Basic Information

Insect: Abscondita terminalis
Gene Symbol: -
Assembly: GCA_013368085.1
Location: JABVZW010002424.1:429880-436479[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 38 0.002 0.1 13.3 1.9 1 23 122 144 122 144 0.98

2 38 2.8 1.4e+02 3.4 1.3 1 23 146 168 146 168 0.93

3 38 5.2 2.6e+02 2.5 6.6 3 23 241 261 233 261 0.87

4 38 3.9 2e+02 2.9 2.8 1 23 288 308 288 308 0.90

5 38 1.8 91 4.0 2.2 1 23 314 337 314 337 0.96

6 38 7.1e-05 0.0036 17.9 2.2 1 23 343 365 343 365 0.98

7 38 0.00085 0.043 14.5 5.6 1 23 371 393 371 393 0.98

8 38 6.8 3.5e+02 2.2 0.4 1 12 399 410 399 412 0.85

9 38 0.00022 0.011 16.3 2.2 1 23 439 461 439 461 0.98

10 38 0.009 0.46 11.2 7.7 1 23 467 489 467 489 0.98

11 38 6.6e-05 0.0034 18.0 2.2 1 23 495 517 495 517 0.98

12 38 0.00041 0.021 15.5 2.6 1 23 523 545 523 545 0.98

13 38 0.00019 0.0097 16.5 2.0 1 23 551 573 551 573 0.98

14 38 0.00055 0.028 15.1 4.0 1 23 579 601 579 601 0.98

15 38 0.017 0.84 10.4 3.8 1 23 607 629 607 629 0.98

16 38 0.00017 0.0086 16.7 3.9 1 23 635 657 635 657 0.98

17 38 0.00012 0.0061 17.1 3.4 1 23 663 685 663 685 0.98

18 38 0.0056 0.29 11.9 4.8 1 23 691 713 691 713 0.98

19 38 0.0017 0.086 13.5 3.8 1 23 719 741 719 741 0.98

20 38 0.0021 0.11 13.2 5.4 1 23 747 769 747 769 0.98

21 38 8.4e-05 0.0043 17.6 1.1 1 23 775 797 775 797 0.98

22 38 0.0021 0.11 13.2 5.4 1 23 803 825 803 825 0.98

23 38 0.017 0.86 10.4 4.6 1 23 988 1010 988 1010 0.97

24 38 0.011 0.54 11.0 0.9 1 23 1012 1034 1012 1034 0.97

25 38 0.00049 0.025 15.2 6.0 2 23 1062 1083 1061 1083 0.97

26 38 0.0065 0.33 11.7 3.5 1 23 1089 1111 1089 1111 0.98

27 38 0.0014 0.069 13.8 0.7 1 23 1117 1139 1117 1139 0.98

28 38 0.0083 0.42 11.3 6.8 1 23 1145 1167 1145 1167 0.98

29 38 0.00043 0.022 15.4 3.4 1 23 1173 1195 1173 1195 0.98

30 38 0.23 12 6.8 7.8 1 23 1201 1223 1201 1223 0.96

31 38 0.022 1.1 10.0 4.5 1 23 1229 1251 1229 1251 0.98

32 38 4.7e-05 0.0024 18.4 2.9 1 23 1257 1279 1257 1279 0.98

33 38 0.00074 0.038 14.7 6.0 1 23 1285 1307 1285 1307 0.97

34 38 0.00015 0.0078 16.8 5.3 1 23 1313 1335 1313 1335 0.98

35 38 0.00068 0.035 14.8 3.1 1 23 1341 1363 1341 1363 0.98

36 38 0.11 5.9 7.8 3.9 1 23 1369 1391 1369 1391 0.98

37 38 0.00038 0.019 15.6 2.7 1 23 1397 1419 1397 1419 0.98

38 38 0.13 6.6 7.6 4.0 1 23 1425 1447 1425 1447 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	38	0.002	0.1	13.3	1.9	1	23	122	144	122	144	0.98
2	38	2.8	1.4e+02	3.4	1.3	1	23	146	168	146	168	0.93
3	38	5.2	2.6e+02	2.5	6.6	3	23	241	261	233	261	0.87
4	38	3.9	2e+02	2.9	2.8	1	23	288	308	288	308	0.90
5	38	1.8	91	4.0	2.2	1	23	314	337	314	337	0.96
6	38	7.1e-05	0.0036	17.9	2.2	1	23	343	365	343	365	0.98
7	38	0.00085	0.043	14.5	5.6	1	23	371	393	371	393	0.98
8	38	6.8	3.5e+02	2.2	0.4	1	12	399	410	399	412	0.85
9	38	0.00022	0.011	16.3	2.2	1	23	439	461	439	461	0.98
10	38	0.009	0.46	11.2	7.7	1	23	467	489	467	489	0.98
11	38	6.6e-05	0.0034	18.0	2.2	1	23	495	517	495	517	0.98
12	38	0.00041	0.021	15.5	2.6	1	23	523	545	523	545	0.98
13	38	0.00019	0.0097	16.5	2.0	1	23	551	573	551	573	0.98
14	38	0.00055	0.028	15.1	4.0	1	23	579	601	579	601	0.98
15	38	0.017	0.84	10.4	3.8	1	23	607	629	607	629	0.98
16	38	0.00017	0.0086	16.7	3.9	1	23	635	657	635	657	0.98
17	38	0.00012	0.0061	17.1	3.4	1	23	663	685	663	685	0.98
18	38	0.0056	0.29	11.9	4.8	1	23	691	713	691	713	0.98
19	38	0.0017	0.086	13.5	3.8	1	23	719	741	719	741	0.98
20	38	0.0021	0.11	13.2	5.4	1	23	747	769	747	769	0.98
21	38	8.4e-05	0.0043	17.6	1.1	1	23	775	797	775	797	0.98
22	38	0.0021	0.11	13.2	5.4	1	23	803	825	803	825	0.98
23	38	0.017	0.86	10.4	4.6	1	23	988	1010	988	1010	0.97
24	38	0.011	0.54	11.0	0.9	1	23	1012	1034	1012	1034	0.97
25	38	0.00049	0.025	15.2	6.0	2	23	1062	1083	1061	1083	0.97
26	38	0.0065	0.33	11.7	3.5	1	23	1089	1111	1089	1111	0.98
27	38	0.0014	0.069	13.8	0.7	1	23	1117	1139	1117	1139	0.98
28	38	0.0083	0.42	11.3	6.8	1	23	1145	1167	1145	1167	0.98
29	38	0.00043	0.022	15.4	3.4	1	23	1173	1195	1173	1195	0.98
30	38	0.23	12	6.8	7.8	1	23	1201	1223	1201	1223	0.96
31	38	0.022	1.1	10.0	4.5	1	23	1229	1251	1229	1251	0.98
32	38	4.7e-05	0.0024	18.4	2.9	1	23	1257	1279	1257	1279	0.98
33	38	0.00074	0.038	14.7	6.0	1	23	1285	1307	1285	1307	0.97
34	38	0.00015	0.0078	16.8	5.3	1	23	1313	1335	1313	1335	0.98
35	38	0.00068	0.035	14.8	3.1	1	23	1341	1363	1341	1363	0.98
36	38	0.11	5.9	7.8	3.9	1	23	1369	1391	1369	1391	0.98
37	38	0.00038	0.019	15.6	2.7	1	23	1397	1419	1397	1419	0.98
38	38	0.13	6.6	7.6	4.0	1	23	1425	1447	1425	1447	0.98

Sequence Information

Coding Sequence: ATGGCAGAAACCACAACATCTTGTCAAATTTGTCTAAAGGAAATCAGGGAAGGAACTCTACTTCATTCCCTAAACAACGACCTTTCTATCTTTCCTATAAAACCAgATTTCACCATCGATCAAAACCCACTTGTGTGTAAAGAATGCAAGATCAAAATTGACGAAGATTATCAAGCTCTCGTgcgaaatcaaaatattttaaaaactgaaaatctaTCATTTTCTTCGGTTAGTgaagaaaatttcttaaaaacaatcgaaGATGACTTTGACGAAGTTGCAGCTCGAAACGAAAATATGGTAAAAGATGAATATGTGTTATTTAACACGGATATGTTAATCTGCTTGGAAGTATCTGCATCGTACTACTGCCAGCAATGTAATTATGCTACTagcgataaacaaaaattaagagatCACATATTTACTCACCAATATAAATGCGATCTCTGCAGTTACACTACGTTTGTCGATTTCTCATTAAAGGAACACAAAGAATTACATTCTAATAGTCGTATCCAAACTGCTTTGTCTCTGCACAGTAGAATACGTactcaacaaaatcaaaataaaacaatcgaaGATGAGTTTGATGAAGTTGCAATTCAAAGTGAAAATATGGTAAAAGAcgaatatttgttatttaacgtCGATATACCCATCGCCATGGAAGAATCGGCATCGTCTGATACTTCCTATTACTGCCATCAATGTACTTTTTGCAGTCTGTGCAGTTACACTACGTTTGACCAGTCTTCATTGGACAAACACAAAGAAGTACATGCTAATAATTTATACGACAGGAGTCGCATCCAAACTGCTTTGCCTCGGCACAATAGTTTACGCACTCAAGAGAAACGGTTTCAATGTAATTTATGTGAGCATCGCAGCAGTACATCTCTAAAGCAGCACATGTCCATACATTCTGGGAAGAAACCTTTCAGCTGTGATAAATGCGACTTGACCGATGTTTGCAGCAAAAAGGATTTATCTGTGCACAATAGAACACACactaaagaaaaaccgtttaaatgtaatatttgtgAGCATCGTAGCAGTACATCCGGTAATCTGAAACAGCACATGTCCATACATTCTGGGAAGAAACCTTTCAGCTGTGATAAGTGCAACTACAGGTGTTCCAGGAAAAAGGATTTAACTGTGCACAATAGAACACACactcaagaaaaaccgtttaagtgTAATATTTGTGAGCATCGTAGCAGTACATCCGttgtgataagtgcgactatAGGTGTTCCAGGAAAAAAGGATTTATCTGTGCACAATAGAACACACACTCAAAAGAAACGGTTTCAATGTAATTTATGTGAGCATCGCAGCAGTACATCCGGTAATCTAAAGCAGCACATGTCCATACATTCTGGGAAGAAACCTTTCAGCTGTGATAAATGCGACTACCGATGTTGCAGCAAAAAGAATTTGTCTGTGCACAATAGAACACACactcaagaaaaaccgtttaagtgTAATATTTGTGAGCATCGCAGCAGTACATCGGGTAATCTGAAACAGCACATGTCCGTACATTCTGGGAAGAAACCTTTCAGCTGTGATAAATGCGACTACCGAAGTTCCACCAAAAAGAATTTATCTGTGCACAATAGAACACACactcaagaaaaaccgtttaagtgTAATATTTGTGAGCATCGCAGCAGTACATTAGGTAATCTGAAAACGCACATGTCAATACATTCTGAGAAGAAACCTTTCAGTTGTGATAAGTGCGACTTCAGGTGTTCCAACAAGGGTAATTTATCTCGGCACAATAGAATACACACTCAACATAAACCGTTTAAGTGTGATTTATGTGATTATTGCAGTGGGAAATCCGGCGACTTTAAAAACCATATGTACAAACATTCTGGGGAAAAACCTTTCAGCTGTGATGAGTGCGACTACAGGTGTTCCAGGAAAAAGGATTTAACTGTGCACAATAGAACACACactcaagaaaaaccgtttaagtgTAATATTTGTGAGCATCGTAGCAGTACATCCGGTAATCTGAAACAGCACATGTCCAAACATTCTGGGAATAAACCTTTCAGttgtgataagtgcgactatAGGTGttccaacaaaaattatttatctcaGCACAATAGGATCCACACTCAACAAAAAccgtttaagtgtaatttatgtGATTATTGCAGCAGGATATCCGGCGACTTGAAACGGCATATGTACAAACATTCTGGGGCGAAACCGTTCAGCTGTGATAAGTGCAACTACAGGTGTTCCCGGAAAAAGGATTTATCTGTGCACAATAGAACACACactaaagaaaaaccgtttaaatgtaatatttgtgATTATCGCAGCAGCATGTCTGGCAACTTGAAAACGCACATGTACATACATTCTGGGGAGAAACCTTTCAGCTGTGATAAGTGCAACTACAGGTGTTCCAGGAAAAAGGATTTATCTGTGCACAATAGAACACACactcaagaaaaaccgtttaaatgtaattatGTAGAAGAGCCACAGCGACGTTTTTATTTACTCACTGTTGTCCGATTGGAAGgcataagaataaaaaaaaataaaagaaattgtgcATTAATTATGGCAGAAACTACAATATCTTGTCGAAtatgtttaaaagaaataagggAAGGAACACTACTTCATTCCGTAAACAACGACCCTAATAAGTTGTCGACCTTTCCTGTAAAAACAGAATTGAACGACGATGAACACCCACTTGTGTGCAACGAATGCAACCTCAAAACTGTTGAAGATCgccaaaatgaaatcattttaaaaaccgaaaatCTACCACAAACGACAAACTCCGCTGTACTTGTTAGTGaagaaatattcttaaaaacaatcaaagatGAGCTTGTTGAAGTGGCCGTTAAAAATGAATGTATGGTAAAAGAAGAATACGATATGCCAGTCTGGGTGGAAGAATCTGGCATTTCGTACTACTGCCAGCAATGTAACTACGCAACttgtaataaacaaacattaacCAATCACATATTTAGTCACCAATATAAATGCGATATGTGTAGTTACGCCACATTTGATAAATACTCATTGGACAAGCACCAGGAAGcacactttaatattaaatattatacgtATCGTAGCAAAACTGCTTTGCCTAGACACAATAGAATGCGCGctcaaaaaaaactgttaaaatgtagtttttgtgattattgcagcagTAAATCCAGCCACCTAAAAAGGCATATGCTCATACATTCCGGGGTAAAATCTTACAGCTGTGACAAGTGCGATTACAAATGTTATGATAAATATGGTTTAACTCTTCACAATAGAATACACactcaagaaaaaccgtttaagtgTAATCTTTGTGATTATTCCAGCAATGTATCCGGCGCCTTGAAAATGCATATGTACAAACATTCGGGGGAGAAACCTTACAGCtgtgacaagtgcgactacagaTGTTGCAGAAAAAGTTCATTGTCTCTGCACAATAGAATACACGCTcaagaaaaaccttttaaatgtaCTATTTGTGATTATCGGAGCAATCAAGCCGTCCATTTAAAAACGCACATGTATAAACATTCTGGGGAGAAACCTTTCAGGtgtgataagtgcgactacagGTGTTACAAGAAAAGTGATTTATCCCAGCATTGTAGAATACACACtcaagaaaaaccatttaagtgtagtttttgtgatttttgcaGCAGTTACGCAAATCTATTGAAAATACACATGTACAAGCATTACGGGGAGAAACCTTACAGCtgtgacaagtgcgactacCGGTTTTGCAACAAAAGTGCTTTGGCTCAGCACAATAGAGTGCACactaaagaaaaaccgtttatgTGTAATTTTTGCGGTTATTGTAGCAGCAGTAAATACCAATTGAAAACGCACATGTATAAACATTCTGGGGAGAGACCTTTCAGTTGTGATAAGTGTAACTACAGGTGTAGCAAGAAAAGTGATTTATCTCGGCACGTGAGAACGCACACTCAAGAAAAACcctttaaatgtaatttttgtgattattgcggGAATCGCGCGGCCGACCTGAAAACGCACATGTTCACCCATTCTGGGGAGAAACCTTTCAGttgcgacaagtgcgactacagaTGTTACCTCAAAAGTGTTTTATCTCGACACAATAGAATACACACTcaagaaaaaccttttaaatgtaatttttgtgattattgcggGAATCGTGCGGGCGACCTAAAAACGCACATGTTGAAACATTCTGGGGAGAAACCATTCAGttgtgataagtgcgactacaaatGTTATCTCAAAAGTGTTTTATCTCGGCACAATAGGGTGCACACCCAAACCgtttaa
Protein Sequence: MAETTTSCQICLKEIREGTLLHSLNNDLSIFPIKPDFTIDQNPLVCKECKIKIDEDYQALVRNQNILKTENLSFSSVSEENFLKTIEDDFDEVAARNENMVKDEYVLFNTDMLICLEVSASYYCQQCNYATSDKQKLRDHIFTHQYKCDLCSYTTFVDFSLKEHKELHSNSRIQTALSLHSRIRTQQNQNKTIEDEFDEVAIQSENMVKDEYLLFNVDIPIAMEESASSDTSYYCHQCTFCSLCSYTTFDQSSLDKHKEVHANNLYDRSRIQTALPRHNSLRTQEKRFQCNLCEHRSSTSLKQHMSIHSGKKPFSCDKCDLTDVCSKKDLSVHNRTHTKEKPFKCNICEHRSSTSGNLKQHMSIHSGKKPFSCDKCNYRCSRKKDLTVHNRTHTQEKPFKCNICEHRSSTSVVISATIGVPGKKDLSVHNRTHTQKKRFQCNLCEHRSSTSGNLKQHMSIHSGKKPFSCDKCDYRCCSKKNLSVHNRTHTQEKPFKCNICEHRSSTSGNLKQHMSVHSGKKPFSCDKCDYRSSTKKNLSVHNRTHTQEKPFKCNICEHRSSTLGNLKTHMSIHSEKKPFSCDKCDFRCSNKGNLSRHNRIHTQHKPFKCDLCDYCSGKSGDFKNHMYKHSGEKPFSCDECDYRCSRKKDLTVHNRTHTQEKPFKCNICEHRSSTSGNLKQHMSKHSGNKPFSCDKCDYRCSNKNYLSQHNRIHTQQKPFKCNLCDYCSRISGDLKRHMYKHSGAKPFSCDKCNYRCSRKKDLSVHNRTHTKEKPFKCNICDYRSSMSGNLKTHMYIHSGEKPFSCDKCNYRCSRKKDLSVHNRTHTQEKPFKCNYVEEPQRRFYLLTVVRLEGIRIKKNKRNCALIMAETTISCRICLKEIREGTLLHSVNNDPNKLSTFPVKTELNDDEHPLVCNECNLKTVEDRQNEIILKTENLPQTTNSAVLVSEEIFLKTIKDELVEVAVKNECMVKEEYDMPVWVEESGISYYCQQCNYATCNKQTLTNHIFSHQYKCDMCSYATFDKYSLDKHQEAHFNIKYYTYRSKTALPRHNRMRAQKKLLKCSFCDYCSSKSSHLKRHMLIHSGVKSYSCDKCDYKCYDKYGLTLHNRIHTQEKPFKCNLCDYSSNVSGALKMHMYKHSGEKPYSCDKCDYRCCRKSSLSLHNRIHAQEKPFKCTICDYRSNQAVHLKTHMYKHSGEKPFRCDKCDYRCYKKSDLSQHCRIHTQEKPFKCSFCDFCSSYANLLKIHMYKHYGEKPYSCDKCDYRFCNKSALAQHNRVHTKEKPFMCNFCGYCSSSKYQLKTHMYKHSGERPFSCDKCNYRCSKKSDLSRHVRTHTQEKPFKCNFCDYCGNRAADLKTHMFTHSGEKPFSCDKCDYRCYLKSVLSRHNRIHTQEKPFKCNFCDYCGNRAGDLKTHMLKHSGEKPFSCDKCDYKCYLKSVLSRHNRVHTQTV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -