Basic Information

Insect: Abscondita terminalis
Gene Symbol: -
Assembly: GCA_013368085.1
Location: JABVZW010002556.1:223855-226640[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.18 9.3 7.1 6.8 2 23 118 139 117 139 0.96

2 28 0.15 7.4 7.4 0.5 2 20 142 160 141 162 0.94

3 28 0.052 2.6 8.8 4.6 1 23 174 196 174 196 0.98

4 28 2.3e-05 0.0012 19.4 2.5 1 23 202 224 202 224 0.98

5 28 0.0058 0.29 11.8 5.9 1 23 230 252 230 252 0.98

6 28 0.0073 0.37 11.5 6.7 1 23 258 280 258 280 0.98

7 28 0.029 1.5 9.6 5.1 3 23 288 308 286 308 0.98

8 28 0.0046 0.23 12.2 4.3 1 23 314 336 314 336 0.98

9 28 0.00026 0.013 16.1 7.9 1 23 342 364 342 364 0.98

10 28 0.00026 0.013 16.1 2.3 1 23 370 392 370 392 0.98

11 28 0.034 1.7 9.4 5.6 3 23 400 420 398 420 0.98

12 28 0.028 1.4 9.7 5.9 1 23 426 448 426 448 0.98

13 28 8.6e-05 0.0044 17.6 6.0 1 23 454 476 454 476 0.98

14 28 9.6e-05 0.0049 17.4 4.8 1 23 482 504 482 504 0.98

15 28 0.015 0.76 10.5 5.5 1 23 510 532 510 532 0.98

16 28 4.6e-05 0.0024 18.4 5.5 1 23 538 560 538 560 0.98

17 28 2.2e-05 0.0011 19.4 7.4 1 23 566 588 566 588 0.98

18 28 0.00053 0.027 15.1 4.4 1 23 594 616 594 616 0.98

19 28 0.017 0.85 10.4 6.9 1 23 622 644 622 644 0.98

20 28 0.00075 0.038 14.6 4.7 1 23 650 672 650 672 0.99

21 28 0.0004 0.021 15.5 2.9 1 23 678 701 678 701 0.97

22 28 0.00024 0.012 16.2 5.4 1 23 707 729 707 729 0.98

23 28 0.018 0.92 10.3 1.5 1 23 735 758 735 758 0.96

24 28 0.021 1.1 10.0 6.3 1 23 764 786 764 786 0.98

25 28 0.00024 0.012 16.2 2.7 1 23 792 814 792 814 0.98

26 28 0.00015 0.0078 16.8 2.1 1 23 820 842 820 842 0.98

27 28 0.016 0.79 10.5 0.9 1 23 848 870 848 870 0.97

28 28 0.00049 0.025 15.2 6.3 1 23 876 898 876 898 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.18	9.3	7.1	6.8	2	23	118	139	117	139	0.96
2	28	0.15	7.4	7.4	0.5	2	20	142	160	141	162	0.94
3	28	0.052	2.6	8.8	4.6	1	23	174	196	174	196	0.98
4	28	2.3e-05	0.0012	19.4	2.5	1	23	202	224	202	224	0.98
5	28	0.0058	0.29	11.8	5.9	1	23	230	252	230	252	0.98
6	28	0.0073	0.37	11.5	6.7	1	23	258	280	258	280	0.98
7	28	0.029	1.5	9.6	5.1	3	23	288	308	286	308	0.98
8	28	0.0046	0.23	12.2	4.3	1	23	314	336	314	336	0.98
9	28	0.00026	0.013	16.1	7.9	1	23	342	364	342	364	0.98
10	28	0.00026	0.013	16.1	2.3	1	23	370	392	370	392	0.98
11	28	0.034	1.7	9.4	5.6	3	23	400	420	398	420	0.98
12	28	0.028	1.4	9.7	5.9	1	23	426	448	426	448	0.98
13	28	8.6e-05	0.0044	17.6	6.0	1	23	454	476	454	476	0.98
14	28	9.6e-05	0.0049	17.4	4.8	1	23	482	504	482	504	0.98
15	28	0.015	0.76	10.5	5.5	1	23	510	532	510	532	0.98
16	28	4.6e-05	0.0024	18.4	5.5	1	23	538	560	538	560	0.98
17	28	2.2e-05	0.0011	19.4	7.4	1	23	566	588	566	588	0.98
18	28	0.00053	0.027	15.1	4.4	1	23	594	616	594	616	0.98
19	28	0.017	0.85	10.4	6.9	1	23	622	644	622	644	0.98
20	28	0.00075	0.038	14.6	4.7	1	23	650	672	650	672	0.99
21	28	0.0004	0.021	15.5	2.9	1	23	678	701	678	701	0.97
22	28	0.00024	0.012	16.2	5.4	1	23	707	729	707	729	0.98
23	28	0.018	0.92	10.3	1.5	1	23	735	758	735	758	0.96
24	28	0.021	1.1	10.0	6.3	1	23	764	786	764	786	0.98
25	28	0.00024	0.012	16.2	2.7	1	23	792	814	792	814	0.98
26	28	0.00015	0.0078	16.8	2.1	1	23	820	842	820	842	0.98
27	28	0.016	0.79	10.5	0.9	1	23	848	870	848	870	0.97
28	28	0.00049	0.025	15.2	6.3	1	23	876	898	876	898	0.98

Sequence Information

Coding Sequence: ATGGCAGAAACGACAATGTcttgtcaaatttgtttaaaagaaataagggAAGGAACCCTAAACAACGACCCTAAGTCGTCGACCTTTCCTATAAAAACAGATTTGACCATCGATGAAAATTCACTTGCGTGCAACGATTGCAAGCTCGAAATCGATGAAGAACACCAAGTAttcgttcaaaatttaaagactGAAAATCTACCGCCGAAgaactttgaagaaaatttcttaaaaacgaTCAAAGATGAGTTTGTCGATGTTGCGGttcataatgaaaatattgtaaaagaaGAACTTGTGTCATTTAACGTGGATGTAACTATCTGCGGGAAAGAATCTGATATTTCTTGCTACTGTCATCAATGCAATTACTTTACTaacgataaagaaaaattaactaatcACGTATTTACTCACTTATTGAAATGCGATTTCTGCAGTTATACTACGTTTGATAATGTCTCGTTAGAGAAGCacttgtttaattgtaatttctgTAACGTGTGTCGAGAGTCGCCTTTCATCTGTGATGAGTGCGATTTTAGGTGTTGCAGCGAAAGTAGTTTGACTCCGCATAAAAGAACGCACACTCAAGAAAAACagtttaagtgtaatttttgtgattatagCAGCATTCGAGCAAGAAATTTGACAAGGCACATGTTCACCCATTCTGGGGAGAAACCTTTCAGTTGCGATAAGTGCGACTATAGGTGTCGCAGCACAACTACTTTGACCCTGCATAAAAGAACACATACtcaagaaaaaccatttaaatgtaatttttgtgattattgcagcaATTTTTTCGGAAATCTGAAAAGgcacatgtacaaacattctggACAGAAACCTTTCGGCTGTGACAAGTGCGACTATAAGTGTTGCAGCAAAAGTGAATTTGTCCTGCACACGAGAATACACACtcaagaaaaaccatttaagtGTAGTCTTTGCGATTATTGCGGCAGATCATCCCAAAAGCTGAAAATCCACATGTACAGACATTCTGGGGAGAAACCTTTCAGCTGCTTTAAGTGCGACTATACGTGTTGCAACAAGAGTGAATTAATCCGGCACACGAGGACACACACCAAAGAAAAACCTTTTAAGTGTAATGTTTGCGATTATCGCGGAAGTTCATCGCGAAGCCTGAAAACgcacatgtacaaacattctggCGAGAAACCTTTCGGCTGTGATGAGTGCGACTATAGATGTTGCAGCAAAACTAAATTGATCCTGCACACGAGAAGACACactcaagaaaaaccgtttaagtgtaatttttgtgattattgcagcaATTTTTTCGCAAACCTGAAATTGCACATGTACAAACACTCGGGACAGAAACCTTTCAGctgtgataagtgcgactatACGTGTTGCAACAAGGGTGAATTGATCCGGCACACGAGGACACACACCAAAGAAAAACCTTTTAAGTGTAATGTTTGCGATTATTGCGGAAGTTCATCGCGGAACTTAAAAAAgcacatgtacaaacattctggGCAGAAACCTTTCAGCTGTGATGAGTGCGACTATAGATGTTGCTTCAAAAGCGATTTATCTTTGCACAATCGAATACATGCTAgagaaaaactgtttaaatgtaatttctgTGATTATTGCAGCAGTACGTCCACCAATCTGAGAAAACATATGATCAGACATTCTGGGGAGAAACCTTTCAGCTGTTATAAGTGCGACTATACGTGTTGCAACAAGAGTGACTTGATCCGGCACATGAGGACACACACCAAAGAAAAACCTTTTAAGTGTAATGTTTGCGATTATTGCGGAAGTTCATCGCGAAGCCTGAAAACgcacatgtacaaacattctggGGAGAAACCTTTCAGCTGTTATGAGTGCGACTATAGGTGTTGCAGCAAAAATAGTTTGATTCTGCACACGAGAAGACACACccaagaaaaaccgtttaagtgtagtttttgtgattattgcagcaTTATTTCTAGTAACTTGAAAAAGCATATGTACACACATTCTGAGGAAAAACTTTTCAGctgtgataagtgcgactacaaatccaccaataaaagttatttatctCGGCACAATAGAAGAATACACGgtcaagaaaaaccgtttaaatgtaatttttgtgattattgcagcagTGATTCCGGCTACCTGAAAAGGCATATGTACAAACATTCTCGGGAAAAATCCTTCAGCTGTGATATGTGCGACTACAAGGGTTACAGCAAAACCGATTTATCTCggcacaataaaaaaatacaccctcaagaaaaaccgtttaagtgtaatttttgtgattattgcagcaATATTTTCAGTAGCTTGAAAAGGCATATGTACAAACATTCTGAGGAAAAACTTTTCAGctgtgataagtgcgactacaaatccagcaataaaagttatttatcaCGGCACAATAGAATACATACTcgagaaaaaccgtttaaatgcaaattttgtgattttagcAGCAGCCAAACGGGCAACTTGATGCGACACATGTACATACATTCTGGAAAGAAGCCTTTCAGctgtgataagtgcgactacaagGGTTACAGCAAAGGTCTTTTATCTCGGCACAATCAAATACACGCTCAAAAAAAACCGTTCAAGTGTGATTTTTGTAGTTATTGCAGCAATAGATCTGACAACCTGAAAAGgcacatgtacaaacattcGGTGGAGAAATCTTCAAGCTGTGTTAGCCAAAGCTCTTAA
Protein Sequence: MAETTMSCQICLKEIREGTLNNDPKSSTFPIKTDLTIDENSLACNDCKLEIDEEHQVFVQNLKTENLPPKNFEENFLKTIKDEFVDVAVHNENIVKEELVSFNVDVTICGKESDISCYCHQCNYFTNDKEKLTNHVFTHLLKCDFCSYTTFDNVSLEKHLFNCNFCNVCRESPFICDECDFRCCSESSLTPHKRTHTQEKQFKCNFCDYSSIRARNLTRHMFTHSGEKPFSCDKCDYRCRSTTTLTLHKRTHTQEKPFKCNFCDYCSNFFGNLKRHMYKHSGQKPFGCDKCDYKCCSKSEFVLHTRIHTQEKPFKCSLCDYCGRSSQKLKIHMYRHSGEKPFSCFKCDYTCCNKSELIRHTRTHTKEKPFKCNVCDYRGSSSRSLKTHMYKHSGEKPFGCDECDYRCCSKTKLILHTRRHTQEKPFKCNFCDYCSNFFANLKLHMYKHSGQKPFSCDKCDYTCCNKGELIRHTRTHTKEKPFKCNVCDYCGSSSRNLKKHMYKHSGQKPFSCDECDYRCCFKSDLSLHNRIHAREKLFKCNFCDYCSSTSTNLRKHMIRHSGEKPFSCYKCDYTCCNKSDLIRHMRTHTKEKPFKCNVCDYCGSSSRSLKTHMYKHSGEKPFSCYECDYRCCSKNSLILHTRRHTQEKPFKCSFCDYCSIISSNLKKHMYTHSEEKLFSCDKCDYKSTNKSYLSRHNRRIHGQEKPFKCNFCDYCSSDSGYLKRHMYKHSREKSFSCDMCDYKGYSKTDLSRHNKKIHPQEKPFKCNFCDYCSNIFSSLKRHMYKHSEEKLFSCDKCDYKSSNKSYLSRHNRIHTREKPFKCKFCDFSSSQTGNLMRHMYIHSGKKPFSCDKCDYKGYSKGLLSRHNQIHAQKKPFKCDFCSYCSNRSDNLKRHMYKHSVEKSSSCVSQSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -