Basic Information

Insect: Abscondita terminalis
Gene Symbol: -
Assembly: GCA_013368085.1
Location: JABVZW010002424.1:286582-292815[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 33 0.012 0.61 10.8 1.1 1 23 109 131 109 131 0.97

2 33 0.62 32 5.4 1.9 1 23 133 155 133 155 0.98

3 33 0.002 0.1 13.3 3.2 1 23 191 213 191 213 0.98

4 33 0.0034 0.17 12.5 5.4 1 23 271 293 271 293 0.98

5 33 0.013 0.66 10.7 4.6 1 23 327 349 327 349 0.95

6 33 0.0054 0.28 11.9 4.0 1 23 355 377 355 377 0.97

7 33 0.012 0.63 10.8 1.8 1 23 383 405 383 405 0.98

8 33 0.051 2.6 8.9 2.7 2 23 412 433 411 433 0.97

9 33 0.00017 0.0088 16.6 4.2 1 23 439 461 439 461 0.98

10 33 0.0087 0.44 11.3 3.9 1 23 467 489 467 489 0.98

11 33 0.00056 0.029 15.0 3.1 1 23 495 517 495 517 0.98

12 33 0.053 2.7 8.8 8.1 1 23 523 545 523 545 0.98

13 33 0.0016 0.084 13.6 1.6 3 23 553 573 551 573 0.97

14 33 0.63 32 5.4 5.7 1 23 579 601 579 601 0.98

15 33 0.0051 0.26 12.0 1.2 3 23 609 629 607 629 0.97

16 33 0.00027 0.014 16.0 2.4 1 23 697 719 697 719 0.98

17 33 6.4 3.3e+02 2.3 1.1 1 16 721 736 721 739 0.69

18 33 0.00018 0.009 16.6 3.1 1 23 778 801 778 801 0.98

19 33 0.24 12 6.8 2.3 1 23 811 833 811 833 0.96

20 33 0.002 0.1 13.3 4.2 1 23 839 861 839 861 0.98

21 33 0.00032 0.016 15.8 3.0 1 23 867 889 867 889 0.98

22 33 0.00063 0.032 14.9 2.9 2 23 896 917 895 917 0.97

23 33 0.00013 0.0067 17.0 1.9 3 23 925 945 923 945 0.98

24 33 0.00063 0.032 14.9 2.9 2 23 952 973 951 973 0.97

25 33 0.0024 0.12 13.1 3.9 1 23 979 1001 979 1001 0.97

26 33 0.041 2.1 9.2 6.5 1 23 1019 1041 1019 1041 0.98

27 33 0.051 2.6 8.9 6.7 1 23 1047 1069 1047 1069 0.98

28 33 0.02 1 10.1 3.5 1 23 1075 1097 1075 1097 0.97

29 33 0.0059 0.3 11.8 2.6 1 23 1103 1125 1103 1125 0.98

30 33 0.00016 0.0084 16.7 4.9 1 23 1131 1153 1131 1153 0.98

31 33 0.00058 0.029 15.0 4.8 1 23 1159 1181 1159 1181 0.99

32 33 0.11 5.7 7.8 2.2 1 23 1187 1209 1187 1209 0.98

33 33 0.00015 0.0074 16.9 2.7 1 23 1215 1237 1215 1237 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	33	0.012	0.61	10.8	1.1	1	23	109	131	109	131	0.97
2	33	0.62	32	5.4	1.9	1	23	133	155	133	155	0.98
3	33	0.002	0.1	13.3	3.2	1	23	191	213	191	213	0.98
4	33	0.0034	0.17	12.5	5.4	1	23	271	293	271	293	0.98
5	33	0.013	0.66	10.7	4.6	1	23	327	349	327	349	0.95
6	33	0.0054	0.28	11.9	4.0	1	23	355	377	355	377	0.97
7	33	0.012	0.63	10.8	1.8	1	23	383	405	383	405	0.98
8	33	0.051	2.6	8.9	2.7	2	23	412	433	411	433	0.97
9	33	0.00017	0.0088	16.6	4.2	1	23	439	461	439	461	0.98
10	33	0.0087	0.44	11.3	3.9	1	23	467	489	467	489	0.98
11	33	0.00056	0.029	15.0	3.1	1	23	495	517	495	517	0.98
12	33	0.053	2.7	8.8	8.1	1	23	523	545	523	545	0.98
13	33	0.0016	0.084	13.6	1.6	3	23	553	573	551	573	0.97
14	33	0.63	32	5.4	5.7	1	23	579	601	579	601	0.98
15	33	0.0051	0.26	12.0	1.2	3	23	609	629	607	629	0.97
16	33	0.00027	0.014	16.0	2.4	1	23	697	719	697	719	0.98
17	33	6.4	3.3e+02	2.3	1.1	1	16	721	736	721	739	0.69
18	33	0.00018	0.009	16.6	3.1	1	23	778	801	778	801	0.98
19	33	0.24	12	6.8	2.3	1	23	811	833	811	833	0.96
20	33	0.002	0.1	13.3	4.2	1	23	839	861	839	861	0.98
21	33	0.00032	0.016	15.8	3.0	1	23	867	889	867	889	0.98
22	33	0.00063	0.032	14.9	2.9	2	23	896	917	895	917	0.97
23	33	0.00013	0.0067	17.0	1.9	3	23	925	945	923	945	0.98
24	33	0.00063	0.032	14.9	2.9	2	23	952	973	951	973	0.97
25	33	0.0024	0.12	13.1	3.9	1	23	979	1001	979	1001	0.97
26	33	0.041	2.1	9.2	6.5	1	23	1019	1041	1019	1041	0.98
27	33	0.051	2.6	8.9	6.7	1	23	1047	1069	1047	1069	0.98
28	33	0.02	1	10.1	3.5	1	23	1075	1097	1075	1097	0.97
29	33	0.0059	0.3	11.8	2.6	1	23	1103	1125	1103	1125	0.98
30	33	0.00016	0.0084	16.7	4.9	1	23	1131	1153	1131	1153	0.98
31	33	0.00058	0.029	15.0	4.8	1	23	1159	1181	1159	1181	0.99
32	33	0.11	5.7	7.8	2.2	1	23	1187	1209	1187	1209	0.98
33	33	0.00015	0.0074	16.9	2.7	1	23	1215	1237	1215	1237	0.98

Sequence Information

Coding Sequence: ATGTCCGAAATCACCACAACGACGTGCACAATTTGTTCAGGGCTGATTAAACATGAATTTGAACTAAACGACGATATAAAACCGATATCAAAATTAGAGTCTCCGTCAGAACAAAATCTGTGTATCACAGACAACCCAGTTGCATGCAATACAGTGGAGATTAACGCAATTGACCAATTGCGTAAATCTTTCGTCAAAGAAGAAATCAAACACGAACTTGCCGAAGATGGGATTAAGACCGAAGACTTGGTCGACGATGATTGCATATCATTTAACACTGACATCCCATTATGCGTTGAAGAAAAGTTTcgggtaaacattttttattattgcgatCAATGCAATTACGGCACTggtaacaaaaaagatttaacaaACCATGTTTTCTCTCACCGTTTCAAATGTAATCGGTGCAGCTATTCAACTCTCGACGGTTATTCGTTAGTAAATCACAAACGAACACATTTTGTGATTGATTCTTTAGATTGCGTAGGGAGTGAAAATTTTTGTGCACGATTTGATATAGGTGAAGAAAATTTTCGGAAGCCACCGCTAATgagtaaatgtttatttgaatgTCACGATTGCGGTTATCGGACTATTAGCAAAgttactttgaaatttcatatgAAGACTCATAAAGAAATTGACGAAGTTCCACTCTCTAACGATAGTTTAACAACGAACAAAATCGCTTCTGTTGCTTTACAACCCcactcaaaaaatattcatcgAATGTGCTTGAATCGACAAGTTATCAATACCTCAAAGAACGTTGCACACTTAAAGAAACGTTCATGTGAAGATTCTTTCAGTTGCGACGTTTgcaatttcaaaactaatacaaaatataatctaaaacatcataaaaaaatCCACTTGGacgaaaaactgtttaaatgtaGTTTGTACGATTACAGTTGCAACTTTCCGAAAGATTTAAAAGTGCACTCGATGAAACATTTAGGTGAACAACCTTTCAGTTGTGACAAATGCACGTAtaaaacttgtagaaaataTGATTTGGAACGGCACAAAGTTATCCACATTAatggaaaactatttaaatgtagtttgtgCGACTACAGTTGCAACTTTTCATACGATTTAAAAATGCACTTAGTGAAACATTCAGGTGACAAACTTTTCAGATGCGACAAATGCTCCTACGTAACTGCTAGAAAACTTGATAtgaaaaagcataaaaatattcactttgacgaaaaaccaattaaatgtaatttgtgcgAATACAGTTGTAATTTTTCACTTAGTTTAAAAGAACATTTGATGAAACATTTAGGAGAAAAACCTTTcagctgcgacaagtgcgattataaaactaatacaaGGTCGAATCTAAAACATCACGAAAGAATTCACTTggaagaaaaaccatttaaatgtagtttgtgCGAGTATAGTTGCAACTTTTTACGTAGTTTAAAAGCGCATTTGATGAAACATTCAGGTGAATTTCCTTTCAGTTGTGAAAAGTGCGATTataaatctaatacaaaatctaatctaaattatcacaaaaaaattcacttggaagaaaaactatttaaatgtagtttgtgCGAGTACAGTTGCAacttttcacataattttaaatcgCATCTGATGAAACATTCAGGTGAACTTCCTTTCGGTTGTGAACAGTGCGattataaaactaatacaaaatctAATCtgaattatcacaaaaaaatccacctgaaggaaaaattatttaaatgcagtttttgCGCTTACAGTTGCAACTTTATGTATACATTAAAAACGCACTTGTTGAAACATTCAGGTGAACAACCTTTCGGTTGCGACAAGTGCGCATACAAAACTAGTAGAAAATCTTATTTGCAACGGCACAAAATAGTCCATACTGAAGAAAAACCAATTACAGCAgagCTGAATATCACCGAAGACCCAGTTGCGTGTAATACCTGTAAGGTAGAGGTTGATGTAGTTTACCCGTTTGATACATCTATCGTTAAAGAAGAACTAGGAATTAAGACCGAATATGATGATGTGTTACCGAACACCGACATCCCACTACGTATTGAAGAAAAggtaaacattttgtattattgtgaCCAATGCGATTACTCgacaaataacaagaaaaatttaactagCCACGTTTTCACCCACCGTTTTAAATGTAATCGGTGCAGCTACACAACCTTTGATAATAATTCGTTATTAAGCCGCAAACAAGTGCTCGAATCTTTAGAATGTAAGCACGCTTGCGTAGGAAGTCATTCTTTAGATGAGCGTAATGATGTAAGTAAAGAAAAGTTGCCATCGGTGATGagtaaaagtttatttcaatGTCATGAATGTGGCTATCGGACTATTAGCAAAACTACTTTGAAATCTCATTTGTTAACAACGCACAAAATCGTCTCTGGTGGTAATAGTCTTTTCAGCTGCGACAAGTGCATCTACAAAACCAGCATTAAATCTAATTTGCGAAAGCACAAAACTAtccattttgaagaaaaaccatttaaatgtagtttatgCGAATACAGTTGCAATTTTTCGTATAGTTTAAAAGCACATTTGATGAAACATTCGGGTGAACAACATTTCAGTTGCGACAAGTGCGTCTACAAAACTAGTCGAAAAAGTAATTTGAACAAGCACAAAATCACCCATTTAgaagaaaaaccaattaaatgtGGTTTGTGCGATTACAGATGCAACTCTTCATATTCTCTAAAAACGCACATGTTGAAACATTCCGGCGAACAACCTTTCGGCTGCGACCagtgcgactacaaaactaGTCGAAAAAGTAATTTGAACAAGCACAAAATCACCCATTTAgaagaaaaaccaattaaatgtGGTTTGTGCGATTACAGATGCAACTCTTCATATTCTCTAAAAACGCACATGTTGAAACATTCCGGCGAACAACCTTTCGCCTGTGACAAGTGCGTCTACAAAACTAGTAGTAAATCTTGTTTGAAACGGCACATATCTACccatttcaaagaaaaaccatttaaatcaTTTGATGAAACATTCGGTGAACAACATTTCAGTTGCGACAAGTGCGTCTACAAATGTAGTagaaaatatgatttgtacaaacACAAAACTACCCACCTCgatgaaaaactatttaaatgcaatttgtgcAATTACAGTTGCAACTTTTCTCATCGTTTAAAAGCGCACTTGATGAATCATTCTGGTGAACAACCTTTcagctgcgacaagtgcgattttaagactaatacaaaatttaaactaaatcaacacaGAAGTATCCACACTGAAGCGAAACGATTTAAATGCAGTTTGTGCGACTACAGTAGCAACCTTTCGTGTAATTTAAAAGCGCACTTGATGAATCATTCGGGTGAACAACCTTTCaactgcgacaaatgcgattacaaaTGTAGTAGAAAAGGTAATTTGAAAACGCATCTAACCACCCACTTcgaagaaaaaccatttaaatgtaatttttgcgaTTACAGTTGCAGCTTGTCATATAATTTGAAAGAGCATTTGATGAAACATTCTGGTGAACAACCGTTCAGTTGTGACAAGTGCGCCTacaaaactaatagaaaatatGTATTCCAACAGCACGAACGTGTccacaataaagaaaaatcatttaaatgtaatttgtgcgATTACAGCAGTAAACGTTcggaatctttaaaaaaacactttattacACACTCTGATAGAATATAG
Protein Sequence: MSEITTTTCTICSGLIKHEFELNDDIKPISKLESPSEQNLCITDNPVACNTVEINAIDQLRKSFVKEEIKHELAEDGIKTEDLVDDDCISFNTDIPLCVEEKFRVNIFYYCDQCNYGTGNKKDLTNHVFSHRFKCNRCSYSTLDGYSLVNHKRTHFVIDSLDCVGSENFCARFDIGEENFRKPPLMSKCLFECHDCGYRTISKVTLKFHMKTHKEIDEVPLSNDSLTTNKIASVALQPHSKNIHRMCLNRQVINTSKNVAHLKKRSCEDSFSCDVCNFKTNTKYNLKHHKKIHLDEKLFKCSLYDYSCNFPKDLKVHSMKHLGEQPFSCDKCTYKTCRKYDLERHKVIHINGKLFKCSLCDYSCNFSYDLKMHLVKHSGDKLFRCDKCSYVTARKLDMKKHKNIHFDEKPIKCNLCEYSCNFSLSLKEHLMKHLGEKPFSCDKCDYKTNTRSNLKHHERIHLEEKPFKCSLCEYSCNFLRSLKAHLMKHSGEFPFSCEKCDYKSNTKSNLNYHKKIHLEEKLFKCSLCEYSCNFSHNFKSHLMKHSGELPFGCEQCDYKTNTKSNLNYHKKIHLKEKLFKCSFCAYSCNFMYTLKTHLLKHSGEQPFGCDKCAYKTSRKSYLQRHKIVHTEEKPITAELNITEDPVACNTCKVEVDVVYPFDTSIVKEELGIKTEYDDVLPNTDIPLRIEEKVNILYYCDQCDYSTNNKKNLTSHVFTHRFKCNRCSYTTFDNNSLLSRKQVLESLECKHACVGSHSLDERNDVSKEKLPSVMSKSLFQCHECGYRTISKTTLKSHLLTTHKIVSGGNSLFSCDKCIYKTSIKSNLRKHKTIHFEEKPFKCSLCEYSCNFSYSLKAHLMKHSGEQHFSCDKCVYKTSRKSNLNKHKITHLEEKPIKCGLCDYRCNSSYSLKTHMLKHSGEQPFGCDQCDYKTSRKSNLNKHKITHLEEKPIKCGLCDYRCNSSYSLKTHMLKHSGEQPFACDKCVYKTSSKSCLKRHISTHFKEKPFKSFDETFGEQHFSCDKCVYKCSRKYDLYKHKTTHLDEKLFKCNLCNYSCNFSHRLKAHLMNHSGEQPFSCDKCDFKTNTKFKLNQHRSIHTEAKRFKCSLCDYSSNLSCNLKAHLMNHSGEQPFNCDKCDYKCSRKGNLKTHLTTHFEEKPFKCNFCDYSCSLSYNLKEHLMKHSGEQPFSCDKCAYKTNRKYVFQQHERVHNKEKSFKCNLCDYSSKRSESLKKHFITHSDRI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -