGATTTCTTCAGACAAAATCCCGTTGTATCTGATCAACATCAATCATTACAACAAGTTCCTCTGAATATCAACAGCCCACCTATCGGCAATGTTAATGATTCAAGTTCGCCGCCAATCTTGCCAACAAAAGGACTCATGTCTTTGAGGGACGTTATTGCGCAGAGTATCAGTCAAAAATTCCAACAATCTCCGACACCGAAAGAAGCTTCTGCTGTTGGATTAAAACTACCGTCTCCGTGTATAGACAGTGAGTACAATTCTTTTAAACGCGGACGTTTCACACCGCCGCTGATGGGAGGTGTGTCAGTTATTAAAACTCAACAAGATAACCAACAGAACAGATCATTTTCTCAGCCACAAAAACCTCAAAACAGCAACGTAAACAACACACCAACCGGTGGTAAAGGTACGAGACCGAAAAGAGGAAAATATCGTAATTATGATAGAGACAGTTTAGTTGAAGCAGTTCGAGCCGTTCAACGAGGCGAGATGTCTGTCCATCGCGCAGGAAGTTATTACGGTGTACCACATTCGACGCTCGAGTATAAAGTTAAAGAGCGGCATTTAATGAGACCAAGAAAGAGGGACCCGAAACCAACAACAACTGACGATAAAATTGCGACCGTAGTGAAACCACAAGATCCTATTCGAATCCTTCcggaaaaaaataaaccacCTATATTAAAACCGCCACAAAAGTATCCTCCTACCTCGCCAAACGGCATTAAAATGCCATTATTCGATCCAACTATGGCGCCAATCAGTTACAATCCACCTCCGTTTCCTTTTTGGCCTCATCCATCCTTTCATCATGTGCCGATCGATTTCGCAAGGAACGCTTCAACTTCGAGCTATCCTCCACACCCTGAACAACTTTTTGCTACGCAAATGATGCAAAGATTACAAGAGGAATCTTCTAGAACTCATTCGAACGTTCAGAATACAATATCACCCGCGACGCAGACCAGTGGTGTACCAAATCCGTCTCTAACAAAAACCGCAAGAGAAATGGCCGAATCTTTGTATGACGGTACAGGCGCAAACGGATCATTTCTGGACGGTATAATAAGGTCGAGTCTTGAGATGGGACTGCCTATAGGccataataaaattcaactagaagaaaaaaacatcaCTCCTGAAAACATGTCGAACAAAGCACTCCTCGATCAACTCTGTAGAAACAGCCGTCTGACACCATTACCGAAAACGACTATTTTAGATCCGCAGAGTTCCGGCGATGAGAGTAGCTCGTACCATTCGAAACGGACGCAAAGTCCAATTAACTTTTCAAGGGAGTGTAAAGTCGGTGACAGTCCGTTAGCACTTAATTACGCCGATGGAAAAAGTCCCGCGCGTCCAGAAGAACGGTATTTAAACAAAAGAAACTCCACGGACGTTGTTGAGCTGTCGAATGACTCAAATGACTCGAGCCATCACCAAGTGCAAGATAAAAAACGGAAACTGTCTGTCGACACGCATTCAGAAGAAGAGAGACCGTCAATAACGAGTCCGTCGCCGCCATCAAGAATATACGTGAAGCCACAGTTTCAAGAGATCACGAAACCAGAAAACTTGAAGCCAGAAGCATTGATGCGATTCATTCTACACGATAATTTTAAAGAGGGCAGTGTCGAGCACACGGTCGACAGGAACGGTGTTGGCGAAGAATCGATTGGCGACAATGAAAGTGCCTCTGTTAATCCGGAAGCAGGCCAAGACTGA
Protein Sequence
MYRLERVAEELMGRRKWKLYQESITKSLSGNNNNNNIIQQQSQIDCRNLNTATSTTINNNKINNITTTTILSTIENNNEERSSPSSISATTTTSTSTTSTSTAAVQEAEGGTLGVTVGCNKLEERLRFGTTTGGGGSSDTTATTVTVTQPDGEIVQVRDWSPNDKCLFCTDGKLESHDSDTLLPASSLGRAGSTLSPHPTDSDTSESHTDSETPPTNPLPTLAPTLSPSAVAQLLHHHSNNNPNAAANMATIESVHSMAASLAAVAALSNNATAIGQNHPALPFYQPGMFSQQWFHLSNITRHLANTHSDRMELNIPSIVPTVNTSVSTNPVHSSSNPSITTEKMQSSLHSSASTEQPLDLSSKSGGSSTSSLLANCTTASVPTATSALENVLQLDPIKMQQNLQRVPSMDTKQIFNIDFRAKPRMTAMAGRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERESHLVLPSSTPTVKIEEEEDDKELSGAEEEKEVEKVLQKPLLSMDDILRFSNLEPNSLDSLKHLLQKEIKDKHEFWASLEHSNVGPVIQSLLAATGALLPDQKNEEINALLPELVRSMIAEEHNLKESSMKFDQNGTSEKNLSRQSSVSSVIIRNDRIFPNKSGTPDVVETETNDSLTQPHASTDSPSNVILKIPSFKPTTSKNGGDFFRQNPVVSDQHQSLQQVPLNINSPPIGNVNDSSSPPILPTKGLMSLRDVIAQSISQKFQQSPTPKEASAVGLKLPSPCIDSEYNSFKRGRFTPPLMGGVSVIKTQQDNQQNRSFSQPQKPQNSNVNNTPTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDPKPTTTDDKIATVVKPQDPIRILPEKNKPPILKPPQKYPPTSPNGIKMPLFDPTMAPISYNPPPFPFWPHPSFHHVPIDFARNASTSSYPPHPEQLFATQMMQRLQEESSRTHSNVQNTISPATQTSGVPNPSLTKTAREMAESLYDGTGANGSFLDGIIRSSLEMGLPIGHNKIQLEEKNITPENMSNKALLDQLCRNSRLTPLPKTTILDPQSSGDESSSYHSKRTQSPINFSRECKVGDSPLALNYADGKSPARPEERYLNKRNSTDVVELSNDSNDSSHHQVQDKKRKLSVDTHSEEERPSITSPSPPSRIYVKPQFQEITKPENLKPEALMRFILHDNFKEGSVEHTVDRNGVGEESIGDNESASVNPEAGQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-