Basic Information

Insect: Abscondita terminalis
Gene Symbol: -
Assembly: GCA_013368085.1
Location: JABVZW010002826.1:33630-48403[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 30 0.026 1.3 9.8 3.3 1 23 124 146 124 146 0.98

2 30 0.79 40 5.1 0.5 1 23 148 170 148 170 0.93

3 30 5.3 2.7e+02 2.5 0.2 11 23 181 193 179 193 0.90

4 30 0.002 0.1 13.3 7.3 1 23 199 222 199 222 0.97

5 30 0.001 0.052 14.2 5.2 1 23 228 250 228 250 0.98

6 30 0.0027 0.14 12.9 4.8 1 23 256 279 256 279 0.96

7 30 0.00062 0.032 14.9 4.5 1 23 285 307 285 307 0.98

8 30 0.46 24 5.8 6.1 3 23 315 335 313 335 0.97

9 30 0.00012 0.0059 17.2 6.8 1 23 341 363 341 363 0.98

10 30 0.0013 0.067 13.9 3.1 1 23 369 391 369 391 0.98

11 30 0.00047 0.024 15.3 5.1 1 23 397 419 397 419 0.98

12 30 0.0009 0.046 14.4 3.8 1 23 425 447 425 447 0.98

13 30 0.00032 0.016 15.8 6.6 1 23 453 475 453 475 0.98

14 30 0.02 1 10.1 8.1 1 23 481 503 481 503 0.97

15 30 0.00064 0.033 14.8 4.6 1 23 509 531 509 531 0.98

16 30 0.21 11 6.9 6.4 1 23 537 560 537 560 0.89

17 30 0.063 3.2 8.6 7.4 1 23 566 588 566 588 0.98

18 30 2.1 1.1e+02 3.8 0.5 9 23 595 610 594 610 0.92

19 30 0.00041 0.021 15.5 5.5 1 23 616 638 616 638 0.98

20 30 0.0039 0.2 12.4 1.2 1 23 644 667 644 667 0.96

21 30 0.012 0.61 10.8 6.9 1 23 673 695 673 695 0.98

22 30 0.46 24 5.8 6.1 3 23 703 723 701 723 0.97

23 30 0.00011 0.0054 17.3 4.6 1 22 729 750 729 750 0.96

24 30 0.00087 0.044 14.4 7.7 1 23 768 790 768 790 0.97

25 30 0.00023 0.012 16.3 3.6 3 23 798 818 796 818 0.98

26 30 8.2e-05 0.0042 17.7 5.0 1 23 824 846 824 846 0.99

27 30 0.07 3.6 8.4 7.9 1 23 852 875 852 875 0.97

28 30 0.0016 0.079 13.6 6.2 1 23 881 903 881 903 0.98

29 30 0.051 2.6 8.9 5.2 1 23 909 931 909 931 0.97

30 30 7.5e-06 0.00038 20.9 1.1 1 21 937 957 937 958 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	30	0.026	1.3	9.8	3.3	1	23	124	146	124	146	0.98
2	30	0.79	40	5.1	0.5	1	23	148	170	148	170	0.93
3	30	5.3	2.7e+02	2.5	0.2	11	23	181	193	179	193	0.90
4	30	0.002	0.1	13.3	7.3	1	23	199	222	199	222	0.97
5	30	0.001	0.052	14.2	5.2	1	23	228	250	228	250	0.98
6	30	0.0027	0.14	12.9	4.8	1	23	256	279	256	279	0.96
7	30	0.00062	0.032	14.9	4.5	1	23	285	307	285	307	0.98
8	30	0.46	24	5.8	6.1	3	23	315	335	313	335	0.97
9	30	0.00012	0.0059	17.2	6.8	1	23	341	363	341	363	0.98
10	30	0.0013	0.067	13.9	3.1	1	23	369	391	369	391	0.98
11	30	0.00047	0.024	15.3	5.1	1	23	397	419	397	419	0.98
12	30	0.0009	0.046	14.4	3.8	1	23	425	447	425	447	0.98
13	30	0.00032	0.016	15.8	6.6	1	23	453	475	453	475	0.98
14	30	0.02	1	10.1	8.1	1	23	481	503	481	503	0.97
15	30	0.00064	0.033	14.8	4.6	1	23	509	531	509	531	0.98
16	30	0.21	11	6.9	6.4	1	23	537	560	537	560	0.89
17	30	0.063	3.2	8.6	7.4	1	23	566	588	566	588	0.98
18	30	2.1	1.1e+02	3.8	0.5	9	23	595	610	594	610	0.92
19	30	0.00041	0.021	15.5	5.5	1	23	616	638	616	638	0.98
20	30	0.0039	0.2	12.4	1.2	1	23	644	667	644	667	0.96
21	30	0.012	0.61	10.8	6.9	1	23	673	695	673	695	0.98
22	30	0.46	24	5.8	6.1	3	23	703	723	701	723	0.97
23	30	0.00011	0.0054	17.3	4.6	1	22	729	750	729	750	0.96
24	30	0.00087	0.044	14.4	7.7	1	23	768	790	768	790	0.97
25	30	0.00023	0.012	16.3	3.6	3	23	798	818	796	818	0.98
26	30	8.2e-05	0.0042	17.7	5.0	1	23	824	846	824	846	0.99
27	30	0.07	3.6	8.4	7.9	1	23	852	875	852	875	0.97
28	30	0.0016	0.079	13.6	6.2	1	23	881	903	881	903	0.98
29	30	0.051	2.6	8.9	5.2	1	23	909	931	909	931	0.97
30	30	7.5e-06	0.00038	20.9	1.1	1	21	937	957	937	958	0.96

Sequence Information

Coding Sequence: ATGGTAGAAAACGcttgtcaaatttgtttaaaagcaaTAAAGGAAGTACCACAAAATCATTCCCGAAACTTATCGACTTTTCCTATAAAAACAGATTTGAGCATCGATGAATACTCACTTGCATGCAACGAATGTAGGATCAAATTTGATGAAGAATACTTAGGTTCTAAGCAgaacgaaaacatttttaaagctGAAAATCTATCGCAGTCGAACTTCTCTTCACATGTTGGCGAAGAAAATTTCGTAAGGGCAATCGAAGATGAGTTTGTCGAAGTTGCGGTTAAACATGAAAATATAATGGTAAAAGAAGAATGTGTGTTATTTAATGCGGATATGCCTATGTGCGTGGAagaatcggatattttgtaCTACTGCCATCGATGTACTTACGTTACTagcgataaacaaaaattaatcgatCACGTATTTACTCACAGATTTAAATGCAACCTGTGTCGTTACATTACGTTTGATAATTCCTCAATAGAGGAACACAATGAAATTCACTCGTCCaagaatagttttaaaaacgCTTCTAGACGTGCAGCCGACTTGAAGACGCACATGTTCAAACATTCCGGGGAGAAACCTTTCAGatgtgataagtgcgactacagGTGTTGCAGCAAAAGTGATTTATCTCGGCACAATAGAAGAATACATGttcaagaaaaaccgtttaaatgtaatttttgcgaTTATTGCAGCAGTGATTCCGGCAAACTGAAACAGCATATGTACAAACATTCTGGCGAGAAATCCTTCAGctgtgataagtgcgactacagGTGTTACAGCAAAAGTGATTTATCTCGGCACAATAAAAGAATACACGctcaagaaaaaccgtttagatgtaatttttgtgattattgcagcagACGTGCTGCCGACTTGAAGACGCACATGTTCAAACATTCCGGGGAGAAACCTTTCGGCTGTGATAAGTGCAACTATAAGTGTTGCAGCAAAAGGGATTTATCTCTGCACAATAGAATACACTCtcaagaaaaaccatttaaatgtaatttttgtgattattgtagCAAGACATCCGACAATCTGAAAAAGCACATGTATAAACATTCTAGGGAGAAGCCTTTCAGCTGTGATGTGTGCGACTACAGTTCTTgctacaaaaatgatttaactcGTCATAATAGAATACACGctcaagaaaaaccgtttaaatgcaatttttgtgattattgcagcagCGAATCGGGCAACCTAAAAAAACACATGTACAAACATTGCGGGGTGAAATCTTTCAGCTGTGATCAGTGCGAATACAAATCTCGTGATAGAAGTCACTTAACTCGTCATAATAGGGTACACACccaagaaaaaccgtttaaatgtaatttttgcgaTTACTGTAGCAGTGATTCCGGCAACCTGAAACAGCATATGCACAAACATTATGGGGAGAAACGTTTCAGCTGTGATCAGTGCGACTACAGGTGTTACAGCAGAAGTCATTTATCTCGCCACAATAAAAAACACACTCAAataaaaccgtttaaatgtaatttttgtgattattgtgGCAATACATCTGGCAACCTGAAAACGCACATGTATAAACATTCTGGCGAGAAACCGTTCAGTTGTAATAAGTGCGAATACAAGTGTTgcaacaaaaatgatttatctCGACACAATGGAAGAGTACACACTCATGAGAAACCGTTCAAATGtcatttttgtgattattgcagcagTGTAATCGGCGACTTGAAAAGACACTTACACAAACATGCTGGGGAGAAGTTGTTCAGCTGTAATAACAAAAGTGATTTATCTCGGCACAATAGAAGAATACATGttcaagaaaaaccgtttaaatgtaatttttgtgattattgcagcagTGATTCCGGCTACCTGAAAAAACATATGTACAAACATTCTGGGGAAAAATCCTTCAGCTGTGATATGTGCGACTATAGGGGTTACAGCAAAAGTGATTTATCTCGGCACAATAAAAGAATACACGctcaagaaaaaccgtttagatgtaatttttgtgattattgctgCAGTGAACCGGGCAGACTGAAAAAgcacatgtacaaacattctggCGAGAAACCTTTCGGCTGTGATAAGTGCAACTATAAGTGTTGCAGCAAAAGGGATTTATCTCTGCACAATAGAATACACTCtcaagaaaaaccatttaaatgtaatttttgtgattattgtagCAAGACATCCGACAATCTGAAAAAGCACATGAATCGCATCCAAACTCGATTGTCTCAGTACAATAAAATAGGCACCCAAGAGAAACtgtttaagtgtaatttttgtgattattgcgtCAGTAATTCACATCAGCTGAAAAAGCACATGTACAATCATCCCGGGAAGAAACCTTTCGGctgtgataagtgcgactacagTAGTTACAACAAAAGTCATTTACTTCGTCACACTAGAACACACACTCAAGAAAGACCGtttaaatgtactttttgtGATCACTCCAGTAGTACATCCAGCAACCTGAAAATGCATATGTACACACATTCTGGCGAGAAACGTTTcagctgcgacaagtgcgaGTACAGGTGTTGCTACAGAAGTGATTTATCTCGGCACAATAGAAGAACGCACactcaagaaaaaccgtttaaatgtaatcttTGCGATTATTGCAGCAGTGAATCCGGCTACTTAAAAAGGCACATGCACAGACATTCTGGGGAGAAACCTTTCAACTGTGATAAATGCGACTACGGGTGTCATAGCCGAAGTCAGTTATCTTCACACAATAGAATTCACACTCAAGAAAAACcgtataaatgtaattattgtgaTTATAGCAGTAGTCAATCCGGCAACCTAAAGAAGCACATCAAAAATTCAAGAGAGAAACTTTTCAGCTGTTCTAAGTGCGACTACAGaaaaattattgaagtaaTCAAACCAAAAATGTTGCCGCAGGTTTTGGGAAGTCAGCCAGAAGAAGGATTTCGATCGATGAAGGTGTTAGATGAGTATGTTCATTTTGGATGTGACGTTAAAGGAGTCGACAAGGGATtctatttgaataataaatgtatttaa
Protein Sequence: MVENACQICLKAIKEVPQNHSRNLSTFPIKTDLSIDEYSLACNECRIKFDEEYLGSKQNENIFKAENLSQSNFSSHVGEENFVRAIEDEFVEVAVKHENIMVKEECVLFNADMPMCVEESDILYYCHRCTYVTSDKQKLIDHVFTHRFKCNLCRYITFDNSSIEEHNEIHSSKNSFKNASRRAADLKTHMFKHSGEKPFRCDKCDYRCCSKSDLSRHNRRIHVQEKPFKCNFCDYCSSDSGKLKQHMYKHSGEKSFSCDKCDYRCYSKSDLSRHNKRIHAQEKPFRCNFCDYCSRRAADLKTHMFKHSGEKPFGCDKCNYKCCSKRDLSLHNRIHSQEKPFKCNFCDYCSKTSDNLKKHMYKHSREKPFSCDVCDYSSCYKNDLTRHNRIHAQEKPFKCNFCDYCSSESGNLKKHMYKHCGVKSFSCDQCEYKSRDRSHLTRHNRVHTQEKPFKCNFCDYCSSDSGNLKQHMHKHYGEKRFSCDQCDYRCYSRSHLSRHNKKHTQIKPFKCNFCDYCGNTSGNLKTHMYKHSGEKPFSCNKCEYKCCNKNDLSRHNGRVHTHEKPFKCHFCDYCSSVIGDLKRHLHKHAGEKLFSCNNKSDLSRHNRRIHVQEKPFKCNFCDYCSSDSGYLKKHMYKHSGEKSFSCDMCDYRGYSKSDLSRHNKRIHAQEKPFRCNFCDYCCSEPGRLKKHMYKHSGEKPFGCDKCNYKCCSKRDLSLHNRIHSQEKPFKCNFCDYCSKTSDNLKKHMNRIQTRLSQYNKIGTQEKLFKCNFCDYCVSNSHQLKKHMYNHPGKKPFGCDKCDYSSYNKSHLLRHTRTHTQERPFKCTFCDHSSSTSSNLKMHMYTHSGEKRFSCDKCEYRCCYRSDLSRHNRRTHTQEKPFKCNLCDYCSSESGYLKRHMHRHSGEKPFNCDKCDYGCHSRSQLSSHNRIHTQEKPYKCNYCDYSSSQSGNLKKHIKNSREKLFSCSKCDYRKIIEVIKPKMLPQVLGSQPEEGFRSMKVLDEYVHFGCDVKGVDKGFYLNNKCI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -