Basic Information

Insect: Abscondita terminalis
Gene Symbol: -
Assembly: GCA_013368085.1
Location: JABVZW010001119.1:5191-8046[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 0.019 0.98 10.2 0.4 2 23 82 103 81 103 0.96

2 29 0.0023 0.12 13.1 0.2 1 19 105 123 105 125 0.96

3 29 3 1.5e+02 3.3 0.3 3 23 126 146 124 146 0.94

4 29 0.48 24 5.8 3.6 1 22 165 186 165 186 0.97

5 29 7e-05 0.0035 17.9 1.9 1 23 229 251 229 251 0.99

6 29 0.0032 0.17 12.6 0.6 1 23 257 279 257 279 0.94

7 29 7.4e-06 0.00037 20.9 1.2 1 23 285 307 285 307 0.99

8 29 0.02 1 10.2 0.4 1 23 313 335 313 335 0.96

9 29 0.00027 0.014 16.0 1.4 1 23 341 363 341 363 0.98

10 29 0.00049 0.025 15.2 1.1 1 23 369 391 369 391 0.96

11 29 7.8e-06 0.0004 20.9 1.7 1 23 396 418 396 418 0.98

12 29 0.0059 0.3 11.8 0.5 2 23 425 446 424 446 0.95

13 29 3.5e-05 0.0018 18.8 3.2 1 23 452 474 452 474 0.98

14 29 0.011 0.58 10.9 2.3 2 23 481 503 480 503 0.94

15 29 0.0004 0.02 15.5 1.0 3 23 511 531 509 531 0.98

16 29 0.012 0.63 10.8 1.5 1 23 538 560 538 560 0.99

17 29 0.14 6.9 7.5 5.3 1 23 566 588 566 588 0.94

18 29 7.1e-05 0.0036 17.8 1.3 1 23 594 616 594 616 0.98

19 29 0.0047 0.24 12.1 1.6 1 23 622 644 622 644 0.97

20 29 0.00017 0.0089 16.6 1.0 3 23 652 672 650 672 0.97

21 29 0.00099 0.051 14.2 2.2 1 23 678 700 678 700 0.96

22 29 0.00081 0.041 14.5 2.4 2 23 707 728 706 728 0.98

23 29 0.0044 0.22 12.2 1.5 1 23 734 756 734 756 0.96

24 29 0.0063 0.32 11.7 1.9 1 23 762 784 762 784 0.98

25 29 0.025 1.3 9.9 1.1 3 23 792 812 790 812 0.95

26 29 0.0035 0.18 12.5 1.7 1 23 818 840 818 840 0.99

27 29 0.015 0.76 10.5 0.2 3 23 848 868 846 868 0.97

28 29 8.9e-05 0.0045 17.5 1.3 1 23 874 896 874 896 0.98

29 29 0.029 1.5 9.6 1.0 3 23 904 924 902 924 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	0.019	0.98	10.2	0.4	2	23	82	103	81	103	0.96
2	29	0.0023	0.12	13.1	0.2	1	19	105	123	105	125	0.96
3	29	3	1.5e+02	3.3	0.3	3	23	126	146	124	146	0.94
4	29	0.48	24	5.8	3.6	1	22	165	186	165	186	0.97
5	29	7e-05	0.0035	17.9	1.9	1	23	229	251	229	251	0.99
6	29	0.0032	0.17	12.6	0.6	1	23	257	279	257	279	0.94
7	29	7.4e-06	0.00037	20.9	1.2	1	23	285	307	285	307	0.99
8	29	0.02	1	10.2	0.4	1	23	313	335	313	335	0.96
9	29	0.00027	0.014	16.0	1.4	1	23	341	363	341	363	0.98
10	29	0.00049	0.025	15.2	1.1	1	23	369	391	369	391	0.96
11	29	7.8e-06	0.0004	20.9	1.7	1	23	396	418	396	418	0.98
12	29	0.0059	0.3	11.8	0.5	2	23	425	446	424	446	0.95
13	29	3.5e-05	0.0018	18.8	3.2	1	23	452	474	452	474	0.98
14	29	0.011	0.58	10.9	2.3	2	23	481	503	480	503	0.94
15	29	0.0004	0.02	15.5	1.0	3	23	511	531	509	531	0.98
16	29	0.012	0.63	10.8	1.5	1	23	538	560	538	560	0.99
17	29	0.14	6.9	7.5	5.3	1	23	566	588	566	588	0.94
18	29	7.1e-05	0.0036	17.8	1.3	1	23	594	616	594	616	0.98
19	29	0.0047	0.24	12.1	1.6	1	23	622	644	622	644	0.97
20	29	0.00017	0.0089	16.6	1.0	3	23	652	672	650	672	0.97
21	29	0.00099	0.051	14.2	2.2	1	23	678	700	678	700	0.96
22	29	0.00081	0.041	14.5	2.4	2	23	707	728	706	728	0.98
23	29	0.0044	0.22	12.2	1.5	1	23	734	756	734	756	0.96
24	29	0.0063	0.32	11.7	1.9	1	23	762	784	762	784	0.98
25	29	0.025	1.3	9.9	1.1	3	23	792	812	790	812	0.95
26	29	0.0035	0.18	12.5	1.7	1	23	818	840	818	840	0.99
27	29	0.015	0.76	10.5	0.2	3	23	848	868	846	868	0.97
28	29	8.9e-05	0.0045	17.5	1.3	1	23	874	896	874	896	0.98
29	29	0.029	1.5	9.6	1.0	3	23	904	924	902	924	0.96

Sequence Information

Coding Sequence: atggaatttaatttaaacaacgaTTCAAAGATAAAcGATCCATGCATGACCGAGAATCCAGTCGTCCCAATTAAGACGGAAATCGAAGAAACACATCAACCGTACATACTTCATTCGTATCTTGTTAAAGACGAAGTTAAACAGGAGTTTCTCGAGGATTCGATTAAGACTGAGGAAATTATCGATGATGGATGTGTGTCTTTCAACACCGACATGCCTTCGTGCATTGAAGAATGTATTTTGTATTGCGACCAATGTAGTTACGGCACAAACGacaaacgtaatttaattgatCATGTTTTTACTCACCGTTTCAAATGTAACGAATGTAATTACTCAACTCCTGATAGTTCGATGTTAATAACTCACTCGCATTGCGTAACATGTAATTTTGTTTGCGTAGGAATTGATGTTTTGAATGAACATATGTCTTCGCATATCGCTGTAAAAGACGAGAAATACGGGGAGCTATCAAAAATCGAcgaagatttatttaaatgccACGATTGTCTTTACAGCACAAATTGTAAGAGCGCCTTGAAACTGCATGTGAGAACGTGTTTAAATGGACAAATTGCAAAGGCGACATTGCGAAATATCGTGAAGTGTGAAAATTGTGAGTATTCAAAATGTAACAACCAAACGTGTTCCAAACACATAGTCATAAATTCcggaacaaaattatttaaatgcgcTTTGTGCGATTACAGTACTAAACGTCAGAGAGATTTAAGAATTCATTTGAAGAAACATTCGGCTGAACCTAGCTTtagctgcgacaagtgcgattacaaaacgTACGTCAAAAGTCAGTTGGCGAGGCACGAAGTGGTTCATTCCGAAAAGAAAGCATTTAAATGCAGTATGTGCGATTACGGTACTAAACGCCGAAGTGACTTGAAAGTACATTTGAGGATACATTCTGGTGAACCAaattttagctgcgacaaatgcgattacaaaacatACATCAAAGGTCAATTGGTGAGACACGAAATAGTCCATTCTAAACAAAAAGCGTATAAATGCGGTTTGTGCGATTTCAGCACTAAACGTCGAGGTTACTTAAAGATACATTTGAAGCTACATTCGGGTAAACGTAATTTTAACTGCGACAAGTGCGGCTACAAAACTTACAGCAAAAGTCAATTGGCGAATCACAAAATAGTTCATTCGGAACAAACCTTCAAGTGCACTTTGTGCGATTACAGCACAAAACGTCGGGGCGACTTAAACAGACATTTGAAGATACATTCGGGCGATCCGGATCTtagctgcgacaagtgcgattacaaaacATACAGCAAATATCAACTGGCGAGCCACGAATTAGTCCATTCCGAACAAAAAACTTTCGAATGCAGTTTGTGCGATTACTGCACTAAACGTCGGAATGACTTGATAAAGCATATGAAGGTACATTCGGGTGAGCCTAATCTTAGCTGCaacaagtgcgactacaaaacgtACAGGAAAAAACAACTTGCgaatcacaataaaatattccatTCTGAAGAAAAAGCGTTTGGATGCAGTTTGTGCGTTTACAGCACAAAACGCCGTAGTAACTTGGAAAAGCATTTGAAGATACATTCGGGCGAacctaaaacttttaaatgcagTTTGTGTGCTTACAGCAGTAATTATCTGGGTAACTTTAAAGTGCATTTGAAGAGGCATTCGGGTGGACCTAATTTTTGCTGCGACCTTTGCGACCACAAAACGTACAGCAGAAGTCAGTTGGTGAGACATAAACTAGACCATTCtgaacaaaaactatttaaatgcaCTTTGTGCGATTTCACCACGAAAAATCCGTATTATTTGAACGTTCATTTGAAGATACATTTGGGCGAACGTGATTttagctgcgacaaatgcgattacaaaacgtACAGCAAAAACCAGCTCGCGAGCCACAAATTGGTTCATTGTGAACAGAAAGCGTTTGGATGCAGTTTTTGCGATTACAGCACTAAACGCCGTAGTgacttaaataaacatttgattatACATTCGGGTGAACGtaattttagctgcgacaagtgcgactacaacACATACAGCAAAAGTCAATTGATGAGACATAAACTAGAACATTccgaacaaaaattgaataaatgcgGTTTATGCGATTTCAGCACTAAACATTCGAGTTACTTAAAGGTACATTTGAAGATACATTCGGGTGACCGCAATTTTAACTGCGACATATGCGACTACAAAACGTATAGCAAAAATATGTTGGAGAAACACAAAACAGTTCATTCTGAAAAAATACCGTTTAAATGTACTTTGTGCGATTTCATCACTAATCGCCGGAGTGACTTGAAATTTCATTTGAGGATACATTCGGGCGAAGCTAATTTtggctgcgacaaatgcgactacaaaacgTACAGCAAAAATCAATTGGTGAGACATAAACTAGGCCATTCTGAACAAAAAACGTATAAATGCGGTGTGTGCGATTTCAGCAATAAAAACTTTAGTTCCTTAAAAGCGCATTTGAAGAAACATTCGACCAAACGTATTTTTGGCTGTGACGAATGCGACTACACGGCATACAGAAAAGACATGTTGGCGAGTCACAAAATGGTCCATTCTGAACATAAACCATTCAAATGCGGTTTGTGCGATTACAGCACTAAACGCCAAAGGGACTTGAACGTTCATTTTAGGGTACATTCGGGCGAATCTAGTTTtggctgcgacaaatgcgactacaaaacgTATAGTCGCGCAAAGTTGAAGAACCACAAAATAATCCATTCTGATCAAGAACCTTTAAATGCGGTTTGTGCCTAA
Protein Sequence: MEFNLNNDSKINDPCMTENPVVPIKTEIEETHQPYILHSYLVKDEVKQEFLEDSIKTEEIIDDGCVSFNTDMPSCIEECILYCDQCSYGTNDKRNLIDHVFTHRFKCNECNYSTPDSSMLITHSHCVTCNFVCVGIDVLNEHMSSHIAVKDEKYGELSKIDEDLFKCHDCLYSTNCKSALKLHVRTCLNGQIAKATLRNIVKCENCEYSKCNNQTCSKHIVINSGTKLFKCALCDYSTKRQRDLRIHLKKHSAEPSFSCDKCDYKTYVKSQLARHEVVHSEKKAFKCSMCDYGTKRRSDLKVHLRIHSGEPNFSCDKCDYKTYIKGQLVRHEIVHSKQKAYKCGLCDFSTKRRGYLKIHLKLHSGKRNFNCDKCGYKTYSKSQLANHKIVHSEQTFKCTLCDYSTKRRGDLNRHLKIHSGDPDLSCDKCDYKTYSKYQLASHELVHSEQKTFECSLCDYCTKRRNDLIKHMKVHSGEPNLSCNKCDYKTYRKKQLANHNKIFHSEEKAFGCSLCVYSTKRRSNLEKHLKIHSGEPKTFKCSLCAYSSNYLGNFKVHLKRHSGGPNFCCDLCDHKTYSRSQLVRHKLDHSEQKLFKCTLCDFTTKNPYYLNVHLKIHLGERDFSCDKCDYKTYSKNQLASHKLVHCEQKAFGCSFCDYSTKRRSDLNKHLIIHSGERNFSCDKCDYNTYSKSQLMRHKLEHSEQKLNKCGLCDFSTKHSSYLKVHLKIHSGDRNFNCDICDYKTYSKNMLEKHKTVHSEKIPFKCTLCDFITNRRSDLKFHLRIHSGEANFGCDKCDYKTYSKNQLVRHKLGHSEQKTYKCGVCDFSNKNFSSLKAHLKKHSTKRIFGCDECDYTAYRKDMLASHKMVHSEHKPFKCGLCDYSTKRQRDLNVHFRVHSGESSFGCDKCDYKTYSRAKLKNHKIIHSDQEPLNAVCA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -