Basic Information

Insect: Abscondita terminalis
Gene Symbol: -
Assembly: GCA_013368085.1
Location: JABVZW010002542.1:80991-83178[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 0.00042 0.021 15.4 3.1 1 23 101 123 101 123 0.98

2 22 0.0007 0.036 14.7 4.0 1 23 129 151 129 151 0.98

3 22 0.041 2.1 9.2 4.6 1 23 157 179 157 179 0.95

4 22 0.73 37 5.2 6.0 2 23 186 207 185 207 0.96

5 22 0.0042 0.21 12.3 3.9 1 20 213 232 213 235 0.94

6 22 0.016 0.82 10.4 3.7 2 23 242 263 241 263 0.97

7 22 0.00036 0.018 15.6 6.0 1 23 269 291 269 291 0.98

8 22 0.013 0.66 10.7 0.5 1 23 297 319 297 319 0.99

9 22 0.0016 0.081 13.6 1.4 1 23 325 347 325 347 0.98

10 22 9.6e-05 0.0049 17.4 1.0 1 23 353 375 353 375 0.98

11 22 8.7e-05 0.0044 17.6 4.1 1 23 381 403 381 403 0.98

12 22 0.061 3.1 8.6 3.0 2 23 410 431 409 431 0.94

13 22 0.0034 0.17 12.6 1.4 1 20 437 456 437 459 0.94

14 22 8.8e-05 0.0045 17.6 2.7 2 23 466 487 465 487 0.97

15 22 0.0015 0.076 13.7 3.5 1 23 493 515 493 515 0.98

16 22 0.00015 0.0078 16.8 0.6 1 23 521 543 521 543 0.99

17 22 0.00097 0.049 14.3 1.6 1 23 549 571 549 571 0.98

18 22 0.00015 0.0077 16.8 1.0 1 23 577 599 577 599 0.98

19 22 3e-05 0.0015 19.0 2.4 1 23 605 627 605 627 0.98

20 22 7.8e-05 0.004 17.7 1.3 1 23 633 655 633 655 0.98

21 22 0.0033 0.17 12.6 0.8 2 20 662 680 661 683 0.92

22 22 0.00056 0.029 15.0 4.4 1 23 689 711 689 711 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	0.00042	0.021	15.4	3.1	1	23	101	123	101	123	0.98
2	22	0.0007	0.036	14.7	4.0	1	23	129	151	129	151	0.98
3	22	0.041	2.1	9.2	4.6	1	23	157	179	157	179	0.95
4	22	0.73	37	5.2	6.0	2	23	186	207	185	207	0.96
5	22	0.0042	0.21	12.3	3.9	1	20	213	232	213	235	0.94
6	22	0.016	0.82	10.4	3.7	2	23	242	263	241	263	0.97
7	22	0.00036	0.018	15.6	6.0	1	23	269	291	269	291	0.98
8	22	0.013	0.66	10.7	0.5	1	23	297	319	297	319	0.99
9	22	0.0016	0.081	13.6	1.4	1	23	325	347	325	347	0.98
10	22	9.6e-05	0.0049	17.4	1.0	1	23	353	375	353	375	0.98
11	22	8.7e-05	0.0044	17.6	4.1	1	23	381	403	381	403	0.98
12	22	0.061	3.1	8.6	3.0	2	23	410	431	409	431	0.94
13	22	0.0034	0.17	12.6	1.4	1	20	437	456	437	459	0.94
14	22	8.8e-05	0.0045	17.6	2.7	2	23	466	487	465	487	0.97
15	22	0.0015	0.076	13.7	3.5	1	23	493	515	493	515	0.98
16	22	0.00015	0.0078	16.8	0.6	1	23	521	543	521	543	0.99
17	22	0.00097	0.049	14.3	1.6	1	23	549	571	549	571	0.98
18	22	0.00015	0.0077	16.8	1.0	1	23	577	599	577	599	0.98
19	22	3e-05	0.0015	19.0	2.4	1	23	605	627	605	627	0.98
20	22	7.8e-05	0.004	17.7	1.3	1	23	633	655	633	655	0.98
21	22	0.0033	0.17	12.6	0.8	2	20	662	680	661	683	0.92
22	22	0.00056	0.029	15.0	4.4	1	23	689	711	689	711	0.98

Sequence Information

Coding Sequence: ATGTCAGAAACTACAacaaaatgcagaataaaagaagaatatcAATTTACCCCCCCGGACTACGACGTAAAGCTGCACCCGGAGTTGTCAATCTTCTCTACGAAAACGGAATTGACCATCGATGAACACCCGATCGAAAACAGCGACTGTAAGGTGGAAGTTGATTCCGATACTATACTAGATGCGTTTCCGAGCGAATTCTCTCGCCGCGATAACGATGAAGGAATTATTAAAGATGAATTTCTGCTATTCAACATGGACGTACCCATCGACGACTCGAAAACGagcgtaaaaaaattgtataattgtaaatcGTGCGATTATTCTAGTAATCAATCGGGAAACTTCCGAAGGCACATGTACAAACACACAGGTGAGTGGCCGTTCGAGTGCGACCAGTGCGACTACAAATGCGGCAACAAAACTTCGTTGATGAATCATAAAAGAACGCATTTAGACGAAAAACTATTCAAATGCGAATTGTGCGAATATTCGTGTACGAAACCGACCGATTTAAAATACCATTCCTTCAAACATTCGGGTGAGTGGCCTTGCGTGTGCGATCTGTGCGATTACAAAACGTATTCGAAATGTTTGTTGGATCGGCACAAGAAATCGCACAGCGccgaaaaattatataaatgtaagTTTTGTGATTATAGCGCTAAACGACCGCATACGTTACGAAGGCACACGTGGAAGCATTCGAACGAGTGGCCTTGGAGTTGCAGTAAGTGTAACTACAAATGCGGTGACAAAACCGATATGACTCGACACGAGAAAACGCACACTGcagaaaaatcgtttaaatgCAACTTTTGCGATTACAGCACTACGCattcgaaaaatttacaaaaccattTGTACAAACACTCGGGTAATTGGCCGTACAGGTGTGATAAGTGCGATTTCAAAACTACTGCTAAAATGGCATTGATTGGGCACGTAAGAAGACACACAAAAGAAAAACCGTTCAAATGCGATTTGTGCGATTACAGGAGTACAATATCgagaagtttaaaaaatcatatgtaCGTGCACTCCGGCGGGTGGCCTTTCATGTGCGAtaaatgcgattacaaaactagcaccaaaactttattaattcaGCATGTAAGAATACAcaacgaagaaaaaatatttaaatgtaaattgtgcgATTATTCGTGTTCGCGACCGGGCACTTTAAAAAATCACTTGTATAAACACTCTGGCGAATGGCCTTGGAGATGTGATAAATGTGACTACAAAACGTACACGAAGTGTCTATTGCTTCGGCACAAGGTAATTCACAGTTCAGAAAGGTTGTATAAATGTGATTTTTGTGAATACAGCGCGAAACGACCACGAACGTTAAAAAATCACATGTGGAAACATTCCATCGGGTTTCCTTCGAGTTGTAATAAATGCAACTATAAATTTAGGgacaaaaatgattttacgCAGCACCAGGCGACACACACGggacaaaagttgtttaaatgtAATCTTTGTGAATACTCCACGGCGCATTTGAAAAACTTACAAAACCATTTGTATAAACATTCGGGTGAGTGGCCTTACAGGTGTGCtaaatgcgattacaaaactatTTCCAAAACTGCGTTGATTGAACACATAAGAAAACACACCAAAGAAAAACCGTACAAATGTAATTTGTGCGATTACCGCAGTACAATATCgagaagtttaaaaaatcatatgtaCGTGCACTCCGGCGGGTGGCCTTACATGTGCGAtaaatgcgattacaaaactagttcgaaaaacttattaattcaGCACGTAATGACACATCGTGACGAAAAGCCTTTTAAATGTGAATTGTGCGGTTATTCGTGTGCGCAATCGGCAAATTTAAAAACGCACTTGTATAAACATTCGGGTAAATGGCCTTACAAATGTGAtaaatgcgactacaaaactAGCACGAAAGCTTTATTGGTGCGGCACGAAAGTACGCATAGTACAGAAAAATCGATTCAATGTAAATTGTGCGATTATTCTTGTGCTGTGCCGGGAAACATGAGGAGACACATGTGGAAACACTCGGCGGATTGGCCTTACACGTGTGACGCTTGCGGATACAAATGTCGCGACAAAACTGATTTTAATCgtcacttaaaaaaacattcaaattaa
Protein Sequence: MSETTTKCRIKEEYQFTPPDYDVKLHPELSIFSTKTELTIDEHPIENSDCKVEVDSDTILDAFPSEFSRRDNDEGIIKDEFLLFNMDVPIDDSKTSVKKLYNCKSCDYSSNQSGNFRRHMYKHTGEWPFECDQCDYKCGNKTSLMNHKRTHLDEKLFKCELCEYSCTKPTDLKYHSFKHSGEWPCVCDLCDYKTYSKCLLDRHKKSHSAEKLYKCKFCDYSAKRPHTLRRHTWKHSNEWPWSCSKCNYKCGDKTDMTRHEKTHTAEKSFKCNFCDYSTTHSKNLQNHLYKHSGNWPYRCDKCDFKTTAKMALIGHVRRHTKEKPFKCDLCDYRSTISRSLKNHMYVHSGGWPFMCDKCDYKTSTKTLLIQHVRIHNEEKIFKCKLCDYSCSRPGTLKNHLYKHSGEWPWRCDKCDYKTYTKCLLLRHKVIHSSERLYKCDFCEYSAKRPRTLKNHMWKHSIGFPSSCNKCNYKFRDKNDFTQHQATHTGQKLFKCNLCEYSTAHLKNLQNHLYKHSGEWPYRCAKCDYKTISKTALIEHIRKHTKEKPYKCNLCDYRSTISRSLKNHMYVHSGGWPYMCDKCDYKTSSKNLLIQHVMTHRDEKPFKCELCGYSCAQSANLKTHLYKHSGKWPYKCDKCDYKTSTKALLVRHESTHSTEKSIQCKLCDYSCAVPGNMRRHMWKHSADWPYTCDACGYKCRDKTDFNRHLKKHSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -