Basic Information

Insect: Abscondita terminalis
Gene Symbol: -
Assembly: GCA_013368085.1
Location: JABVZW010001804.1:132755-145263[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.011 0.56 11.0 1.2 2 20 159 177 159 180 0.92

2 11 4.5e-05 0.0023 18.5 3.1 1 23 186 208 186 208 0.99

3 11 9.2e-06 0.00047 20.6 2.7 1 23 214 236 214 236 0.98

4 11 8.3e-06 0.00042 20.8 0.6 3 23 245 265 244 265 0.99

5 11 1.8e-05 0.00094 19.7 0.4 1 23 271 293 271 293 0.99

6 11 9.6e-07 4.9e-05 23.7 2.4 1 23 299 321 299 321 0.97

7 11 3.6e-05 0.0018 18.8 4.2 2 23 327 348 326 348 0.97

8 11 1.5e-06 7.7e-05 23.1 2.7 1 23 354 376 354 376 0.99

9 11 2.9e-06 0.00015 22.2 3.2 1 23 382 404 382 404 0.98

10 11 0.0012 0.062 14.0 7.1 1 23 410 432 410 432 0.98

11 11 0.0046 0.24 12.1 1.8 1 20 443 462 443 464 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.011	0.56	11.0	1.2	2	20	159	177	159	180	0.92
2	11	4.5e-05	0.0023	18.5	3.1	1	23	186	208	186	208	0.99
3	11	9.2e-06	0.00047	20.6	2.7	1	23	214	236	214	236	0.98
4	11	8.3e-06	0.00042	20.8	0.6	3	23	245	265	244	265	0.99
5	11	1.8e-05	0.00094	19.7	0.4	1	23	271	293	271	293	0.99
6	11	9.6e-07	4.9e-05	23.7	2.4	1	23	299	321	299	321	0.97
7	11	3.6e-05	0.0018	18.8	4.2	2	23	327	348	326	348	0.97
8	11	1.5e-06	7.7e-05	23.1	2.7	1	23	354	376	354	376	0.99
9	11	2.9e-06	0.00015	22.2	3.2	1	23	382	404	382	404	0.98
10	11	0.0012	0.062	14.0	7.1	1	23	410	432	410	432	0.98
11	11	0.0046	0.24	12.1	1.8	1	20	443	462	443	464	0.91

Sequence Information

Coding Sequence: atgaaatttgataatatttgtaCGGCTTGTCTCCGCGCAGACGAGGCTTTAATTAATATGCACCAAGACAACATCATCGAGAAATTCTTATCATGCACAGGCCTAACCGCACAGAATGATTACTTCAATTTATGCCGTTCTTGCGAAGAAACATTGAACCTCGCTTACGATTtcaaagtaaaatgtttaaactcgCATCAGGTTTTATTAAGCTACGCCGAGGAGGAAGACGTCGTCGTAAAAAACGAACATGTTTCTTCTACAGAGGTGTCgcaagttattgaaaatttgaaacagaACTTTTACGTCAACACTAATTGCATTCAATGCGGTTTCGTTGCTAGCAATTCGCTGGCCTTATCGATTCACGTATCTCTAGTGCATAAAGATTTAAAGGGACGTTGGTGTCGCGCTTGCAATGTAGAATGCGATGACTTACCGAATCATTTGGAGACGCATCATGGCGATGAAGCGACCTGTAActtctgtaataaaaaatttcgtagTAAGGCACGCTTAGCCGAACATTTGCCCAGTCATTCTGatCAACGAAATTTTCAATGCCCTTTTTgtagtaaaacttttattttacaaaggCATTTGAACGTGCACGTTCGAAAACACAATGAGGATAAGTCGTACAAGTGTCACGTGTGCGATATGTCGTTTGTTCAGCTTCGTCAATTGAAGAAGCATTTGAAAGGGCACGAAGTGAGCGGGAAGAAGACACTGTGCAATGTGTGCGGGAAGGAATTCAAGACGGTGACTAAGTTGAAGGTGCACATGCGAGTGCACACCGGAGAAACGCCTTATAAATGTTCGTATTGCCCGAAGAGTGTGGCCACTCGTAATCAATTGGTGGTACACGAACGTACACACACGGGGGAAAAACCTCACGTGTGCCACGTTTGCGGCAAGAGTTTTGCCCAATCGAGCGTTTTAACGACCCACATGCGTTTACACACGGGGCCTACAATAACCTGTAAGATttgcaatcaaaaattttgtagggAGTCGCAGTTGCGTTTGCATTTGAGAAGACACACCGGGGAGAAACCGTATCGGTGCACCGAGTGTGGCAAATCGTTTATACAACGCAGTCATCTCGTCGAACATAATAAGACGCACAGCGATTTACGTCCGCATCAATGCAGTTATTGCGACAAAGCGTTTAAGAAAAGTTCCTCGTTGAAACAGCACGTGCAGATACATTTGGGAGAGACCCCATACAAATGCAATCAGTGTTCGTACGCGTGCCGACAGAGTCACAGTCTCACCCAGCATATGAAGCAGCACGCCGCCGACAGACCTAGGAGTGATCGGCCTCACGCGTGCACTACGTGCAACAAAAAATTCTCGACGTCCGCTTTACTTGTCTCACACTCTCACACAATGGCCgcgcaaaaatttttaataatagccGCAATCGCGATCACTTTTTTGATGAACTCCTGCTCAGTAGACGGAAGGTACCTGCCCACGAGGTCCAACACAGACAGATTGGATAAATTGAAAGAGCTACTAAAAGAAattgcATTTGTGCTCGTGCATTTCTTCGTTTTTGCAAGATGCCAGGAACTATTCGTAAGTCCGCCGGAAGTCGAGGAAACAAATATAGATCCATCGTCTTTGGTAAAACGCAATTCGCTGTTAGCCGGCAACACAAACGAAACAATGCCTGAAGATGGCGGCATCTTATCTCTGGTGATTCAAATTCTCGGCGGCGTTCTTCAAGGCACGCTCGACTCCCAAGGAATCACATCCGATCACGTCAACAACGCCTTAAACATCTTTAGTCCCGAAAAAGTGCACGACGACCTCATCTTGTTCAGAAAAACTCTTAATTTAGCGCTACATGGCGGTTTTAGTCCGCTTGAATATTTCAAATCGAAGATCGCGTTTTACAACACGCAACCGGTGTCCGAAAACGGTCCTTTCGTCGCCTTCGAACCTGTGCTTCGTCCGGACGTACCCGAACGTATACAAAAAGTAGTCGATTTCGCTACCGAAAAAACGGAAAATGACGAAGTCAGCAGTACAATTGCGACTTTAACCGACGACGATattgcATTTGTGCTCGTGCATTTCTTCGTTTTTGCAAGATGCCAGGAACTATTCGTAAGTCCGCCGGAAGTCGACGAAACAAATATAGATTTATCGTCTTTGGTAAAACGCAATTCGCTGTTAGCCGGCAACACAAACGAAACAATGCCTGAAGATGGCGGCATCTTATCTCTGGTGATTCAAATTCTCGGCGGCGTTCTTCAAGGCACGCTCGACTCCCAAGGAATCACATCCGATCACGTCAACAACGCCTTAAACATCTTTAGTCCCGAAAAAGTGCACGACGACCTCATCTTGTTCAGAAAAACTCTTAATTTAGCGCTACGTTTTGTAACGTTCATCATGCGTTTCCTCCCGCGCATGACGGCAGATGGCGGTTTTAGTCCGCTTGAATACTTCAAATCGAAGATCGCGTTTTACAACACGCAACCGGTGTCCGAAAACGGTCCTTTCGTCGCCTTCGAACCTGTGCTTCGTCCGGACGTACCCGAACGTATACAAAAAGTAGTCGATTTCGCTACCGAAAAAACGGAAAATGACGAAGTCAGCAGTACAATTGCGACTTTAACCGACGACGATGTCAGAATGCTGGTTCCGtctaacaaaaacaacaaaaattcgcCAACAACAACTGTCGTTAGTATCACGCAATTCGTAAATCAACGTGCAACTTCGATAGCGAACGAACAAGTTTCGTCCACCACCAACTACCCGCCGACTCGTAGCAACTCGGGTGTTCCGATTACACCGCTTCCGTTAATACGACGTCACCCGACAGTTTTATCGAACGAATTTAACATCAAAGATTTGGAGTCCGACAACGATTTTGGTTCCGACTTCGGGCAGATACGTCGCAGCCGAATTGTGAAAAAAGAAGTTCCTTTCAAAAACTACCCCattgcATTTGTGCTCGTGCATTTCTTCGTTTTTGCAAGATGCCAGGAACTATTCGTAAGTCCGCCGGAAGTCGACGAAACAAATATAGATTTATCGTCTTTGGTAAAACGCAATTCGCTGTTAGCCGGCAACACAAACGAAACAATGCCTGAAGATGGCGGCATCTTATCTCTGGTGATTCAAATTCTCGGCGGCGTTCTTCAAGGCACGCTCGACTCCCAAGGAATCACACCCGATCACGTCAACAACGCCTTAAACATCTTTAGTCCCGAAAAAGTGCACGACGACCTCATCTTGTTCAGAAAAACTCTTAATTTAGCGCTACGTTTTGTAACGTTCATCATGCGTTTCCTCCCGCGCATGACGGCAGATGGCGGTTTTAGTCCGCTTGAATATTTCAAATCGAAGATCGCGTTTTACAACACGCAACCGGTGTCCGAAAACGGTCCTTTCGTCGCCTTCGAACCTGTGCTTCGTCCGGACGTACCCGAACGTATACAAAAAGTAGTCGATTTCGCTACCGAAAAAACGGAAAATGACGAAGTCAGCAGTACAATTGCGACTTTAACCGACGACGATGTCAGAATGTTGGTTCCGtctaacaaaaacaacaaaaattcgcCAACAACAACTGTCGTTAGTATCACGCAATTCGTAAATCAACGTGCAACTTCGATAGCGAACGAACAAGTTACGTCCACCACCAACTACCCGCCGACTCGTAGCAACTCGGGTGTTCCGATTACACCGCTTCCGTTAATACGACGTCACCCGACAGTTTTATCGAACGAATTTAACATCAAAGATTTGGAGTCCGACAACGATTTTGGTTCCGACTTCGGGCAGATACGTCGCAGCCGAATTGTGAAAAAAGAAGTTCCTTTCAAAAACTACCCCGTTCgacatcaataa
Protein Sequence: MKFDNICTACLRADEALINMHQDNIIEKFLSCTGLTAQNDYFNLCRSCEETLNLAYDFKVKCLNSHQVLLSYAEEEDVVVKNEHVSSTEVSQVIENLKQNFYVNTNCIQCGFVASNSLALSIHVSLVHKDLKGRWCRACNVECDDLPNHLETHHGDEATCNFCNKKFRSKARLAEHLPSHSDQRNFQCPFCSKTFILQRHLNVHVRKHNEDKSYKCHVCDMSFVQLRQLKKHLKGHEVSGKKTLCNVCGKEFKTVTKLKVHMRVHTGETPYKCSYCPKSVATRNQLVVHERTHTGEKPHVCHVCGKSFAQSSVLTTHMRLHTGPTITCKICNQKFCRESQLRLHLRRHTGEKPYRCTECGKSFIQRSHLVEHNKTHSDLRPHQCSYCDKAFKKSSSLKQHVQIHLGETPYKCNQCSYACRQSHSLTQHMKQHAADRPRSDRPHACTTCNKKFSTSALLVSHSHTMAAQKFLIIAAIAITFLMNSCSVDGRYLPTRSNTDRLDKLKELLKEIAFVLVHFFVFARCQELFVSPPEVEETNIDPSSLVKRNSLLAGNTNETMPEDGGILSLVIQILGGVLQGTLDSQGITSDHVNNALNIFSPEKVHDDLILFRKTLNLALHGGFSPLEYFKSKIAFYNTQPVSENGPFVAFEPVLRPDVPERIQKVVDFATEKTENDEVSSTIATLTDDDIAFVLVHFFVFARCQELFVSPPEVDETNIDLSSLVKRNSLLAGNTNETMPEDGGILSLVIQILGGVLQGTLDSQGITSDHVNNALNIFSPEKVHDDLILFRKTLNLALRFVTFIMRFLPRMTADGGFSPLEYFKSKIAFYNTQPVSENGPFVAFEPVLRPDVPERIQKVVDFATEKTENDEVSSTIATLTDDDVRMLVPSNKNNKNSPTTTVVSITQFVNQRATSIANEQVSSTTNYPPTRSNSGVPITPLPLIRRHPTVLSNEFNIKDLESDNDFGSDFGQIRRSRIVKKEVPFKNYPIAFVLVHFFVFARCQELFVSPPEVDETNIDLSSLVKRNSLLAGNTNETMPEDGGILSLVIQILGGVLQGTLDSQGITPDHVNNALNIFSPEKVHDDLILFRKTLNLALRFVTFIMRFLPRMTADGGFSPLEYFKSKIAFYNTQPVSENGPFVAFEPVLRPDVPERIQKVVDFATEKTENDEVSSTIATLTDDDVRMLVPSNKNNKNSPTTTVVSITQFVNQRATSIANEQVTSTTNYPPTRSNSGVPITPLPLIRRHPTVLSNEFNIKDLESDNDFGSDFGQIRRSRIVKKEVPFKNYPVRHQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -