Ater014094.1


Basic Information
Transcription Factor Domain
Sequence Information
Similar Transcription Factors

Basic Information

Insect
Abscondita terminalis
Gene Symbol
ZFY_2
Assembly
GCA_013368085.1
Location
JABVZW010002587.1:38096-40887[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.0094 0.48 11.2 0.8 2 23 91 112 90 112 0.93
2 25 4.5e-05 0.0023 18.5 0.8 1 23 114 136 114 136 0.97
3 25 0.0013 0.068 13.8 2.7 1 22 151 172 151 172 0.95
4 25 3.6e-05 0.0018 18.8 1.3 2 23 230 251 229 251 0.97
5 25 0.016 0.81 10.5 0.2 1 23 257 279 257 279 0.96
6 25 8.9e-05 0.0045 17.5 1.4 1 23 285 307 285 307 0.99
7 25 0.0042 0.21 12.3 3.3 1 23 313 335 313 335 0.98
8 25 3.8e-05 0.0019 18.7 1.5 1 23 341 363 341 363 0.99
9 25 3.2e-05 0.0016 19.0 0.9 1 23 397 419 397 419 0.98
10 25 0.016 0.81 10.5 0.2 1 23 425 447 425 447 0.96
11 25 2.8e-05 0.0014 19.1 2.6 1 23 453 475 453 475 0.99
12 25 0.013 0.65 10.7 2.3 1 23 481 503 481 503 0.97
13 25 3.9e-05 0.002 18.7 2.3 1 23 509 531 509 531 0.99
14 25 0.00087 0.044 14.4 2.5 1 23 537 559 537 559 0.98
15 25 4.1e-05 0.0021 18.6 2.7 1 23 565 587 565 587 0.99
16 25 6.2e-05 0.0032 18.0 2.6 1 23 615 637 615 637 0.99
17 25 0.04 2 9.2 1.5 1 23 643 665 643 665 0.97
18 25 6.3e-05 0.0032 18.0 4.4 1 23 671 693 671 693 0.98
19 25 0.0012 0.061 14.0 2.2 1 23 699 721 699 721 0.98
20 25 4.1e-05 0.0021 18.6 2.7 1 23 727 749 727 749 0.99
21 25 0.00011 0.0057 17.2 1.7 1 23 777 799 777 799 0.99
22 25 0.0099 0.5 11.1 2.4 1 23 805 827 805 827 0.97
23 25 3.9e-05 0.002 18.7 2.3 1 23 833 855 833 855 0.99
24 25 0.0011 0.056 14.1 2.6 1 23 861 883 861 883 0.98
25 25 2.2e-05 0.0011 19.4 2.0 1 23 889 911 889 911 0.99

Sequence Information

Coding Sequence
ATGAGTGAATTCACAACTACGTGCGCAGTTTGTTCAGGAATAATTAAGCAAAAAGCGAAGGTTGAAATAGACGATGTGTTACCGAACTCCAAGTTGGAATTGGAAGACgaTTTAAGCGTCACCGAAAACCAACTCGCCTGCAATCAATGCATGACCGAAATTGGCTATCCGAATGTTGTTAAAGAAGAGTTTGACGAAGCTTCCATCAAGACCGAAGAAATTGATTTGTCATTTGTACGTGTTGAAGAGAACATTTCGCTAAATATTCTGTACTGTTATTACTGTAATTACGGCACTAACGACAAACGAAATCTTACGGATCATATTTTCGATCACCGTTTCAAATGTAACGAATGCAATCGCACAACTTCCGATagttctttattaataattcataaacAGCTTCACACATTTAATGGATCGTCTGTAAATGAAGAGTTATCAGAAGTATTCAATTGTCACGATTGTGTTTATAAAacgaacaacaaaattaatttaaaacgtcaCATGAAGAAGTGTTTAAAACAAAGGAAGTGTACAACACCGACACACACTCGAGGTTTGTGCGATTATCGAAATAAGAATTTGAACGATTTAAAAATCCACACTGGCGAGAGTCACTATTTCTGTGACAATTGTAACCATAAGATGTACATCGAAAGTCTGCTGACGGAGGAAGAATCATTGAAGTGCGATTTGTGTGATTATACCACTAAATACTCGAGTAACTTAAAAGTGCACTTGAATAAACATTCGGATGCACATAGTTTTGCTTGCAacaaatgcgactacaaaacgTATATCAAAGGTAATTTAGCGATTCACCAAGTAGTTCATTCGGAAAAAGAACCATTTAAATGTGATTTGTGCGATTTTACCAGTAATTACTCGGGTAACTTAAAAGTGCACTTGAGAAAACATTCGAGCGAAAGGAATTTTAGTTGTGACAAGTGCGATTATAAGACTTACACCAAATTCATGTTGACAAGTCACACAAAAGttcatttcgaaaaaaaatcctTTAAGTGCGATTTGTGTGATTTCACCAGTAAACGCTCGGGTAACTTAAAAGTGCACTTGAATAAACATTCGGGCggaaataattttagttgtgaCAAGAGCGATTATAAATCGTACACCAAATTCATGTTGACAAGTCGCGCAAATGTTCATTTCGGTAAAGAATTGTTTAAGTGCGATTTGTGTGATTATACCAGTAAACGTTTGGGTGATTTAAGAAACCACATGATTAAACATTCGGATGCACATAGTTTTGCTTGCAacaaatgcgactacaaaacgTATATCAAAGGTAATTTAGCGATTCACCAAGTAGTTCATTCGGaaagaaaaccatttaaatgcacTTTGTGCGATTATACCAGCAAGTACTCGAGTAATTTAAAAGTGCACTTGAATAAACATTCGGGCGGAAACAATTTTAGTTGTGACAAATGCGACTACAAGACGTACTCCAAATTTATGTTGACGAGTCACAAAATAGTTCATTCGGGAAAGGAACCATTTAAGTGTGATTTGTGTGATTTTACCACTAAATACTCGAGTAACTTAAAAGTGCACTTGAATAAACATTCGGGCGGAAATAATTTTCGTtgtgacaagtgcgactacaagaCTTACAGCAAATCCATGTTGATAAGtcacaaaaaagttcatttcgAACATTTCGCGTTTAAGTGCGATTTTTGTGATTATACCAGTAAATACTCGAGCAATTTAAAAGTGCACTTGAATAGACATTCGGGTGGAAATCATTTTAATTGTGACAAGTCCGAGTGCACTTTAACAAAGTACAGAAAAGTTTATTCGGAAAAAGAACAATTCAAGTGCGATTTGTGTGATTTTACTAGTAAATACTCGAGCAACTTGAAAGTTCACTTGAAAAAACATTCGAgcgaaaagaattttaattgcgACAACTGCGACTACAAGGCGTACACAAAATTCATGTTGATAAGtcacaaaaaagttcatttcgATAAAGGATTATTTAAGTGTGATTTGTGCGACTATACCTGTAAATACTCGAGTAACTTAAAAGTGCACTTGAGTAAACATTCGGgtggaaataattttagttgtgaCAAATGCGACTACAAGACTTACAGCAAATCCATGTTGATAAGtcacaaaaaagttcatttcgAACATTTCGCGTTTAAGTGCGATTTTTGTGATTATACCAGTAAATACTCGAGCAATTTAAAAGTGCACTTGAATAGACATTCGGGTGGAAATCATTTTAATTGTGACAAGTCCGAGTGCACTTTAACAAAGTACAGAAAAGTTTATTCGGAAAAAGAACAATTCAAGTGTGATTTGTGTGATTTTTCTAGTAAGTACTCGGGTAACTTGAAAGTGCACTTGAAAAAACATGCGAATGAAAGGAATTTTAGTTGTGACAAATGcgactacaagacgtacaccaAATTCATGTTGACAAGTCACAAAATAGTTCATTCGGAAAAGGAACCATTTAAATGTGATTTGTGTGATTTTACCACTAAATACTCGAGTAACTTAAAAGTGCACTTGAATAAACATTCGGGCggaaataattttagttgtaacaagtgcgactacaagaCTTACAGCAAATCCATGTTGATAAGtcacaaaaaagttcatttcgaaaaaaaatcctTTAAGTGCGATTTGTGTGATTATACTAGTAAATATTCGAGTAACTTAAAAGTGCACTTAAATAAACATTCTGATTGA
Protein Sequence
MSEFTTTCAVCSGIIKQKAKVEIDDVLPNSKLELEDDLSVTENQLACNQCMTEIGYPNVVKEEFDEASIKTEEIDLSFVRVEENISLNILYCYYCNYGTNDKRNLTDHIFDHRFKCNECNRTTSDSSLLIIHKQLHTFNGSSVNEELSEVFNCHDCVYKTNNKINLKRHMKKCLKQRKCTTPTHTRGLCDYRNKNLNDLKIHTGESHYFCDNCNHKMYIESLLTEEESLKCDLCDYTTKYSSNLKVHLNKHSDAHSFACNKCDYKTYIKGNLAIHQVVHSEKEPFKCDLCDFTSNYSGNLKVHLRKHSSERNFSCDKCDYKTYTKFMLTSHTKVHFEKKSFKCDLCDFTSKRSGNLKVHLNKHSGGNNFSCDKSDYKSYTKFMLTSRANVHFGKELFKCDLCDYTSKRLGDLRNHMIKHSDAHSFACNKCDYKTYIKGNLAIHQVVHSERKPFKCTLCDYTSKYSSNLKVHLNKHSGGNNFSCDKCDYKTYSKFMLTSHKIVHSGKEPFKCDLCDFTTKYSSNLKVHLNKHSGGNNFRCDKCDYKTYSKSMLISHKKVHFEHFAFKCDFCDYTSKYSSNLKVHLNRHSGGNHFNCDKSECTLTKYRKVYSEKEQFKCDLCDFTSKYSSNLKVHLKKHSSEKNFNCDNCDYKAYTKFMLISHKKVHFDKGLFKCDLCDYTCKYSSNLKVHLSKHSGGNNFSCDKCDYKTYSKSMLISHKKVHFEHFAFKCDFCDYTSKYSSNLKVHLNRHSGGNHFNCDKSECTLTKYRKVYSEKEQFKCDLCDFSSKYSGNLKVHLKKHANERNFSCDKCDYKTYTKFMLTSHKIVHSEKEPFKCDLCDFTTKYSSNLKVHLNKHSGGNNFSCNKCDYKTYSKSMLISHKKVHFEKKSFKCDLCDYTSKYSSNLKVHLNKHSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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