Basic Information

Insect: Abscondita terminalis
Gene Symbol: -
Assembly: GCA_013368085.1
Location: JABVZW010002542.1:121532-125557[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 0.35 18 6.2 0.8 1 23 99 121 99 121 0.95

2 29 0.3 15 6.4 3.3 1 23 123 145 123 145 0.98

3 29 1.3 66 4.5 0.5 2 23 156 177 155 177 0.92

4 29 0.00011 0.0056 17.2 4.4 1 23 209 231 209 231 0.98

5 29 0.00012 0.0061 17.1 0.2 1 23 237 259 237 259 0.99

6 29 0.00029 0.015 15.9 4.0 1 23 265 287 265 287 0.98

7 29 0.025 1.3 9.8 9.2 1 23 293 315 293 315 0.98

8 29 2.8e-05 0.0014 19.1 4.4 1 23 321 343 321 343 0.98

9 29 0.0033 0.17 12.6 4.9 1 23 349 371 349 371 0.98

10 29 0.00021 0.011 16.4 4.9 1 23 377 399 377 399 0.98

11 29 0.21 11 6.9 8.7 1 23 405 427 405 427 0.98

12 29 0.00014 0.0071 16.9 2.5 2 23 434 455 433 455 0.97

13 29 0.00017 0.0084 16.7 3.1 1 23 461 483 461 483 0.99

14 29 0.00033 0.017 15.8 5.1 1 23 489 511 489 511 0.98

15 29 0.03 1.5 9.6 8.0 1 23 517 539 517 539 0.98

16 29 0.00021 0.011 16.4 4.9 1 23 545 567 545 567 0.98

17 29 0.00021 0.011 16.3 4.7 1 23 573 595 573 595 0.99

18 29 0.0026 0.13 12.9 5.0 1 23 601 623 601 623 0.98

19 29 2.9 1.5e+02 3.3 0.6 2 12 697 707 696 710 0.86

20 29 0.00061 0.031 14.9 2.4 1 23 788 810 788 810 0.98

21 29 0.42 21 6.0 1.5 1 23 812 834 812 834 0.95

22 29 0.0044 0.23 12.2 5.1 1 23 887 909 887 909 0.98

23 29 0.091 4.6 8.1 3.9 1 23 930 952 930 952 0.95

24 29 1.6 80 4.2 1.8 1 23 958 980 958 980 0.95

25 29 0.011 0.55 11.0 4.2 1 23 986 1008 986 1008 0.96

26 29 7 3.6e+02 2.1 6.5 1 23 1014 1036 1014 1036 0.98

27 29 0.011 0.55 11.0 4.2 1 23 1042 1064 1042 1064 0.96

28 29 7 3.6e+02 2.1 6.5 1 23 1070 1092 1070 1092 0.98

29 29 0.41 21 6.0 4.4 1 23 1098 1120 1098 1120 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	0.35	18	6.2	0.8	1	23	99	121	99	121	0.95
2	29	0.3	15	6.4	3.3	1	23	123	145	123	145	0.98
3	29	1.3	66	4.5	0.5	2	23	156	177	155	177	0.92
4	29	0.00011	0.0056	17.2	4.4	1	23	209	231	209	231	0.98
5	29	0.00012	0.0061	17.1	0.2	1	23	237	259	237	259	0.99
6	29	0.00029	0.015	15.9	4.0	1	23	265	287	265	287	0.98
7	29	0.025	1.3	9.8	9.2	1	23	293	315	293	315	0.98
8	29	2.8e-05	0.0014	19.1	4.4	1	23	321	343	321	343	0.98
9	29	0.0033	0.17	12.6	4.9	1	23	349	371	349	371	0.98
10	29	0.00021	0.011	16.4	4.9	1	23	377	399	377	399	0.98
11	29	0.21	11	6.9	8.7	1	23	405	427	405	427	0.98
12	29	0.00014	0.0071	16.9	2.5	2	23	434	455	433	455	0.97
13	29	0.00017	0.0084	16.7	3.1	1	23	461	483	461	483	0.99
14	29	0.00033	0.017	15.8	5.1	1	23	489	511	489	511	0.98
15	29	0.03	1.5	9.6	8.0	1	23	517	539	517	539	0.98
16	29	0.00021	0.011	16.4	4.9	1	23	545	567	545	567	0.98
17	29	0.00021	0.011	16.3	4.7	1	23	573	595	573	595	0.99
18	29	0.0026	0.13	12.9	5.0	1	23	601	623	601	623	0.98
19	29	2.9	1.5e+02	3.3	0.6	2	12	697	707	696	710	0.86
20	29	0.00061	0.031	14.9	2.4	1	23	788	810	788	810	0.98
21	29	0.42	21	6.0	1.5	1	23	812	834	812	834	0.95
22	29	0.0044	0.23	12.2	5.1	1	23	887	909	887	909	0.98
23	29	0.091	4.6	8.1	3.9	1	23	930	952	930	952	0.95
24	29	1.6	80	4.2	1.8	1	23	958	980	958	980	0.95
25	29	0.011	0.55	11.0	4.2	1	23	986	1008	986	1008	0.96
26	29	7	3.6e+02	2.1	6.5	1	23	1014	1036	1014	1036	0.98
27	29	0.011	0.55	11.0	4.2	1	23	1042	1064	1042	1064	0.96
28	29	7	3.6e+02	2.1	6.5	1	23	1070	1092	1070	1092	0.98
29	29	0.41	21	6.0	4.4	1	23	1098	1120	1098	1120	0.96

Sequence Information

Coding Sequence: ATGGCAGAAACTATAACGCAATGCAGAATTTGTTCGAACGAATTAAAAGATGAATCTGTATTTCATTCGACATGTAACTTAATGCCTATAAAAACCGAATTCACAATTAACGAGAACCCAGTTGCGTGTAACGAATGTAAGATCGAAAACGATGAAGAATACCAAGTCTCAAGTCCGCTTCCGAGCTTTGCTGATGAAGGAAATTATTCAGAAGAAATCGTTAAAGATGAGTATCTGTTATTAAACACGGATATACCGATCTGCATCGAAGAATCTACATTAACGAACATTTTTTACTACTGCTACCTTTGTAATTATTCCACGAATGATAAAATTGTTCTAACCGATCATGTATATAATCACCGTTTCAAATGCAATCTGTGTAGCTACTGTACTTTCGATAACACCGCATTGGATATGCATAAAGAGACgcactttaatataaattcaggtAAGAATTTACTTCAATGTTACAATTGCGATTATCAgactgaaaataaaacaaatttagcgTTTCATGTGGTAACGCATAAAAgattgtttgaagaaaaatctaaaagCTGCTACACAAATGTTCGGATTCGGAATCGACGTAAAAAAACATCGCActcccaaaaaaaaacgtttaaatgtaaattgtgtgaTTATTCCTGTATACGAAAAGGAAACTTAACTTTACACATGTTTAAACACTCGGGTGAGTGGCCTTACGTGTGTAACGAGTGCGGCTACAAGAGCGGGGGCAAAACTCAATTAATTCAACACATCAGAACGCACACTAAGGAGAAACCATTTAAATGTAAGTTGTGCGATTATTCCTGTACACAAAAAGGTGGCTTAACTTTGCACATGTTTAAACATTCGGGTGAGTGGCGGTACAAGTGTAAAAAGTGCGACTACAAGTGCACACGTAAAACTCTATTAATTCAACACTGCAGAACACACACTCAagagaaaccgtttaaatgtaaattgtgtgaTTATTCCTGTTCACAAAAAGGAAACTTAACAGTGCACATGTTTAAACACTCGGGTAAGTGGCCCCACAGGTGTAACGAGTGCGACTACAGGTGCGGAAGCAAAAATAGACTAATTCAACACATCAGAACGCACACTAAggaaaaaccttttaaatgtaaattgtgcgATTATTCCTGTACACAAAAAGGTAGCTTAACTTTGCACATGTTTAAACATTCGGGTGAGTGGCCGTACAAGTGTAAAAAGTGCGACTACAAGTGCGCACGTAAAACTCGATTAATTCAACACTGCAGAACACACACTCAAGAGGAACTGTTGAAATGTAAATTGTGTGATTATTCGTGTTCACAAGAAGGAAACTTGACAGTGCACATGTTTAAACACTCGGGTAAGTGGCCCTACAGGTGTAGCGAGTGCGACTACAGGTGCGGaagcaaaaataaactaattcaaCACATCAGAACGCACACTAAGGAGAAACCATTTAAATGTAAGTTGTGCGATTATTCCTGTACACAAAAAGGTACCTTAACTTTGCACATGTTTAAACATTCGGGTGAGTGGCGGTACAAGTGTAAAAAGTGCGACTACAAGTGCGCACGTAAAACTCTATTAATTCAACACTGCAGAACACACACTCAagagaaaccgtttaaatgtaaattgtgtgaTTATTCCTGTACACAAAAAGGTAGCTTAACTTTGCACATGTTTAAACATTCGGGTGAGTGGCCTTACAGGTGCAATAAGTGCGACTACAAGTGCGCACGTAAAACTCGATTAATTCAACACATCAGAACGCACACTAAggaaaaaccttttaaatgtaaattgtgcgATTATTCGTGTAGGATAAAATCGTTGTTAACTATGCACATGTTTAAACATTCGGGCTGTTCGACAGTAGTGTTCGACTCAATacctattaataataatattttaatacgcaacttactattatttttaccCTTCGAACAACAACACAAAGCGATTAGAGAAAATGTCTACTCGAAAAAATCATGGCAAAATACAGTTTCTGGGCGTTATCCAAAAGATGGTTATGATGTTGTAACTTGTGAAAGAGGCATGGATGAAAGTGCAAAAATAACTTGCAAGGTTTGCGAGAAAGAattcgaacgattttattcaccAAACAACGATTCGGCGTTGTTCAATGTGAAAGCAGAGTTGGGTATCGAAGAACGTCAACTTGTATGCGACAATTGCGAAATTAAAACGAACGAAGCGTACCAGTTGTGCATACAAAATGAAAACGTTCCGCAATTGCTGTCCGGTTTCATTAAGAAGGAAGAGATTATTGAAGACGATTGTATTATCTTCAACACCGATATGCCTATATGTATTGAGGCGTCTTCTTTTTATTACTGCCATCGATGCGATTACAGCACATACGACAAAAGCGATTTAAGGGACCACGTTATTAGTCACTCTTTTAAATGCGAAGAGTGTAGCTATACAACTTATGACGATCGTTCAATGACGACTCATAAAGAATTGCACTCGAATGTGAAACGTTTGTATTGtaaggtttttaattttcttaagtcCGATACAGTGAATTACAATTATTTGCCGCATAAAAGCGACATTGAATGTCGTGATTGCGGTTATCAGACTTGCGAATGTAATGCGATTTCTCATCGAAAATTTACGGTTTACAAATGTAACCGATGTCAATTTTCAACTACGACAAGAAGTCACTTAAAACTGCATTCTAACATTCATATGttaaaaatcacattaaaaagacgacgtacattaaaaaacaatattgtaaaaaaacgctATCAATGCAACTTGTGTGATTACAGCTGTAATGTTTCGAATCTTTTAAGATACCACTCTTATAAGCATTCTGGTAATTGGCCGTTTAGTTGTGACAAGTGCGACTTCAAAACTATTACCAGAACTAGAATTAAGTGGCACAAAACGATTCACTCTGATGAAAAACCGTTCGAATGCAAATTGTGCGATTACAGATGTAAAGATTCGCGAGACTTAAAAATTCATTCTTATAAACATTCAGGCGATTGGCCGTATAGGTGCGACAAATGCGATTTCAAAACTCATTCGAAATGTAAGTTTATCGGTCACGAAAGGATTCACACCGAAGAAAAACCGTTCGAATGCAAATTGTGCGATTACAGATGTAAAGATTCGCGAGACTTAAAAATTCATTCTTATAAACATTCAGGCGATTGGCCGTATAGGTGCGACAAATGCGATTTCAAAACTCATTCGAAATGTAAGTTTATCGGTCACGAAAGGATTCACACCGAAGAAAAACCGTTCAAGTGCAACTTGTGCGATTATCGTTCGAACTTTGCGTGCAGCTTAAAAGCTCACTCTTATAAACATTCAGGCGATTGGCCTTTcagctgcgacaagtgcgactacaaaactCATTGCCGATATAAGTTGAGACGccacaaaaatacaattttccatCAAGAAGTGACCGGTTaa
Protein Sequence: MAETITQCRICSNELKDESVFHSTCNLMPIKTEFTINENPVACNECKIENDEEYQVSSPLPSFADEGNYSEEIVKDEYLLLNTDIPICIEESTLTNIFYYCYLCNYSTNDKIVLTDHVYNHRFKCNLCSYCTFDNTALDMHKETHFNINSGKNLLQCYNCDYQTENKTNLAFHVVTHKRLFEEKSKSCYTNVRIRNRRKKTSHSQKKTFKCKLCDYSCIRKGNLTLHMFKHSGEWPYVCNECGYKSGGKTQLIQHIRTHTKEKPFKCKLCDYSCTQKGGLTLHMFKHSGEWRYKCKKCDYKCTRKTLLIQHCRTHTQEKPFKCKLCDYSCSQKGNLTVHMFKHSGKWPHRCNECDYRCGSKNRLIQHIRTHTKEKPFKCKLCDYSCTQKGSLTLHMFKHSGEWPYKCKKCDYKCARKTRLIQHCRTHTQEELLKCKLCDYSCSQEGNLTVHMFKHSGKWPYRCSECDYRCGSKNKLIQHIRTHTKEKPFKCKLCDYSCTQKGTLTLHMFKHSGEWRYKCKKCDYKCARKTLLIQHCRTHTQEKPFKCKLCDYSCTQKGSLTLHMFKHSGEWPYRCNKCDYKCARKTRLIQHIRTHTKEKPFKCKLCDYSCRIKSLLTMHMFKHSGCSTVVFDSIPINNNILIRNLLLFLPFEQQHKAIRENVYSKKSWQNTVSGRYPKDGYDVVTCERGMDESAKITCKVCEKEFERFYSPNNDSALFNVKAELGIEERQLVCDNCEIKTNEAYQLCIQNENVPQLLSGFIKKEEIIEDDCIIFNTDMPICIEASSFYYCHRCDYSTYDKSDLRDHVISHSFKCEECSYTTYDDRSMTTHKELHSNVKRLYCKVFNFLKSDTVNYNYLPHKSDIECRDCGYQTCECNAISHRKFTVYKCNRCQFSTTTRSHLKLHSNIHMLKITLKRRRTLKNNIVKKRYQCNLCDYSCNVSNLLRYHSYKHSGNWPFSCDKCDFKTITRTRIKWHKTIHSDEKPFECKLCDYRCKDSRDLKIHSYKHSGDWPYRCDKCDFKTHSKCKFIGHERIHTEEKPFECKLCDYRCKDSRDLKIHSYKHSGDWPYRCDKCDFKTHSKCKFIGHERIHTEEKPFKCNLCDYRSNFACSLKAHSYKHSGDWPFSCDKCDYKTHCRYKLRRHKNTIFHQEVTG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -