Basic Information

Insect: Abscondita terminalis
Gene Symbol: eef1akmt1_1
Assembly: GCA_013368085.1
Location: JABVZW010002556.1:253672-257090[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0016 0.081 13.6 1.0 1 23 112 134 112 134 0.98

2 16 0.006 0.3 11.8 2.5 2 23 137 158 136 158 0.96

3 16 0.0092 0.47 11.2 1.6 2 23 165 186 164 186 0.97

4 16 8.3e-05 0.0042 17.6 1.3 1 23 200 222 200 222 0.98

5 16 0.0036 0.18 12.5 4.0 1 23 228 250 228 250 0.98

6 16 0.0091 0.46 11.2 2.5 1 21 256 276 256 277 0.94

7 16 0.0094 0.48 11.2 4.0 1 23 284 306 284 306 0.97

8 16 0.05 2.5 8.9 2.9 1 23 312 334 312 334 0.96

9 16 0.042 2.1 9.1 3.0 2 23 341 362 340 362 0.96

10 16 0.00036 0.019 15.6 2.2 1 23 368 390 368 390 0.98

11 16 0.003 0.15 12.7 2.9 1 23 396 418 396 418 0.98

12 16 0.00068 0.035 14.8 3.9 1 23 424 446 424 446 0.97

13 16 0.033 1.7 9.5 2.9 1 23 452 474 452 474 0.97

14 16 0.011 0.58 10.9 2.5 1 23 480 502 480 502 0.97

15 16 0.072 3.7 8.4 0.3 2 23 509 530 508 530 0.95

16 16 0.031 1.6 9.5 0.9 2 23 537 558 536 558 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0016	0.081	13.6	1.0	1	23	112	134	112	134	0.98
2	16	0.006	0.3	11.8	2.5	2	23	137	158	136	158	0.96
3	16	0.0092	0.47	11.2	1.6	2	23	165	186	164	186	0.97
4	16	8.3e-05	0.0042	17.6	1.3	1	23	200	222	200	222	0.98
5	16	0.0036	0.18	12.5	4.0	1	23	228	250	228	250	0.98
6	16	0.0091	0.46	11.2	2.5	1	21	256	276	256	277	0.94
7	16	0.0094	0.48	11.2	4.0	1	23	284	306	284	306	0.97
8	16	0.05	2.5	8.9	2.9	1	23	312	334	312	334	0.96
9	16	0.042	2.1	9.1	3.0	2	23	341	362	340	362	0.96
10	16	0.00036	0.019	15.6	2.2	1	23	368	390	368	390	0.98
11	16	0.003	0.15	12.7	2.9	1	23	396	418	396	418	0.98
12	16	0.00068	0.035	14.8	3.9	1	23	424	446	424	446	0.97
13	16	0.033	1.7	9.5	2.9	1	23	452	474	452	474	0.97
14	16	0.011	0.58	10.9	2.5	1	23	480	502	480	502	0.97
15	16	0.072	3.7	8.4	0.3	2	23	509	530	508	530	0.95
16	16	0.031	1.6	9.5	0.9	2	23	537	558	536	558	0.94

Sequence Information

Coding Sequence: ATGTCCGAAATCACAACAACGACATGCAGAATTTGTTTAGGAAAAATTAAGCAAGAACCgcaatttgaattaaacaaagaatCAATACTCAGGTCGAACTCGTTCACGAAAGAAGACATGAGCATCACCGACAACCCAGTCGCATGCGACCAATGTAAATTGGAAATCGACTCAGTCCATCAATCGAGCACTCATCCACCTCTCGTTAAAGAAGAAACCAAACTAGAACTCCTCGATGATGGAATTAAGTCCGAAGGGATCATCACTGACGATCACGTCTTGTTTAACACCGACATTCCTTTGATTATTGAAGAAAGCGTTTCGGTAAACATTTTCTATTGCTTTCAATGCAATTACGGTACTAGCGACAAAGATACATTAATCGATCACATTTTCACCCACCGCTTGAAATGTAATCAGTGTAGCTACACGACTTCTGATAATCACTCGTTAATAATCCACAAAGAAAAACACCTCGTGATTGCACCTTTACAATGCAAAGTTTGTAATTATACTTGCGCAGAAAATCGTTCTTTGGATGAACACATGACTTCGCATATTGGTGGAAGTTATCACCAGGTATCGCCGATCACTTTATTCGAATGCTACAATTGCGGTTACAAAACTAAGGAGAAATCTTATTTGAAGCGGCACATAATTATACATCGCGAAGAAAAACCGTTTAGTTGTAGTTTATGTGATTACCGTTGCAACTTTTTAAGTAGCTTAAAAAATCACGTGATGAAACATTCGGGTAAACAACGTTTTCGTTGCGACAAGTGCTATTACAAAACTTATAGCAATTCTAGTCTGCAGAGGCACAAAATGAACCGCTGcaacgaaaaacaatttaattgtgataaatgcgactacaaaactCATATTAAATCTAATTTGCAGAAGCATAAAATGATTCACTTTAAAGAGAAACGATTTAGTTGTGATAAATGCGACTATAAAACTTATATCAATTCGTATTTGCAGCAACACAAAATGTTTCACTCGAAAGAAAAATGGATCAGTTGCGATAAGTGCGATTATAAAACTTATACGAATTCTAGATTGCACCAGCATAAAATGATTCACGgtaaagaaaaaccgtttactTGTGACAAGTGCGGCTATAAAACTTATAACAATTCTAGATTGCAACAACATCGAATGATTCATTATAAGGAAAAACGGTTTAAGTGTGACAAGTGCGACTATAAAACTTACACCAATTCGAGATTGCGACTGCACAAAATGATTCACTCTAAGGAAATTCGGTTTAATTGCGACAAGTGCGATTATAAAACCTATACCAGATCTTATTTGCAGAAGCACAAAAAGATCCATTCGAAAGTAAAACGGTTTGTGTGCGATGAGTGCGATTATAAAACTTATACGAATTCTAGATTGGATCAGCACAAATGTATTCACTCTAAAGAAACTCGGTTTAATTGTGACGAGTGCCGTTATAAAACTTATACCGATTATATGTTGCAGAGGCACAAAAGGGTTCACTCGAAAGAAAAACAGCTTAGTTGcgataagtgcgactacaaaacgggtgtcaatatttatttacaaaagcaCAAAATAATTCACTCTAAAGGAAAACAGTTGAGTTGTGAcaagtgcgattacaaaacttatATCAATTCATATTTGCAGAAGCACAAAGTTATACATTCtaaagaaaaacagtttagTTGCGATAAGTGCGGATACAAAACTCATATCAACTTGAAGCTTTTTGAGTACGACAAAAGGTTTTTGAAAGTATGCGGAGATGATTTTATTCATTACGATTATAAAGTGCTTTTGGATATTCCTCGGCAATTGGCTAACGACTTCGATTTAGTTATCGCAGATCCGTCGTTTCTTTCCGATGAGTGTTTAACGAAGACTGCTGTAACTATTAGATTTTTGTCTAAGGAAGATATTGTTCTTTGCACCGGTTATATATCAAACCATTGCAtacattatcttttaaataatagtgttttagGTGCTACAATGTCTGATTTAGTCTACCGACTCTTGGGGTTAACGAAGAATGCATTTAAACCTGGTCATCGAAATAATTGA
Protein Sequence: MSEITTTTCRICLGKIKQEPQFELNKESILRSNSFTKEDMSITDNPVACDQCKLEIDSVHQSSTHPPLVKEETKLELLDDGIKSEGIITDDHVLFNTDIPLIIEESVSVNIFYCFQCNYGTSDKDTLIDHIFTHRLKCNQCSYTTSDNHSLIIHKEKHLVIAPLQCKVCNYTCAENRSLDEHMTSHIGGSYHQVSPITLFECYNCGYKTKEKSYLKRHIIIHREEKPFSCSLCDYRCNFLSSLKNHVMKHSGKQRFRCDKCYYKTYSNSSLQRHKMNRCNEKQFNCDKCDYKTHIKSNLQKHKMIHFKEKRFSCDKCDYKTYINSYLQQHKMFHSKEKWISCDKCDYKTYTNSRLHQHKMIHGKEKPFTCDKCGYKTYNNSRLQQHRMIHYKEKRFKCDKCDYKTYTNSRLRLHKMIHSKEIRFNCDKCDYKTYTRSYLQKHKKIHSKVKRFVCDECDYKTYTNSRLDQHKCIHSKETRFNCDECRYKTYTDYMLQRHKRVHSKEKQLSCDKCDYKTGVNIYLQKHKIIHSKGKQLSCDKCDYKTYINSYLQKHKVIHSKEKQFSCDKCGYKTHINLKLFEYDKRFLKVCGDDFIHYDYKVLLDIPRQLANDFDLVIADPSFLSDECLTKTAVTIRFLSKEDIVLCTGYISNHCIHYLLNNSVLGATMSDLVYRLLGLTKNAFKPGHRNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -