Basic Information

Insect: Abscondita terminalis
Gene Symbol: -
Assembly: GCA_013368085.1
Location: JABVZW010002424.1:252522-268450[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 31 0.3 15 6.5 2.5 1 23 106 128 106 128 0.97

2 31 2 1e+02 3.8 3.0 1 23 130 152 130 152 0.91

3 31 8.7 4.4e+02 1.8 0.8 2 23 159 181 158 181 0.91

4 31 0.86 44 5.0 4.1 2 23 199 220 198 220 0.93

5 31 0.29 15 6.5 0.4 1 23 263 285 263 285 0.98

6 31 0.016 0.82 10.4 3.4 1 23 291 313 291 313 0.98

7 31 0.038 1.9 9.3 3.2 1 23 319 341 319 341 0.97

8 31 0.0014 0.07 13.8 2.5 1 23 347 369 347 369 0.98

9 31 0.0043 0.22 12.2 4.1 1 23 375 397 375 397 0.99

10 31 0.0026 0.13 12.9 2.8 1 23 403 425 403 425 0.98

11 31 0.0068 0.34 11.6 4.3 2 23 432 453 431 453 0.97

12 31 0.00097 0.049 14.3 4.3 1 23 459 481 459 481 0.98

13 31 0.0059 0.3 11.8 1.5 2 23 488 509 487 509 0.93

14 31 4.8e-05 0.0025 18.4 1.4 1 23 515 537 515 537 0.98

15 31 0.012 0.63 10.8 1.4 1 23 543 565 543 565 0.99

16 31 1.6 84 4.1 0.7 5 23 630 648 629 648 0.93

17 31 0.021 1 10.1 6.1 1 23 654 676 654 676 0.98

18 31 0.0021 0.11 13.2 3.3 1 23 682 704 682 704 0.97

19 31 0.02 1 10.1 6.5 1 23 710 732 710 732 0.98

20 31 0.00028 0.014 16.0 2.1 1 23 738 760 738 760 0.97

21 31 0.22 11 6.9 6.0 1 23 766 788 766 788 0.96

22 31 0.0042 0.21 12.3 1.3 1 23 794 816 794 816 0.97

23 31 0.00046 0.024 15.3 4.1 1 23 822 844 822 844 0.98

24 31 0.00064 0.033 14.8 4.6 1 23 850 872 850 872 0.98

25 31 0.0026 0.13 12.9 7.7 1 23 878 900 878 900 0.99

26 31 0.01 0.53 11.0 3.7 1 23 906 928 906 928 0.97

27 31 0.022 1.1 10.0 7.3 1 23 934 956 934 956 0.98

28 31 0.00013 0.0067 17.0 1.5 1 23 962 984 962 984 0.97

29 31 0.0074 0.38 11.5 6.1 1 23 990 1012 990 1012 0.98

30 31 0.021 1.1 10.1 1.0 1 23 1018 1040 1018 1040 0.97

31 31 0.039 2 9.2 8.8 1 23 1046 1068 1046 1068 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	31	0.3	15	6.5	2.5	1	23	106	128	106	128	0.97
2	31	2	1e+02	3.8	3.0	1	23	130	152	130	152	0.91
3	31	8.7	4.4e+02	1.8	0.8	2	23	159	181	158	181	0.91
4	31	0.86	44	5.0	4.1	2	23	199	220	198	220	0.93
5	31	0.29	15	6.5	0.4	1	23	263	285	263	285	0.98
6	31	0.016	0.82	10.4	3.4	1	23	291	313	291	313	0.98
7	31	0.038	1.9	9.3	3.2	1	23	319	341	319	341	0.97
8	31	0.0014	0.07	13.8	2.5	1	23	347	369	347	369	0.98
9	31	0.0043	0.22	12.2	4.1	1	23	375	397	375	397	0.99
10	31	0.0026	0.13	12.9	2.8	1	23	403	425	403	425	0.98
11	31	0.0068	0.34	11.6	4.3	2	23	432	453	431	453	0.97
12	31	0.00097	0.049	14.3	4.3	1	23	459	481	459	481	0.98
13	31	0.0059	0.3	11.8	1.5	2	23	488	509	487	509	0.93
14	31	4.8e-05	0.0025	18.4	1.4	1	23	515	537	515	537	0.98
15	31	0.012	0.63	10.8	1.4	1	23	543	565	543	565	0.99
16	31	1.6	84	4.1	0.7	5	23	630	648	629	648	0.93
17	31	0.021	1	10.1	6.1	1	23	654	676	654	676	0.98
18	31	0.0021	0.11	13.2	3.3	1	23	682	704	682	704	0.97
19	31	0.02	1	10.1	6.5	1	23	710	732	710	732	0.98
20	31	0.00028	0.014	16.0	2.1	1	23	738	760	738	760	0.97
21	31	0.22	11	6.9	6.0	1	23	766	788	766	788	0.96
22	31	0.0042	0.21	12.3	1.3	1	23	794	816	794	816	0.97
23	31	0.00046	0.024	15.3	4.1	1	23	822	844	822	844	0.98
24	31	0.00064	0.033	14.8	4.6	1	23	850	872	850	872	0.98
25	31	0.0026	0.13	12.9	7.7	1	23	878	900	878	900	0.99
26	31	0.01	0.53	11.0	3.7	1	23	906	928	906	928	0.97
27	31	0.022	1.1	10.0	7.3	1	23	934	956	934	956	0.98
28	31	0.00013	0.0067	17.0	1.5	1	23	962	984	962	984	0.97
29	31	0.0074	0.38	11.5	6.1	1	23	990	1012	990	1012	0.98
30	31	0.021	1.1	10.1	1.0	1	23	1018	1040	1018	1040	0.97
31	31	0.039	2	9.2	8.8	1	23	1046	1068	1046	1068	0.99

Sequence Information

Coding Sequence: ATGTCCAACAACGCAATAAAATGCAGATCGGACAACTCAATGCTCGACTCAACAAAGTCGAATTCTTTGGAACTTGTTGTAAGTAAACACACACAATCGGAACATCTTAACAACTCAACTTTGTTAAAGAACAATCGAAGCGCATTGCCGAACGCCCCCATTAAAGCAGAGATAATCGCAAAGGAGGAGATCGACGTCGTACAACAAGATCCACTAATAACCGACGCAGTTCACGATGAAATTTTTGTAGAGAAAATTAAAGAGGAGTTCGTCGATGGCCCActtaaaattgaagaagtttATGTGTGCAACATGTATTACTGCTACCATTGCAGTTACAATAGCAacgagaagaaaaatttaatcggCCACATTTTCATTCACCGCTTTAGGTGTATTCAATGCGCTTTTACGACTTTTAACAGCTCCTCGTTTACAACTCACAGAAACACGCATTTAAACACCGGTTCTTTACAGTGCGGCTTTTGCGATTTTACTTGCGCCGAAGTTAATTTTCTCGATGAACATATGTACGTACGACATCCTGGCGAAAAATCTTATGCGGCCACAACGGAGCAGCCGACGCATTTAACAGAATGTCATGACTGCGGTTATCGGACTTACAGTAAACCTACTTTGAAATGTCACCTAGTAAGGCATAAAAAAATCGCCCCGTTTTTTTGCAATGTGTGCAATTTTAATACtcactctaaaaataatttaaaatttcattcgtTAAAGCACAAACGCGCTGTAAGTCGTCACATTTCTACACCGAACGCGAAGCATAAGTGTGAATTATGCAACTTTGAGACTGTTGATGAAGATATTTTGGTAAATCATGTGCGCACACATACtgaagaaaaaccatttaaatgcaaCTTGTGCGAGTATAGTGGTAGACGATTAGGTTGTTTGAAATTACATATGTATAAACATACTCGTGAAACTCCTTTCAGTTGCGATAAATGTGATTACAAAACTCAGTCCGAAACTCATTTGGCGAAGCACAAAGTAACTCACTCTAATGAAAAACCTTTCGAATGCAATTTATGTGAATATCGTTCTAAacgacaaaattatttaaaaatacatatgtaTAAACACTATGGCGAATGGCCTTTTCAGTGCGACGTGTGTGACTATAAAACTCACAAGAACAGCAAGTTGATGATTCATAAAAGAACACATACTGGTGAAAAGCCTTTTAAATGCCAATTGTGCGATTATAGTGGTAAACAATTGGTCCATTTAAATATGCACATGTATAAACATTCTGGTGATTGGCCTTTGAAGTGTGATAAGTGCGATTACAAGACTCACAACAAAAGCAAACTTGTCATACACAAACGAACTCACACCGGTGAGaaaccatttaaatgtaatttatgcgATTATAGTAGTAAGCAATTGACCCACTTAAATTTGCACATGTATAAGCACGCTAGCGAATGGCCTTTGAAATGCGACGAATGCGACTACAAGACTTACGACAACAGCAAACTTAAGAATCACAAAGTGAATCACACCAGTGATAAACCTTTTAAATGCGAATTGTGCGGTTATAGTGCTAGGCGATTGAGCAGTTTAAAATCGCATATGTATAAACACTCAGGGAAGTGGCCTTATGAATGCGACCAATGCAGTTATAAAACTAACGAAAAAAACAAGATGACTAATCACATTAGGGTGCACACCGGAGAAAAACCGTTCCAATGCAAATTTAAAAAGCACTTGAATGGACAAGTTACCAATGTCTCATCGAAGAATATCGAAATTAAATGTGAAGATGAAGAACATTCAATCCATGAAGACCTTGCATTTAAATGCAGTGAAAGTAGGGACCATTCGATTGAACATCCAGTCGTTCAATCTTTCAGTTCTGACAAGTGCGTGtataaaactaatagaaaatcTGATTTCCAACAGCACAAAACCATTCACGTTGAAGAAAAACGATTTAAGTGTAGTTTGTGCGATTACGGTTCTAATTTTTCACATCATTTAAAAACGCACTTGATGAAACATTCTGGCGAACAACCTTTCAGTTGTGACAAGTgcgattttaaaactaatacaaaatattatttatcacgGCATCAAACTATCCACTCCGAGGAGAAACGatttaaatgtagtttgtgCGAATACAGGTGCAATTTCTCACATAGTTTAAAAGCGCACTTGATGAAACATTCAGGCGATCTACCTTTTAGTTGTGAaaagtgcgactacaaaactaCTACAAACgttaatttgcaaaaacacaaaactattCACTCTGaagaaaaacgatttaaatgtagtttatgCGAATACAGTTGTAATTTTTCGCATAGTTTCAAAGCGCACTTGGTGCAACATTCGGGTGAACAACATTTCAGTTGTGACAAGTGCGCTTATAAAACTAGTAGAAAATCTTATTTGATACAGCACAAAGCTATTCACTTTGAAGAAAAACGGTTTAAATGTAGTTTGTGCGATTACAGTTGCAacttttcatataatttaaaagtgcaCTTGATGAACCATTCGGGTGAACGACCTTTCAGTTGCGACAAATGCTCGTACACAACTAGTAGAAAATATAGTTTGCAAAAGCACAAAACTACTCACTTTGAAGAAAAACGATTTAAGTGTAATTTGTGCGATTACAGTACCAAGTTTTCACATCATTTAAAAACGCACTTGATGAAACATTCTGGTGGAGAAACTTTCAGTTGCGACAAGTgcgattttaaaactaatacgAAATATTATCTGTCACGACATAAAACTATCCACTCTGaagaaaaacgatttaaatgcaGTTTGTGCGAATACAGTTGTAATTTTTCGCATAGTTTAAAAACGCACTTGATGAAACATTCAGGCGAACAACCTTTCAGTTGTGAtaagtgcgattacaaaactaCTACAAAAGGTAATTTGCAAACTCACAAAATTGTCCATTTGGAggaaaaacgatttaaatgtagtttgtgCGAATACAGTTGCAATTTTTCACATAGTTTAAAAGCGCATTTGATGAAACATTCGGGTGAAGTAGGTTTCAGTTGTGACAAGTGCGCTTACAAAACTGGTAGAAAAAGTGCTTTGCTTAGGCACAAAACTAttcatttcaaagaaaatccatttaaatgtagtttttgcaATTACAGTTGtaactttttacataatttaaagttgCACTTGAAGAAGCATTCAAGCTAA
Protein Sequence: MSNNAIKCRSDNSMLDSTKSNSLELVVSKHTQSEHLNNSTLLKNNRSALPNAPIKAEIIAKEEIDVVQQDPLITDAVHDEIFVEKIKEEFVDGPLKIEEVYVCNMYYCYHCSYNSNEKKNLIGHIFIHRFRCIQCAFTTFNSSSFTTHRNTHLNTGSLQCGFCDFTCAEVNFLDEHMYVRHPGEKSYAATTEQPTHLTECHDCGYRTYSKPTLKCHLVRHKKIAPFFCNVCNFNTHSKNNLKFHSLKHKRAVSRHISTPNAKHKCELCNFETVDEDILVNHVRTHTEEKPFKCNLCEYSGRRLGCLKLHMYKHTRETPFSCDKCDYKTQSETHLAKHKVTHSNEKPFECNLCEYRSKRQNYLKIHMYKHYGEWPFQCDVCDYKTHKNSKLMIHKRTHTGEKPFKCQLCDYSGKQLVHLNMHMYKHSGDWPLKCDKCDYKTHNKSKLVIHKRTHTGEKPFKCNLCDYSSKQLTHLNLHMYKHASEWPLKCDECDYKTYDNSKLKNHKVNHTSDKPFKCELCGYSARRLSSLKSHMYKHSGKWPYECDQCSYKTNEKNKMTNHIRVHTGEKPFQCKFKKHLNGQVTNVSSKNIEIKCEDEEHSIHEDLAFKCSESRDHSIEHPVVQSFSSDKCVYKTNRKSDFQQHKTIHVEEKRFKCSLCDYGSNFSHHLKTHLMKHSGEQPFSCDKCDFKTNTKYYLSRHQTIHSEEKRFKCSLCEYRCNFSHSLKAHLMKHSGDLPFSCEKCDYKTTTNVNLQKHKTIHSEEKRFKCSLCEYSCNFSHSFKAHLVQHSGEQHFSCDKCAYKTSRKSYLIQHKAIHFEEKRFKCSLCDYSCNFSYNLKVHLMNHSGERPFSCDKCSYTTSRKYSLQKHKTTHFEEKRFKCNLCDYSTKFSHHLKTHLMKHSGGETFSCDKCDFKTNTKYYLSRHKTIHSEEKRFKCSLCEYSCNFSHSLKTHLMKHSGEQPFSCDKCDYKTTTKGNLQTHKIVHLEEKRFKCSLCEYSCNFSHSLKAHLMKHSGEVGFSCDKCAYKTGRKSALLRHKTIHFKENPFKCSFCNYSCNFLHNLKLHLKKHSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -