Basic Information

Insect: Abscondita terminalis
Gene Symbol: -
Assembly: GCA_013368085.1
Location: JABVZW010001374.1:360344-367218[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 31 0.0033 0.17 12.6 4.5 3 23 12 33 10 33 0.97

2 31 3.8e-05 0.0019 18.7 0.2 1 23 38 60 38 60 0.98

3 31 0.00053 0.027 15.1 0.9 1 19 71 89 71 92 0.94

4 31 5.5 2.8e+02 2.5 0.2 10 23 91 104 90 104 0.90

5 31 1.3e-07 6.6e-06 26.5 3.1 1 23 110 132 110 132 0.98

6 31 1.8e-08 9.2e-07 29.2 1.2 1 23 138 160 138 160 0.98

7 31 5.1 2.6e+02 2.6 0.2 1 12 166 177 166 181 0.85

8 31 0.029 1.5 9.6 1.8 1 23 187 210 187 211 0.96

9 31 1e-05 0.00053 20.5 0.2 1 23 215 237 215 237 0.98

10 31 0.00016 0.0084 16.7 0.7 1 23 247 269 247 269 0.96

11 31 1.2e-05 0.0006 20.3 0.3 3 23 275 295 273 295 0.97

12 31 0.001 0.053 14.2 5.5 1 21 301 321 301 323 0.96

13 31 4.3e-08 2.2e-06 28.0 0.8 1 23 329 351 329 351 0.98

14 31 8.1 4.2e+02 1.9 0.2 1 10 357 366 357 377 0.82

15 31 1.2e-05 0.0006 20.3 0.3 1 23 382 404 382 404 0.99

16 31 0.0005 0.026 15.2 0.4 1 23 414 436 414 436 0.98

17 31 4.5e-05 0.0023 18.5 0.3 3 23 442 462 440 462 0.97

18 31 1.1e-06 5.5e-05 23.6 2.8 1 23 468 490 468 490 0.99

19 31 3.6e-08 1.8e-06 28.2 1.4 1 23 496 518 496 518 0.98

20 31 0.00069 0.035 14.7 1.4 1 23 524 547 524 547 0.98

21 31 0.0031 0.16 12.7 0.5 2 23 562 583 561 583 0.97

22 31 0.0002 0.01 16.5 4.6 1 23 589 612 589 612 0.94

23 31 0.00011 0.0057 17.2 0.9 1 23 618 640 618 640 0.97

24 31 0.0048 0.24 12.1 3.9 1 23 646 669 646 670 0.96

25 31 8.1e-05 0.0041 17.7 0.1 1 23 674 696 674 696 0.98

26 31 0.51 26 5.7 1.6 1 23 706 728 706 728 0.90

27 31 0.0021 0.11 13.2 1.0 3 23 734 754 732 754 0.97

28 31 2e-06 0.0001 22.8 3.1 1 23 760 782 760 782 0.99

29 31 2.4e-07 1.2e-05 25.6 2.9 1 23 788 810 788 810 0.98

30 31 0.052 2.6 8.8 0.3 1 23 816 842 816 842 0.93

31 31 9.6e-05 0.0049 17.4 3.3 1 23 847 869 847 869 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	31	0.0033	0.17	12.6	4.5	3	23	12	33	10	33	0.97
2	31	3.8e-05	0.0019	18.7	0.2	1	23	38	60	38	60	0.98
3	31	0.00053	0.027	15.1	0.9	1	19	71	89	71	92	0.94
4	31	5.5	2.8e+02	2.5	0.2	10	23	91	104	90	104	0.90
5	31	1.3e-07	6.6e-06	26.5	3.1	1	23	110	132	110	132	0.98
6	31	1.8e-08	9.2e-07	29.2	1.2	1	23	138	160	138	160	0.98
7	31	5.1	2.6e+02	2.6	0.2	1	12	166	177	166	181	0.85
8	31	0.029	1.5	9.6	1.8	1	23	187	210	187	211	0.96
9	31	1e-05	0.00053	20.5	0.2	1	23	215	237	215	237	0.98
10	31	0.00016	0.0084	16.7	0.7	1	23	247	269	247	269	0.96
11	31	1.2e-05	0.0006	20.3	0.3	3	23	275	295	273	295	0.97
12	31	0.001	0.053	14.2	5.5	1	21	301	321	301	323	0.96
13	31	4.3e-08	2.2e-06	28.0	0.8	1	23	329	351	329	351	0.98
14	31	8.1	4.2e+02	1.9	0.2	1	10	357	366	357	377	0.82
15	31	1.2e-05	0.0006	20.3	0.3	1	23	382	404	382	404	0.99
16	31	0.0005	0.026	15.2	0.4	1	23	414	436	414	436	0.98
17	31	4.5e-05	0.0023	18.5	0.3	3	23	442	462	440	462	0.97
18	31	1.1e-06	5.5e-05	23.6	2.8	1	23	468	490	468	490	0.99
19	31	3.6e-08	1.8e-06	28.2	1.4	1	23	496	518	496	518	0.98
20	31	0.00069	0.035	14.7	1.4	1	23	524	547	524	547	0.98
21	31	0.0031	0.16	12.7	0.5	2	23	562	583	561	583	0.97
22	31	0.0002	0.01	16.5	4.6	1	23	589	612	589	612	0.94
23	31	0.00011	0.0057	17.2	0.9	1	23	618	640	618	640	0.97
24	31	0.0048	0.24	12.1	3.9	1	23	646	669	646	670	0.96
25	31	8.1e-05	0.0041	17.7	0.1	1	23	674	696	674	696	0.98
26	31	0.51	26	5.7	1.6	1	23	706	728	706	728	0.90
27	31	0.0021	0.11	13.2	1.0	3	23	734	754	732	754	0.97
28	31	2e-06	0.0001	22.8	3.1	1	23	760	782	760	782	0.99
29	31	2.4e-07	1.2e-05	25.6	2.9	1	23	788	810	788	810	0.98
30	31	0.052	2.6	8.8	0.3	1	23	816	842	816	842	0.93
31	31	9.6e-05	0.0049	17.4	3.3	1	23	847	869	847	869	0.99

Sequence Information

Coding Sequence: ATGGATCGCCATTTGAATAACTTAGCGTTTGGGTGTACGATGTGCGAGAAAAGATTTTGTACGAAAGACGGGATTAAACATCACATGTTAAAAGTACACTTAAATGTAATGTACGAATGTGACATTTGTGGAAAACCTCTTTCATCGAAGCGTTCTTTAGCTCTCCACAAAAAAATGCACGACGTTGTCGTTCCAGAGTTGGAATCGATACACAAGTGTGAGGTGTGCggcaaatttttttctcaagagCGAAAATTGAGATATCATAGTGTGACTACAAAAGAGAGTTTGATGAACCACCTTCTAGTGCACGATAAATTGAAGCTTCACGAGTGCGAAAAATGcggcaaaaatttttcaaacaagaaCAACTTAAGAGTACATCTACGAACTCATTCGGGTGCGAAACCATACCGATGCAAGACATGTGGGAAATCTTTTGCTCAAAGTTCGTCTTTGACGATTCACATGAGACTACATACCGGCGAGAAGCCATACAAATGCAATTTATGCGAGCTCGGTTTTATTCACATGAACCGTCACAATCAGAAGTTTGGATTCGAGTGTTTGTTGTGTTTAAAGCGATTTTATACGAAAACTGAAGTTGAACAGCACGTGTTGAAGATTCATCACAACGTGACGTACGATTGCGATATTTGCGGAAAACCTCTTGCTTCGAAAAGTTATTTGGCAAGACACAAGCAAACGCACGAAGTTGTTCACAAGTCAGATTTGAAGTTTGCGTGTGAAGTATGTGGAAAACGTTTCCAAAATCAGCGAAGACTGAATCAACATGGGAAAGTTCATGGAGATAAGGTTATCTGTCATATTTGCGGCAAAGTTCTGACGACCAAGGCCAGCTTGATTGAGCACTTGCGATTACACGCCAAAATGAAGCCATACAAGTGTGAATATTGTGACAAGCATTTTGCAAAACAGAACACGTTAAGTGTACATCTTCGATGTCACACTGGCATGAAACCTTATAGTTGCAAAGTTTGCGGCAAATCTTTTACTCAAAGTGGTTCTTTAAAGATTCACATTAGGCAACATACCGGCGAAAAACCATACAAATGCGATTTATGCGAGCTAGCGTTTGGTGAGGTTGAACAGCACGTATCGAAAGTACATCACAACGTCAAGTACGAGTGCGACATTTGCGGAAAACCTCTTACTTCTAAAGGTTATTTAGCAACCCACAAGAAAACTCACGAAATTATAAACCAGTCAGATTTGAAGTTCGAGTGTGGAGTGTGTGGAAGACTATTTGCAAACCAAGTAAGACTGAATCATCATGGAAGAATTCATGGAGATAAGGTCATATGTCACATTTGCGGCAAAGGTCTGACGAGCAATACCAGTTTGATTGAACACTTGCGAATACACGATAAGATGAAGCCTTACAAATGTGAACATTGTgataaaagttttgcaaaacaAACCACGTTAAATGTTCACGTTCGATCACACACTGGCGTGAAACCTTATAGTTGCAAGCAGTGCGGCAAAACTTTTACTCAAAGCGGTTCTTTGAAAATTCACATGAGACTACATACCGGCGAGAAGCCATACAAATGCGATTTATGCGAGCTTGGTTTTGTGAGTAAGAATTTGTTGAACAAtcacaagaagaaaaaacattcagtagttttgGCCACTATCGATCAGTTACTTTTTGAGAATCAGTGCAACGTGTGTTTAAGAATATTCCCTTCAAGACGAACTTTGAACGATCACCAAACTGTGCACTCTGATGAGAAACCGTTTTCGTGCAGCACATGTCACGTACAATTTAAGAGAAAGTCTTCGCTCAAAAATCATATGTTTAATATTCACCAAAAAAAAGATTGTCATCGATGcgaaatttgtaacaaaatcatCAACTCGAAGTATAATCTGGCGATACACATGGACCGCCACcttaagaaattcaaatttcagtGTTTGTTGTGCGAAAAAGGGTTCTATACGAATGCCGAATTTACACATCATACATTGAAGGTCCACCACAATGTGATGTATGAGTGCGATATTTGTGGAAAACCTCTCGCTTCAAAAGACTATTTGAGTGAGCATAAAAAAATCCACGACGTAATTCGTTTGACGgatcaaaattataaatgcgAGTTGTGCGGCAAGCTGTTTTTGATCAAGCGAAGATTCAACGAGCATGTAAAAAAACACGCGTTTAAAGTTATCTGTCATATGTGCGGGAAGCTTATGACGAGTCAAAAAGGTTTGACCGAGCACATGAGGTTGCATAACAACGTGAAACCGTATAAATGCGAAATTTGTGGCAAAGGTTTTACGAAACAATGCAATTATAATGTTCATCTTCGATCTCACTCTGGCATGAAGCCATACAGTTGCGAGACTTGTGGAAAAACGTTTACTCAAAAAGGTACATTGACAATTCACATGCGACATCACACGGGCGAGAAGCCTTACGAATGCGATTTGTGCGATTATACTTCTGTAGGATTTTATACGAACACCGAGTTAAAACGTCACGTATTGAAGGTCCATCAAAAAGTTGTATTCAAGTGTGATATTTGCGAAAAGACTTTAGCAACAAAATGTTCTTTACGAGTACACAAAAGAACTCACAGCATCAAGAATTTCAAGGATGATGTATTCGCTCAATATAAGATCGAACCGGCGTCTTCAAATACTTCCGAATAA
Protein Sequence: MDRHLNNLAFGCTMCEKRFCTKDGIKHHMLKVHLNVMYECDICGKPLSSKRSLALHKKMHDVVVPELESIHKCEVCGKFFSQERKLRYHSVTTKESLMNHLLVHDKLKLHECEKCGKNFSNKNNLRVHLRTHSGAKPYRCKTCGKSFAQSSSLTIHMRLHTGEKPYKCNLCELGFIHMNRHNQKFGFECLLCLKRFYTKTEVEQHVLKIHHNVTYDCDICGKPLASKSYLARHKQTHEVVHKSDLKFACEVCGKRFQNQRRLNQHGKVHGDKVICHICGKVLTTKASLIEHLRLHAKMKPYKCEYCDKHFAKQNTLSVHLRCHTGMKPYSCKVCGKSFTQSGSLKIHIRQHTGEKPYKCDLCELAFGEVEQHVSKVHHNVKYECDICGKPLTSKGYLATHKKTHEIINQSDLKFECGVCGRLFANQVRLNHHGRIHGDKVICHICGKGLTSNTSLIEHLRIHDKMKPYKCEHCDKSFAKQTTLNVHVRSHTGVKPYSCKQCGKTFTQSGSLKIHMRLHTGEKPYKCDLCELGFVSKNLLNNHKKKKHSVVLATIDQLLFENQCNVCLRIFPSRRTLNDHQTVHSDEKPFSCSTCHVQFKRKSSLKNHMFNIHQKKDCHRCEICNKIINSKYNLAIHMDRHLKKFKFQCLLCEKGFYTNAEFTHHTLKVHHNVMYECDICGKPLASKDYLSEHKKIHDVIRLTDQNYKCELCGKLFLIKRRFNEHVKKHAFKVICHMCGKLMTSQKGLTEHMRLHNNVKPYKCEICGKGFTKQCNYNVHLRSHSGMKPYSCETCGKTFTQKGTLTIHMRHHTGEKPYECDLCDYTSVGFYTNTELKRHVLKVHQKVVFKCDICEKTLATKCSLRVHKRTHSIKNFKDDVFAQYKIEPASSNTSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -