Basic Information

Insect: Abscondita terminalis
Gene Symbol: ATbp_1
Assembly: GCA_013368085.1
Location: JABVZW010001374.1:376719-383583[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.01 0.52 11.1 1.8 2 23 25 46 24 46 0.96

2 25 1.3e-05 0.00067 20.2 0.6 1 23 52 75 52 75 0.97

3 25 0.018 0.9 10.3 0.2 1 23 79 101 79 101 0.97

4 25 1.2 60 4.6 0.1 1 23 107 130 107 130 0.93

5 25 0.0027 0.14 12.9 0.3 1 23 141 164 141 164 0.96

6 25 0.0003 0.015 15.9 4.7 1 23 168 190 168 190 0.98

7 25 0.065 3.3 8.5 4.4 1 23 207 230 207 230 0.98

8 25 0.082 4.2 8.2 1.5 2 23 262 284 261 284 0.97

9 25 0.001 0.052 14.2 1.1 1 23 294 316 294 316 0.97

10 25 0.00068 0.035 14.8 0.2 2 23 321 342 320 342 0.96

11 25 2.2e-05 0.0011 19.4 0.7 1 23 348 370 348 370 0.99

12 25 0.00046 0.024 15.3 6.9 1 23 376 398 376 398 0.98

13 25 0.00025 0.013 16.1 1.8 1 22 404 425 404 433 0.95

14 25 1.9e-05 0.00096 19.7 3.1 1 23 439 461 439 461 0.99

15 25 2.9e-05 0.0015 19.1 1.2 1 21 467 487 467 488 0.96

16 25 0.0002 0.01 16.5 3.2 2 23 498 519 497 519 0.98

17 25 0.0001 0.0052 17.3 0.6 1 23 525 548 525 548 0.96

18 25 0.00027 0.014 16.0 0.8 2 23 555 576 555 576 0.98

19 25 0.00059 0.03 15.0 1.2 1 23 582 605 582 605 0.96

20 25 2.2e-05 0.0011 19.4 0.4 1 23 610 632 610 632 0.98

21 25 3.3e-05 0.0017 18.9 0.8 2 23 643 664 642 664 0.97

22 25 0.032 1.6 9.5 0.2 2 23 669 690 668 690 0.95

23 25 9.1e-05 0.0046 17.5 3.8 1 21 696 716 696 718 0.95

24 25 2.7e-08 1.4e-06 28.6 0.7 1 23 724 746 724 746 0.99

25 25 3e-05 0.0015 19.0 0.6 1 23 752 775 752 775 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.01	0.52	11.1	1.8	2	23	25	46	24	46	0.96
2	25	1.3e-05	0.00067	20.2	0.6	1	23	52	75	52	75	0.97
3	25	0.018	0.9	10.3	0.2	1	23	79	101	79	101	0.97
4	25	1.2	60	4.6	0.1	1	23	107	130	107	130	0.93
5	25	0.0027	0.14	12.9	0.3	1	23	141	164	141	164	0.96
6	25	0.0003	0.015	15.9	4.7	1	23	168	190	168	190	0.98
7	25	0.065	3.3	8.5	4.4	1	23	207	230	207	230	0.98
8	25	0.082	4.2	8.2	1.5	2	23	262	284	261	284	0.97
9	25	0.001	0.052	14.2	1.1	1	23	294	316	294	316	0.97
10	25	0.00068	0.035	14.8	0.2	2	23	321	342	320	342	0.96
11	25	2.2e-05	0.0011	19.4	0.7	1	23	348	370	348	370	0.99
12	25	0.00046	0.024	15.3	6.9	1	23	376	398	376	398	0.98
13	25	0.00025	0.013	16.1	1.8	1	22	404	425	404	433	0.95
14	25	1.9e-05	0.00096	19.7	3.1	1	23	439	461	439	461	0.99
15	25	2.9e-05	0.0015	19.1	1.2	1	21	467	487	467	488	0.96
16	25	0.0002	0.01	16.5	3.2	2	23	498	519	497	519	0.98
17	25	0.0001	0.0052	17.3	0.6	1	23	525	548	525	548	0.96
18	25	0.00027	0.014	16.0	0.8	2	23	555	576	555	576	0.98
19	25	0.00059	0.03	15.0	1.2	1	23	582	605	582	605	0.96
20	25	2.2e-05	0.0011	19.4	0.4	1	23	610	632	610	632	0.98
21	25	3.3e-05	0.0017	18.9	0.8	2	23	643	664	642	664	0.97
22	25	0.032	1.6	9.5	0.2	2	23	669	690	668	690	0.95
23	25	9.1e-05	0.0046	17.5	3.8	1	21	696	716	696	718	0.95
24	25	2.7e-08	1.4e-06	28.6	0.7	1	23	724	746	724	746	0.99
25	25	3e-05	0.0015	19.0	0.6	1	23	752	775	752	775	0.98

Sequence Information

Coding Sequence: ATGGAAGCAGGCGTGCTAAAGATGGGAAAAGGACACACGAATACGACgACCGGTTCCGTTATAGGAAGAAATCAATGCGACGTttgctttaaaacatttttcaaagcttCTCGCTTGAGGAGTCATAAAGTAATGCACACCGATGAGAAACCTTTTGTTTGTGACATATGCTCGGCATCGTTTAAGCGGAACAATGCTTTGTACAATCACATGAAAAAAGTACACCAAATGATTTATAGTTGCGAGGAATGTAGACTAATCGTCAGTTCGAACCTTGCTTTGAAGTTGCACATGAACTTTCATACTAAGAAGTTTGCGTTCGAGTGTTTGTTGTGTGAAGATCCGTTTTACACGAAAGACGACGCCGTGAAACATCTTTTAGACGCTCACGAAAAATATGAGTTCAAACCAAATGTGGCTTTCAAATGTAATCTTTGTGGAAAGTATCTTGCTTCGGGACGAACTTTGAACGAACACATGAAAGACGTACATCCAGATGAGTTTCGATGCAAACATTGTAacgaaatatttagtttaaataaattcttgaaaGAGCATATGAAAAGTCATTCAAGCAATGGGGCGAAAAGACCTGGTCGTCTTAACCAAACTAAGCTgtacaaatgtaaatattgcCGAAAGAATCTTGATTCAGTCTGCACTTTGGTCGATCATCAAAAAACATTCCACCCAAACGAAATTGACGATTCGCATATGAAAAGTCATTCAAGCAATGAGAGTGGGGCAAAAAATAATGGTCGAATTAATCAAAGCAAACTGTCCAAATGTAGATTTTGCCGAAAGTATTTTGATTCAATCGACGCTTTGGTCgaccataaaaaaacatttcaccCAAACGAGATTAATGATCATTCGAAGCACGAATGTAACGTGTGCGGTAAACTTTTGGCAAATAAAAGTTCGTTATATATACATAAGCAATCGCATGGAGATAAATTGATCTGCCACATTTGTGGTAAGCCTTTAGCAAGCAAGTTGGGTCTGACCGAGCACTTACGATTGCACAACAACGTGAAACCTTATCAATGCGAAGTTTGTGGCAGACGTTTTACGAAACTTAGCAATTTGGGTCCACACCGTCGCACTCACTATCAAGCGAAGATTCATAAATGCAACCTTTGCGAGAAAGCTTTTAGCCAAAGATGTACTTTGGTGATTCACATGAGACATCACAGTGGTGAGAAGCCGTTTAAATGCGGGTTGTGCGATAGCGCTTTTGTGAGCAGTTCTTTGCTTAGAAATCACATGAAGAGGCTGATCCAGCATCAAAAGATTCACGACAAATTCAAACCgtacaaatgtaaaatttgcgAAAAAGATTACGTAGAACAACATCATTTAAACGCACACATTCAAACTCATTCTGGCGTGAAACCTTACAGGTGCGATTCTTGCGGAACGTCTTTCAATCAAAAATCTTCTTTAACTATGCATACTAGGTTCAATCCCCTACAATTGCGCTTTGCGAATCAGTGCGGCACTTGCTTgagaattttttctacaaaaaaccATTTGCAAAAGCATCAAATTACTCACACCAAAGATCAACCGTACTCATGCAGCATGTGTCCAACGCTCTTTAAGAGAAAGAATTCGTTAAATGTTCACATTCAGAATGTtcacgaaaagaaaaattgtcgTCAATGCGAAATTTGCGACAAAATTCTCTCTTCGAAGCAAAACTTCTTGATGCACATGAGCCGACATACAAAAGATTTTGCGTTTCGCTGTCCGTTGTGCCCGAACACATATTGCACGAAAGTTCAGCTCGAAAGTCATGTGTCGAGGATTCATGAAAACGCCGTTTTCGAATGCAACATTTGCGGAAAACCTCTTTCTTCGAAGCGCGCTTTGTCCGAACACAAGAGAAGGCACAACGCCACCATCCAACCTAATGAGAATATAAAGTGCGAGGTGTGTGGAAAATGTTTTCCAAGCAAGGGGATATTGAATCGGCATATAAAGTTGCATGGAGATAGGTTGATCTGTCACGTTTGTGGTCAGCAGGTGGGGTCGAACAAAAGCTTGCTCGAACACTTATTACTACACGAAAACATAAAACCTCACAAATGCGAAATATGCAACAAAAGTTTCACCAAACAAACCGCCTTGATTGTACATCTTCGTTGTCACACCGGTGCGAAACCTTACCGGTGCGAGATTTGCGGAAAATCTTTTAGTCAAAGATCGACTTTGGTGATTCACATTAGGTATCACACCGGCGATAAGccttataaatgtaatttatgcgTTCGCGCTTATGTCAGCAAGGCTTTGCTGAACAAACACATGAACAAAATGCATtcagtttttgtaaaagataataaaattgttccAGACTATGGTGTGTTTTACTTGATTTTACCTTAtttaaaacctttaataaaattaaatggatTAATTAATGTTGGCTGTTAA
Protein Sequence: MEAGVLKMGKGHTNTTTGSVIGRNQCDVCFKTFFKASRLRSHKVMHTDEKPFVCDICSASFKRNNALYNHMKKVHQMIYSCEECRLIVSSNLALKLHMNFHTKKFAFECLLCEDPFYTKDDAVKHLLDAHEKYEFKPNVAFKCNLCGKYLASGRTLNEHMKDVHPDEFRCKHCNEIFSLNKFLKEHMKSHSSNGAKRPGRLNQTKLYKCKYCRKNLDSVCTLVDHQKTFHPNEIDDSHMKSHSSNESGAKNNGRINQSKLSKCRFCRKYFDSIDALVDHKKTFHPNEINDHSKHECNVCGKLLANKSSLYIHKQSHGDKLICHICGKPLASKLGLTEHLRLHNNVKPYQCEVCGRRFTKLSNLGPHRRTHYQAKIHKCNLCEKAFSQRCTLVIHMRHHSGEKPFKCGLCDSAFVSSSLLRNHMKRLIQHQKIHDKFKPYKCKICEKDYVEQHHLNAHIQTHSGVKPYRCDSCGTSFNQKSSLTMHTRFNPLQLRFANQCGTCLRIFSTKNHLQKHQITHTKDQPYSCSMCPTLFKRKNSLNVHIQNVHEKKNCRQCEICDKILSSKQNFLMHMSRHTKDFAFRCPLCPNTYCTKVQLESHVSRIHENAVFECNICGKPLSSKRALSEHKRRHNATIQPNENIKCEVCGKCFPSKGILNRHIKLHGDRLICHVCGQQVGSNKSLLEHLLLHENIKPHKCEICNKSFTKQTALIVHLRCHTGAKPYRCEICGKSFSQRSTLVIHIRYHTGDKPYKCNLCVRAYVSKALLNKHMNKMHSVFVKDNKIVPDYGVFYLILPYLKPLIKLNGLINVGC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -