Basic Information

Insect: Abscondita terminalis
Gene Symbol: -
Assembly: GCA_013368085.1
Location: JABVZW010001848.1:721128-722588[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 2.7e-05 0.14 12.4 1.8 11 41 154 181 146 183 0.80

2 8 0.0006 3 8.1 0.5 19 39 190 207 186 215 0.90

3 8 0.0024 12 6.2 1.9 1 38 201 234 201 237 0.87

4 8 0.1 5.2e+02 1.0 0.2 14 33 241 262 235 266 0.76

5 8 0.00033 1.7 8.9 2.1 19 41 274 293 271 300 0.90

6 8 0.026 1.3e+02 2.9 0.3 18 29 301 312 294 323 0.82

7 8 0.00067 3.4 7.9 2.0 16 41 327 349 317 352 0.85

8 8 0.0012 5.9 7.2 1.0 13 39 352 375 349 381 0.80

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	2.7e-05	0.14	12.4	1.8	11	41	154	181	146	183	0.80
2	8	0.0006	3	8.1	0.5	19	39	190	207	186	215	0.90
3	8	0.0024	12	6.2	1.9	1	38	201	234	201	237	0.87
4	8	0.1	5.2e+02	1.0	0.2	14	33	241	262	235	266	0.76
5	8	0.00033	1.7	8.9	2.1	19	41	274	293	271	300	0.90
6	8	0.026	1.3e+02	2.9	0.3	18	29	301	312	294	323	0.82
7	8	0.00067	3.4	7.9	2.0	16	41	327	349	317	352	0.85
8	8	0.0012	5.9	7.2	1.0	13	39	352	375	349	381	0.80

Sequence Information

Coding Sequence: ATGGctgtaaatttcaatttgcaaaaaatttgtcGCGGATGTTTAACAGAAAACGGAgagatgttttcaatttttaacaataataaactcgatatacaaaatatgtttgaaaGTTGCACTTCCTTGAAAATCAATGAAAATGATACGTTTTCAACAATATGCAGTATGTGCATTTctcttttagaacaattttaCAAGTTTCGACAAAAATGCATTCAATCTGATTTGAAAATAACGAGCCTGAGAGAAAGGAATTGTAATTTCAATGTCATTGAGAATAcagaattttttgaagatattacATCGAATGAAAGTGAAAGTTTACATTATAGTTGtgataaatgtttaacaaaatttaatttggaacaTGATTTGAACCTTCACTTAGAGGTTTTCCATAATAAGCTTCGACATTTGGATCGAGAAGTGCAGGAAAAGaaatcacaTGATCAAAACATAGATGTCTCGTCAAAATCGTTTAAATGCAAGCTATGCAGTAAAACGTACACTAGTTcgaataatttagaaatacacATGTACAGTCACACCGGTCTTAAaccattttcttgtaaatattgcGACAAAAGATTTACGAAAGCATCACGTTTAAAATCTCATTTATCTATTCATACAGGAGACTATTCATACTTTTGCAATCAATGTGGAAAAGGATTCAGCACCAACTCAGGTTTAAAAAGGCATAAAATATCGCATACAGGTGAAAAGGCTTACAAATGCGATCAGTGTAAAGCAGAATTTGTTACTTCTGGCGATTTAACAGTTCATAATCGTATACATACTGGAGAGCGACCATATTTATGTTCAATTTGCGGAGCTACATTTTCGAGGACAACCCATTTAAACACCCATATGAGAACTCACACAGGAGAAAAACCTCATAGATGTTCCATATGTGATAAAGCGTTTGCCAGAGCAGGTGATTTAAGATCTCACGAAAGAAGTCACACCGGCGAGAAGCCTTACCAGTGTTGTGTTTGCAAAAAGAACTTCGTACAAAGTAGCGGTTTGGCATCACATATGAGAACTCATACTAGTGAAAAATCGTTTGAATGTATAGTTTGCAACAAAGCTTTTTCGAAGTGGAGCAGTTTAAACCGACATATGCTTTACCATAATCGCACTTCGATTTAA
Protein Sequence: MAVNFNLQKICRGCLTENGEMFSIFNNNKLDIQNMFESCTSLKINENDTFSTICSMCISLLEQFYKFRQKCIQSDLKITSLRERNCNFNVIENTEFFEDITSNESESLHYSCDKCLTKFNLEHDLNLHLEVFHNKLRHLDREVQEKKSHDQNIDVSSKSFKCKLCSKTYTSSNNLEIHMYSHTGLKPFSCKYCDKRFTKASRLKSHLSIHTGDYSYFCNQCGKGFSTNSGLKRHKISHTGEKAYKCDQCKAEFVTSGDLTVHNRIHTGERPYLCSICGATFSRTTHLNTHMRTHTGEKPHRCSICDKAFARAGDLRSHERSHTGEKPYQCCVCKKNFVQSSGLASHMRTHTSEKSFECIVCNKAFSKWSSLNRHMLYHNRTSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00003972;
90% Identity: iTF_00003972;
80% Identity: iTF_00003972;