Basic Information

Gene Symbol
Arid4b
Assembly
GCA_013368085.1
Location
JABVZW010000102.1:988387-994627[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.3e-26 6.6e-23 81.1 0.1 1 89 297 382 297 382 0.94

Sequence Information

Coding Sequence
atgCAAGGAGACGACCCTCCTTACTTATCTGTAGGCACTGCAGTTAGTGCAAAATATAAAGGAGCTTTTTGTGAAGCAAAGGTATCGAAAGTGGTTCGTGTTGTGAAATGTAAAGTCACTTATAAAATGGGTTTGGGTACTGCTACAGTTAGTGATGAACAAATTAAAGGACCTTTACGTGTTGGTCAAGTTGTACAAGCAAAACATCTTGATAAAAAAGAGTTTGTTGATGCTACTATTACGAAAATACAAGATTGTAGTCAGTATACGGTTGTATTTGATGATGGAGACATTACCACGTTAAGAAGAACTGctttatgtttaaaaagtgGACGGCATTTTAATGAGAGTGAAACTTTGGATCAACTACCTTTAACTCACCCGGAACACTTTGGAAATCCTGTAGTTGGTGGTAGAAGAGGCAGAAGAAGTCGTCAATTAAAAGAAGATAGTAGTGAGGGAGAAGTCGAAGAAGAAAACGAACCTGATCTGGAATTATATACAATGGAAGTGGGTCGTGTAGTGTGTGTTGAGGCtagtgataaaaaaagaaataaggacAATTGGTTTCCAGGATTGGTGGTTATGCCTTCTGCACAACCAACTGTCCGTATCAATGTTAAGGATGAGTTCCTTGTGAGATCATTTAAAGATGGAAGATaTTACACAGTTCCACAGAAGGAGGTAACTGAGTTCAGCCGAGATATGGtttctaaaattgaaagtaCAATGTTATCGGAGGCAGttgaaaaagtaatgaaatattTGGATAGTGATGAGCTTCCAATTCACTGGGAAAGAAATTTGCTTTTCCACAACTCATTGCAAGCACCCTCATCTGATTCTGATGAACATTTTACAGATAGTTCCGACGACGAAACGCCCGAAGAAAAGGATCATTTCGTTGCGCAATTGTACAAATTCATGGACGATAGCAATACACCATTAAATAAAAGTCCCACTATTGGAAATAAAGATGTCGATCTTCACAAACTTTTTGGCCTTGTTAGAAAACTAGGCGGATATAACCGCGTGACGAACAAAAGTAAATGGAGATCCGTTACTATTAGATTGAAATTGCCGAATAATTTAACTACCCACAACCAAGTCAAATTggtatacaaaaaatgtttgttaagttATGAAGCATTTCATCGTACTTTAGGTGTTACAATGCTCAATCATCCGCGTAATGCCAAAAAGAGTAGAGGACGTAGTTTGATCAGGGACAAAGATCGCAGCACGCCAGTTAACAGTCCTCGAccagaaaaggaagaagaaccTATCCTGcttgaaaaaaaggaagaagaaaaaccaCTCGAGGATAAGCCTAAAATGATTAAGAAAATTGATACAAAAGTCAAAGTagaggaagagaaaaaaattaaagaaatttccGTGGCCGAAATAAGTGATACAAATAGTAGCGATACAACTGAGATTTTAGAAGTTACCACTAACGTATCTGTAAGATTAAGAAGGGCAGATTCAAAGTCAAGTCGCGAACGTAAACCCAAGCTACCAACTGGAGAGAAGGTAAAAGCACtagttgaaaaatttgaagaacaagcaaaaaaagaagaaaaagaagaagacaagCAACAGACTAGGTCGAAAACACAAACGCCAAAGCCTAAAGAAAAAGAGATCGTTCCAGAAAAGAGAATACACGAATCAAAAACTCCGGTTCGAGACTTACCATCTTCCAGCAAAacaccaaataaaattataaagaaagtCGAAGACGAAAGAAGAGGGGGCGGAAACGAATCCACATTGATGAGAAAGATAAAGCCTTATCGGAAAGTGTTTTACGGCCCCACAAACGAGTCGTCTAAAGTTACTTACGAAGCGAAGGTTATCGAAATTGATAAAGAAGGCCTTAATCATACATACTTGGTACACTACACGGGGTGGAATACTCGGTACGATGAATGGATATCCTCGGCGCGTATAGCAGAAAACTTAAGCGCAACTACGAAGGCGAAGAAATTAAAGCAAGGTATTTCTTCGGGAACGAAGccaacGACGCCAAAGTCTTTAGCCAAAAGGGGTAGGAGAATGTCAGTTTCTGTCCGAAGCGCCTCTCAAGAGATCCCTCGATCAACCACACCTTCTAGTGTAACATCAACTTCTAGTCGAACTAAAAGTCCTGGGACTCCAGTTACGAGAAACTTTCGTACCACAAGATTAGGAGGAGAATTCAATAGAAGAACTAGGCGCACATCGGGTCAAACTGACGTATCCAACCATTCGGAATCAGATTCGGATATAACCGAAAGCGATTCAGATGTTTCTAAAACCAAATCAAGCGTTCCGAAAGGTGAAGAATCCGAAACTcgcattttcaagaaaaaagtgATGAAACCGGTTCTGATGAAGGTGGACAAGAAGAAGGATAAAGACGAAGATGACACGGAAAAAGAGGAAGACGCTGTTGTTGTCGAAAAACCTAGACGCActagaaagtataaaaaatctgaaactaaGGTCAGAGATAGCGATGATGATAGTGGGAGTCCACCGAAAGGTCGCGATTTTGACTTAAATCAAATTAGATCAGAACTCAAAGGACTGGTCAAAGCTGTTAAGATACCAAATGCGGATGCTTCTGAAAAGGACGCATTGTCTTCGGATGAGTCGACTCCTATAGCAGACCTATCTATAAAAACTCCAGGGACCCCAGAACcagataaagaaaaagaaagtccTGTTCAAAAATGTGTAAGCTCTGATGATGTATACGAATTTAAAGAACCGGAACCGTTTGAATTTGAAAGTAGAACCAAATTAGTagatgataaaaacaaaaaacgtttggTTCCTAGAATTTTTGACGATTTAGATAAATCGCCGATTAAACGCCGAACAGCTTCCcctgttaaaattaaagaagatgaCGTCATTAGAAAACCGCTGCGCCGTACACCAATTAAAAAGTCTGATTTAATAGATGACGATGATGATGACGACATTAGTATCGACACTGATGTTACAAAGTTAGTAATTGAAGATCCGTTTGATAAGCTTGTAGAATCGCCTTCTTTTCAtagtggaaaagaaaaaatttcaaatctcaCATTAGACGAGAAACACAAGGtggttaaaaatttgaatttagacGAACCTTTAAGTTTATTTCATGGATTATCGGAGACAAGAGAAGATGACAGTGGAGACCAGTTGGACATATCAGATACAGAAGAATCTCAAAACGAACCGTTATTTACACATAAAGAACAACTGTTTTCTGAAGCCACTTTCTCAAAGGCTTCTCCGGATCACACCAGTTTAGATCCTATATTTAGAGGTTTTATGCCGAAAATTGACGACAGAAAACAGAAGGATAGTGACGACGATGATGCGATAAGAGCGTCGATTCAGAGTGTGATAAATCAAGCGTCTTCCACCGATGATGATAGTAACGATGCACTTTTGATAAATCCACCTTTCACACCGTTTGCCGATGCCAAAATTGACGtGAAATCGTCTATTTCTGTATCAACTGGGGGAGAAttggaaaatagttttaagatcACTAATGTACCTTTGAAAgtagaaacaaaagaaattaaaggagTTGCCGACGATCATGTACCGCCCGTCAAACACATATCACCAGCACTTCAAGAAACCGATAGTTCATTAATGGAAGCAATTCGTACGCCTTGTGAGATTATAACAAAGTTAGATGAAACGAAAGATATAAGTTTAAAAACTGGTACAAAAATAGCAGATACGTTGTTGCAAAAGTTTAACATGATTAAAAACGACCCTAAAGAGAAAGGTAATGTAGATGAGGATAAGGCAAAATCAGAAACGATGAAACTTGAGCCTCACGTGATTGAATCGTTTCCTACGACAGAAGATATTAAAATTGAACCTcccgaaataaaaattaaaggggAAGTGAAGGTTAAAACAGATTCTAAAGCTAAAGTTGTAGAACACAAGAAACTTCCagaatctaaatataaaatagaatctAAGGCAAAACctgcagaaattaaaactaaaactccCATCCTCAAAAGAGAATCTActccagaatttaaaaaacgaccTCGTAAGGTTGTTAGTCGAGAATTTATTGAAGAATCTGACACTGATAGTACCGATTCCGAGGAACGTCTAGTAATAGCGCGTTCTGATGAAGAATCTCAAACTAATTCTTCAATGGATGTGAAAACTGATAACAAGGAGAGTAGCAATTTAAGCGCTGCTGATGCTTCTCAATCGGCTCACACcgattatagttttaaattcgATGAAGGCGATATGAAACATGAAGTAAAAATAGATGATCTAAAGAAGGAAGAAGAACCAGATTCGCACTTGCACTCGCTTCTTCTATGTGAGGAAACAATTCCTGGCAGCCCTGCACCTCCAACTGAAGGAATGTTACCATCCgaaatgaaatcaaaaacaaaatctgttCTTGAAATGCCTTTTGCTAGTGCTCCTGGgagtagtaataataataaagcagAAAATACTGTAAGAGAAGCAAAGGTGATAAACAAGGAAAGAGGGCAAGCGCCTGTCATAGTACATCAAGTTGATAATCGCGAGAAGGAATCTAGGGAGGCTTCAACCGTTTTGGATAACACACCACCCACTACTCCAGAAAGTACGCTTAGCAATTTATCGCCCAGAGGAGATCCTGGTGACTTATCAACAAACACTGGCGATAATGAAAGCTGTAAGTCTGGTGATGGCGAAGTCGAATATAATGTTCAAAGAAGAtgttcttcaaataaaatatctcCTTACAGTGAAGAAGGTAGCATGGACACCTTACTTAATAATGCTGAATTAAGTAATCCTAGTAAAAAAGTACTAGATAACATAAATCCATCGCCTTGTAGAAAAAGAAGGCGCTCTTGTAAAGGTTCTGATGATATTCCGTCGAAAAGAGGTAGAAAACCAGCTAACCGTTCTAGGCACAATAGCGATAGTGACGATACGTCCGAACATTCGATGCCAGGAAATTTACCTCTACCTTCGAGTTTATCCGTCGATACTCGTTTAACTAGGTCACCTAAACCGTCTAAATACAACTTCTATGTTGATCTCGATCCTAGTTTGGATAGTGCGCAAAGGATTGCCATTTTACAACAAAAGCTACAAGAAATCCGTAAAACGTACGCCGATGTGAAAGCGGAATTAGCAGCGGTTGAGCGCCGAAGGAAGAAGTTAAGAAGAAGGGAACGAGAAgTCTTAAACGGTTAA
Protein Sequence
MQGDDPPYLSVGTAVSAKYKGAFCEAKVSKVVRVVKCKVTYKMGLGTATVSDEQIKGPLRVGQVVQAKHLDKKEFVDATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVVGGRRGRRSRQLKEDSSEGEVEEENEPDLELYTMEVGRVVCVEASDKKRNKDNWFPGLVVMPSAQPTVRINVKDEFLVRSFKDGRYYTVPQKEVTEFSRDMVSKIESTMLSEAVEKVMKYLDSDELPIHWERNLLFHNSLQAPSSDSDEHFTDSSDDETPEEKDHFVAQLYKFMDDSNTPLNKSPTIGNKDVDLHKLFGLVRKLGGYNRVTNKSKWRSVTIRLKLPNNLTTHNQVKLVYKKCLLSYEAFHRTLGVTMLNHPRNAKKSRGRSLIRDKDRSTPVNSPRPEKEEEPILLEKKEEEKPLEDKPKMIKKIDTKVKVEEEKKIKEISVAEISDTNSSDTTEILEVTTNVSVRLRRADSKSSRERKPKLPTGEKVKALVEKFEEQAKKEEKEEDKQQTRSKTQTPKPKEKEIVPEKRIHESKTPVRDLPSSSKTPNKIIKKVEDERRGGGNESTLMRKIKPYRKVFYGPTNESSKVTYEAKVIEIDKEGLNHTYLVHYTGWNTRYDEWISSARIAENLSATTKAKKLKQGISSGTKPTTPKSLAKRGRRMSVSVRSASQEIPRSTTPSSVTSTSSRTKSPGTPVTRNFRTTRLGGEFNRRTRRTSGQTDVSNHSESDSDITESDSDVSKTKSSVPKGEESETRIFKKKVMKPVLMKVDKKKDKDEDDTEKEEDAVVVEKPRRTRKYKKSETKVRDSDDDSGSPPKGRDFDLNQIRSELKGLVKAVKIPNADASEKDALSSDESTPIADLSIKTPGTPEPDKEKESPVQKCVSSDDVYEFKEPEPFEFESRTKLVDDKNKKRLVPRIFDDLDKSPIKRRTASPVKIKEDDVIRKPLRRTPIKKSDLIDDDDDDDISIDTDVTKLVIEDPFDKLVESPSFHSGKEKISNLTLDEKHKVVKNLNLDEPLSLFHGLSETREDDSGDQLDISDTEESQNEPLFTHKEQLFSEATFSKASPDHTSLDPIFRGFMPKIDDRKQKDSDDDDAIRASIQSVINQASSTDDDSNDALLINPPFTPFADAKIDVKSSISVSTGGELENSFKITNVPLKVETKEIKGVADDHVPPVKHISPALQETDSSLMEAIRTPCEIITKLDETKDISLKTGTKIADTLLQKFNMIKNDPKEKGNVDEDKAKSETMKLEPHVIESFPTTEDIKIEPPEIKIKGEVKVKTDSKAKVVEHKKLPESKYKIESKAKPAEIKTKTPILKRESTPEFKKRPRKVVSREFIEESDTDSTDSEERLVIARSDEESQTNSSMDVKTDNKESSNLSAADASQSAHTDYSFKFDEGDMKHEVKIDDLKKEEEPDSHLHSLLLCEETIPGSPAPPTEGMLPSEMKSKTKSVLEMPFASAPGSSNNNKAENTVREAKVINKERGQAPVIVHQVDNREKESREASTVLDNTPPTTPESTLSNLSPRGDPGDLSTNTGDNESCKSGDGEVEYNVQRRCSSNKISPYSEEGSMDTLLNNAELSNPSKKVLDNINPSPCRKRRRSCKGSDDIPSKRGRKPANRSRHNSDSDDTSEHSMPGNLPLPSSLSVDTRLTRSPKPSKYNFYVDLDPSLDSAQRIAILQQKLQEIRKTYADVKAELAAVERRRKKLRRREREVLNG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00152039; iTF_00001751;
90% Identity
-
80% Identity
-