Basic Information

Insect: Abscondita terminalis
Gene Symbol: -
Assembly: GCA_013368085.1
Location: JABVZW010001374.1:367473-372902[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.00035 0.018 15.7 2.5 1 23 159 181 159 181 0.99

2 24 0.074 3.8 8.4 0.5 1 23 187 210 187 210 0.88

3 24 1.1e-05 0.00058 20.3 0.4 1 23 215 237 215 237 0.98

4 24 5.1e-06 0.00026 21.4 1.4 1 23 247 269 247 269 0.98

5 24 7.9e-05 0.004 17.7 2.1 3 23 275 295 273 295 0.97

6 24 1.9e-06 9.9e-05 22.8 4.1 1 23 301 323 301 323 0.99

7 24 3.5e-06 0.00018 22.0 0.5 1 22 329 350 329 350 0.96

8 24 0.03 1.5 9.6 0.1 2 23 358 379 357 379 0.95

9 24 0.00031 0.016 15.9 1.5 1 23 383 406 383 406 0.93

10 24 0.00032 0.016 15.8 1.9 1 23 412 434 412 434 0.98

11 24 0.21 11 6.9 4.3 1 23 440 463 440 463 0.93

12 24 0.0015 0.077 13.7 1.2 1 23 468 490 468 490 0.98

13 24 0.0067 0.34 11.6 1.4 2 23 514 535 513 535 0.95

14 24 5.7e-05 0.0029 18.2 1.2 1 23 541 564 541 564 0.98

15 24 0.0017 0.088 13.5 0.1 1 23 568 590 568 590 0.97

16 24 0.15 7.7 7.4 0.1 1 23 596 619 596 619 0.93

17 24 0.00089 0.045 14.4 0.2 1 23 630 653 630 653 0.97

18 24 2.6e-05 0.0013 19.2 4.9 1 23 657 679 657 679 0.99

19 24 0.27 14 6.6 4.4 1 23 699 722 699 722 0.98

20 24 0.0039 0.2 12.4 2.4 1 23 731 753 731 753 0.97

21 24 0.00073 0.037 14.7 0.2 2 23 758 779 757 779 0.96

22 24 2.4e-05 0.0012 19.3 0.7 1 23 785 807 785 807 0.99

23 24 0.00046 0.023 15.3 7.1 1 23 813 835 813 835 0.98

24 24 0.00056 0.028 15.0 0.5 1 23 841 864 841 864 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.00035	0.018	15.7	2.5	1	23	159	181	159	181	0.99
2	24	0.074	3.8	8.4	0.5	1	23	187	210	187	210	0.88
3	24	1.1e-05	0.00058	20.3	0.4	1	23	215	237	215	237	0.98
4	24	5.1e-06	0.00026	21.4	1.4	1	23	247	269	247	269	0.98
5	24	7.9e-05	0.004	17.7	2.1	3	23	275	295	273	295	0.97
6	24	1.9e-06	9.9e-05	22.8	4.1	1	23	301	323	301	323	0.99
7	24	3.5e-06	0.00018	22.0	0.5	1	22	329	350	329	350	0.96
8	24	0.03	1.5	9.6	0.1	2	23	358	379	357	379	0.95
9	24	0.00031	0.016	15.9	1.5	1	23	383	406	383	406	0.93
10	24	0.00032	0.016	15.8	1.9	1	23	412	434	412	434	0.98
11	24	0.21	11	6.9	4.3	1	23	440	463	440	463	0.93
12	24	0.0015	0.077	13.7	1.2	1	23	468	490	468	490	0.98
13	24	0.0067	0.34	11.6	1.4	2	23	514	535	513	535	0.95
14	24	5.7e-05	0.0029	18.2	1.2	1	23	541	564	541	564	0.98
15	24	0.0017	0.088	13.5	0.1	1	23	568	590	568	590	0.97
16	24	0.15	7.7	7.4	0.1	1	23	596	619	596	619	0.93
17	24	0.00089	0.045	14.4	0.2	1	23	630	653	630	653	0.97
18	24	2.6e-05	0.0013	19.2	4.9	1	23	657	679	657	679	0.99
19	24	0.27	14	6.6	4.4	1	23	699	722	699	722	0.98
20	24	0.0039	0.2	12.4	2.4	1	23	731	753	731	753	0.97
21	24	0.00073	0.037	14.7	0.2	2	23	758	779	757	779	0.96
22	24	2.4e-05	0.0012	19.3	0.7	1	23	785	807	785	807	0.99
23	24	0.00046	0.023	15.3	7.1	1	23	813	835	813	835	0.98
24	24	0.00056	0.028	15.0	0.5	1	23	841	864	841	864	0.96

Sequence Information

Coding Sequence: ATGCTATTCCTGGGCTATGGACAGCAAACCATGAAAGCTGACTTGGACTGTAACTTAACAGAAAATGCGTACTTAAGAGCACCCTCCAACGAAGCGGACGTCAGTTTTGCGTTCCGTTCATGCGAGCTGATCTACTGGAAACagatcaaaattttatctttctaTGTCCCCtcaattaccatttttttaagtgGTATAACAAGCTCTGTCATCGCCACTATCTTACCATCAGCCGCAAACGTTAACATTCCAATTGCTTTGGTGGCAAACTCTAAGCTCAACGAAAGTGATCTATTCAACCTTATCAGCAAATTCTTACCAAAACATGAAGATTTCAAATCTGTAAACCCAAAAGAATTTTTGAGTCAAGAATCTGATACAAGTCGATCACTTAATTCTTGTCCGGTTTTTGCGTGTTACAGAAAAGGCGCACTTACTGGTCACATCAAATACATGCACGAAAACAAAGAATGGTTTCAATGCGAGGTGTGCCATAAAAGTTTTctcatcaaacaaaatttgatacagCATATGAACCGGCATGAAAAGAAATACGCGTTCAAGTGTCAGTTATGCCCGAGAGAATTTTACACGAATGCCGAAGTCAAATTTCACGTTTTGAGGGTACACCAAAATGTGATGTACGATTGTGATATTTGCGGCAAACCTCTCGCCACGAAGTACTCTTTGAATCAACACAAGAAAACTCACGAAGTCATTCAAAAATCGGAACAAAGGTTTACATGCGAGGTGTGCGGAAAGATTTTTCCGCACCAGCGTAGGTTGAATCAGCATTTAAGAATTCACGGAGACGATGTGATCTGTCACCTTTGCGGCAAATGTCTTACGACTAAAAAAGGTTTGATCGAACATCTGAGGGTGCACAACAACGAGAAACCTTACAAATGCGACACGTGTGGGAAGAGTTTTACGAAACTGCATTCATTGACTGTACATCGACGATCGCATCTTGGTGTGAAACCTCACCGTTGTGAAACGTGCGGAAAGTCTTTTAGTCAAAGATCGCCTTTGGTTATTCACATGAGGTCCACCGATTTGCGATTTGCAAATCAATGCGAAATTTGCTTAAGAATATTTCCTACCAAATGGGCCGTCACCAAACATAAAGTGATCCATATCGGTGAATTTTCTTGCCGCATATGCGATATgaaatttaagaagaaatatttgttaaattatcacATGGACGATGTccaccaagaaaaaaattgttatcgttgcgaaatttgtaacaaaaccaTGTCTACGAAACAAACTCTGAGGTTACATTTGAGTCGccatcaaaaaaagttttcatttcacTGCCAGTTATGCCAAAAGAAGTATTGTACGTATAATGACGTTAAAGCTCACGTCGTGAGGGTGCACGAGAACGCAGTCTACGAATGTTGCATTTGCAAACGccctttttcttctaaatatgCTGCAGCCGATCACGAAAAAACGCACAACTCAGTTCGACGGACATCTGGACAATCAGAACGGGGGTTTAAgACCGGTTCCGTTATAGGAAGAAATCAATGCGACGTttgctttaaaacatttttcaaacctTCCCGCTTGAGGAGTCATAAAGTAATTCACGCCGATGAGAAACCATTTACTTGTGATCTATGCTCGGCTTCGTTTAAAAGGAACAACGCTTTGTACACTCACATGAAAAAAGTACACCAAATGATTTATAGTTGCGAAGAATGCAAAATAGTCGTCAGTTCGAACCTTGCTTTGAAGATTCACATGAACTTTCATACTAAGAAGTTTGTGTACGAGTGTTTGTTGTGTGAAAATCCATTTTACACGAAAGACGACGCCGTAAAACACCTTTTAGACGCTCACGAAAAGGATGAGTTCGAACCAAATGTTGCTTACAAATGTAATGTTTGTGGAAAGTATCTTGCTTCGGGACGAACTTTGACCGAACACATGAAGGAAGTACATCCAGACGAATATCGATGCAAACATTGCAACGAAATCTTCAGTTCGAATAAATTCCTGAAAGAGCATATGAAAAGTCATTCAAACACCGAGAATGGGGCTAAAAAACAACCTGGTCGACTTAATCAAACTAAGCtgtacaaatgtaaattttgccGAAAGAATCTTGATTCAATCTGTACTTTGGCCGATCATCAAAAAACATTTCACCCAAACGAAGTTGATCATTCGAAGCACGAATGCGGGGTGTGCGGTAAACTTTTGGCAAACAAGAGTTCATTACACACACATAAGCAATCGCATGGAGATAAATTGATCTGCCACATTTGTGGCAAGCCTTTAGCAAGCAAGTTGGGTCTGACCGAGCACTTACGATTGCACGACAACGTGAAACCTTATCAATGCGAAGTTTGTGGCAGGCGTTTTACTAAACTTAGCAATTTGGGCCCACACCGTCGCACTCACTATCAAGCGAAGATTCATAAATGTACCCTTTGCGAGAAGGCTTTCAGTCAAAAATGTACTTTGGTGATTCACATGAGGCATCACAGTGGCGAGAAACCATTTAAATGCGGGTTGTGCGATAGCGCTTTTATCAGCAGCTCCTTGCTTAGAAATCACAGCAAGGTTAAGCATTGTTTGTtttag
Protein Sequence: MLFLGYGQQTMKADLDCNLTENAYLRAPSNEADVSFAFRSCELIYWKQIKILSFYVPSITIFLSGITSSVIATILPSAANVNIPIALVANSKLNESDLFNLISKFLPKHEDFKSVNPKEFLSQESDTSRSLNSCPVFACYRKGALTGHIKYMHENKEWFQCEVCHKSFLIKQNLIQHMNRHEKKYAFKCQLCPREFYTNAEVKFHVLRVHQNVMYDCDICGKPLATKYSLNQHKKTHEVIQKSEQRFTCEVCGKIFPHQRRLNQHLRIHGDDVICHLCGKCLTTKKGLIEHLRVHNNEKPYKCDTCGKSFTKLHSLTVHRRSHLGVKPHRCETCGKSFSQRSPLVIHMRSTDLRFANQCEICLRIFPTKWAVTKHKVIHIGEFSCRICDMKFKKKYLLNYHMDDVHQEKNCYRCEICNKTMSTKQTLRLHLSRHQKKFSFHCQLCQKKYCTYNDVKAHVVRVHENAVYECCICKRPFSSKYAAADHEKTHNSVRRTSGQSERGFKTGSVIGRNQCDVCFKTFFKPSRLRSHKVIHADEKPFTCDLCSASFKRNNALYTHMKKVHQMIYSCEECKIVVSSNLALKIHMNFHTKKFVYECLLCENPFYTKDDAVKHLLDAHEKDEFEPNVAYKCNVCGKYLASGRTLTEHMKEVHPDEYRCKHCNEIFSSNKFLKEHMKSHSNTENGAKKQPGRLNQTKLYKCKFCRKNLDSICTLADHQKTFHPNEVDHSKHECGVCGKLLANKSSLHTHKQSHGDKLICHICGKPLASKLGLTEHLRLHDNVKPYQCEVCGRRFTKLSNLGPHRRTHYQAKIHKCTLCEKAFSQKCTLVIHMRHHSGEKPFKCGLCDSAFISSSLLRNHSKVKHCLF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -