Acer024850.2
Basic Information
- Insect
- Abscondita cerata
- Gene Symbol
- stc
- Assembly
- GCA_030710515.1
- Location
- JALBCR010000667.1:220771-234746[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 2.7 8.6e+04 -4.0 1.6 15 19 259 263 258 263 0.81 2 14 0.22 7.2e+03 -0.5 0.2 4 10 292 298 291 301 0.94 3 14 2.4e-06 0.078 15.4 13.0 1 19 305 322 305 322 0.93 4 14 1.1 3.6e+04 -2.8 2.1 5 10 347 352 347 352 0.93 5 14 2.2e-07 0.0071 18.7 10.6 1 18 358 375 358 376 0.93 6 14 3.8e-09 0.00012 24.3 14.3 1 19 416 434 416 434 0.98 7 14 2.6e-05 0.84 12.0 14.1 4 19 481 496 474 496 0.87 8 14 1.8 5.7e+04 -3.4 2.0 5 10 525 530 525 530 0.93 9 14 0.00043 14 8.2 7.8 1 11 536 546 536 548 0.96 10 14 1.7 5.4e+04 -3.3 0.8 4 10 551 557 550 557 0.72 11 14 1.8e-09 5.9e-05 25.3 12.1 1 19 563 581 563 581 0.98 12 14 0.00028 9.1 8.7 9.0 10 19 628 637 626 637 0.91 13 14 1.5e-07 0.0048 19.2 18.5 1 18 673 691 673 695 0.96 14 14 0.0034 1.1e+02 5.3 17.0 1 18 702 720 702 721 0.93
Sequence Information
- Coding Sequence
- ATGTCCTATTTGGGGCACAACTCCCAACAAAGACCTTTTTACGAAGGTCCTAATCAGTACAGcaacaattacaataattctCCACGCAATGCAACCATATCCCATTATAACAATTCACATAACTTTTCAAGTCGTTATTGTGAACCAGTTGCTACAGCTAATGCCCATTCAGGTTCGAGCTCTTCTTCCACCATAAACCCACAGAACGGATCTGAGTTCCCATATTATGATGACCAATCTTATTCGCAAACGATGGTATTTGAATCTAAGTTAACACCTCTAGCGAATGAATTTAAACCTGGTAGTAGTATGCATGCAACAATAGAAAGTGATCCGAGAAACCAAGGAGCAATTAGAAAagattatcaacaaaaaaacaaacgttttaatAATGATAAGAGATATAACAATGGAGAAAATCTGTACAGTAGGAATAGAACATTTTATCCGAATCAACGTAACAACTATAACAATCCAAAGCTTTTCAATGTAAAATCGGGTAAGCCTAGCGGTTATTACAAAGCTAACAATAGCAGAAGCTatagaaatacaaataaacaggATTATTACGATTATGAGAATAGAATGGATGCTGCTTCTCAAAGAGAACGTCTAGAGCAATTGATAATACGTCGTTTGCTAGAATGTCTTGTTTGTTGTGAAAAACTTCGTCATACAGATCAAGTATGGTCGTGCAAACAATGTTATcatgtgttacatttgaattGTACCATTCGTTGGGCACAATCGTCGAAATTGGAGTCTGGATGGAGATGTCCTGCATGTCAGAACGTGTACCAAGATGTACCCAAATCGTATCGCTGTTATTGCGAAAAACAAACTAATCCGACGTTAGATCCGAGTGGGATACCCCATAGCTGTGGAGCGGTTTGCGGTCGTAAAGGTCGTTCGTGTTCCCATAATTGTACGTTGATATGTCATCCCGGCCCTTGTCCCGATTGTTCTATAATGGTACCGAAATGTTGTGGATGTGGAGCCACAAAACCAATTGTTAAATGTAGTTCTACTGTTCCTATAACATGTCAACAATCGTGTAACAAAGTTCTCAACTGTGATATACACGTGTGTAACAGTAAATGTCACGAAGGCGATTGTCAGCCCTGCGCGAACGTGTTGAAACAGGAATGCTATTGTGGCAAGGAAGGGCGTAAGGAGAGTTGCACGAAAGAGGCAAATGGAGATTTGCGTTACGAATGTGGAGAACAATGCGACAAGTTGCTGTCTTGCGGAAATCACAGGTGCGAGCGCGAGTGTCACAGTGGACCATGCAATACTTGTTCTAAATCCCCCAATTTAATCCGTACATGTCCTTGTGGACAAAAAGATTTGGTACAAGTAAGAAACTCGTGCCTTGATCCGATTCCTTGCTGTGATAAAATGtgctcaaaaaaattgaattgtggTCAACCTAGCGCCCCTCATATATGTAAGTCTTCTTGTCACCAGGGAGCGTGTCCACCGTGCCCCGAAACAACTTTAATTCGGTGCCGTTGCGGTCATATGGACAAAGAAATTTTGTGTACCGAACTTACCTCTAAAGCTGATGACGCTCGCTGTGAGAAAAAGTGTGTTAGGAAACGATTATGTGGAAAACACAAGTGCAATCAATTGTGCTGTATCGAAATCGATCACGTTTGTCCTTTACCTTGCAACCGACCACTTTCTTGCGGTCTTCACAGATGCGTCGAGCCCTGCCACAAAGGAAGATGCCAACCTTGTTGGCGCACCAGTTTCGATGAGTTATATTGTGAATGTGGATCCAGTGTTCTGTATCCCCCGGTTGCGTGCGGCACTAGACCACCACCGTGCGATCAGATATGTTCTCGAAGTCGTCCGTGTGAACACGACGCTCTTCATTCGTGTCATTCTGGTCAATGTCCACCATGTACCGTTCTAACCAAACGTTGGTGCCACGGGAAACACGAACAGCGAGCGACCATTCCATGTCATCAAAACACTTTTAGTTGCGGTCTACCCTGTGGAAAAGACATGGCTTGCGGTAAACACAAATGCCAACAGCCATGTCATGAAGGATCTTGTCGCATGCCTTGCAATCAACCATGTAACGAAGTTCGAAACGAGTGCGGTCACCCTTGCAGCCAACCTTGTCACTCGCCTCCGTGTCCAGAAACGTCTTGCAAGCAAGCGGTACAAGTCACTTGTCCATGTGGTTTGCGTAAAAGTACTCGTGTTTGTATTGAATTGGCCGCAGAGTACCAAATTATGGACATGTCGCAAATAGCTTCCAAAATGGAACAAATGCAAATGGGTCAAAGGGTTGACATCACCGATCTAGGTATCCATAGAAAAGGACCTCTTAAAACattGGATTGCAACGACGAATGCCGTTTAGTCGAACGTAATCGTAGACTAGCAATAGGACTTCAAATTCGAAATCCGGATTTGAGCTCTAAGTTAACACCCAGATATTCAGAATACATGCGCAATTGGGCTAAAAAGGATCCCAAATTCTGCCAACAAATACACGAGAGGCTGACAGAATTAGTACAATTGGCGAAACAGAGTAAACAAAAAAGTAGAGCCTATTCTTTCGAAACTATGAATCGCGATAAACGTCATTTTGTTCATGAATATTGTGAACATTTCGGATGTGACAGCGCCGCTTACGATCCAGAACCAAACAGAAACGTGGTCGCAACGGCTTACAAAGACAAATCTTGGTTGCCCAGTTACAGTTTACTTGAAATCATTCAAAGAGAAAGCGGACAAAGAAAAGTTCCCGGTCCGCAACAGCTCGGTAAAGGACTCACGGCGAAAGTAGAAACTGTATCCCTAAAATTGCCGGGTCGTATTCCCCGACCTGCCACACCTCCAGGTGAATATgtagattattttaataatcctCCGGaatag
- Protein Sequence
- MSYLGHNSQQRPFYEGPNQYSNNYNNSPRNATISHYNNSHNFSSRYCEPVATANAHSGSSSSSTINPQNGSEFPYYDDQSYSQTMVFESKLTPLANEFKPGSSMHATIESDPRNQGAIRKDYQQKNKRFNNDKRYNNGENLYSRNRTFYPNQRNNYNNPKLFNVKSGKPSGYYKANNSRSYRNTNKQDYYDYENRMDAASQRERLEQLIIRRLLECLVCCEKLRHTDQVWSCKQCYHVLHLNCTIRWAQSSKLESGWRCPACQNVYQDVPKSYRCYCEKQTNPTLDPSGIPHSCGAVCGRKGRSCSHNCTLICHPGPCPDCSIMVPKCCGCGATKPIVKCSSTVPITCQQSCNKVLNCDIHVCNSKCHEGDCQPCANVLKQECYCGKEGRKESCTKEANGDLRYECGEQCDKLLSCGNHRCERECHSGPCNTCSKSPNLIRTCPCGQKDLVQVRNSCLDPIPCCDKMCSKKLNCGQPSAPHICKSSCHQGACPPCPETTLIRCRCGHMDKEILCTELTSKADDARCEKKCVRKRLCGKHKCNQLCCIEIDHVCPLPCNRPLSCGLHRCVEPCHKGRCQPCWRTSFDELYCECGSSVLYPPVACGTRPPPCDQICSRSRPCEHDALHSCHSGQCPPCTVLTKRWCHGKHEQRATIPCHQNTFSCGLPCGKDMACGKHKCQQPCHEGSCRMPCNQPCNEVRNECGHPCSQPCHSPPCPETSCKQAVQVTCPCGLRKSTRVCIELAAEYQIMDMSQIASKMEQMQMGQRVDITDLGIHRKGPLKTLDCNDECRLVERNRRLAIGLQIRNPDLSSKLTPRYSEYMRNWAKKDPKFCQQIHERLTELVQLAKQSKQKSRAYSFETMNRDKRHFVHEYCEHFGCDSAAYDPEPNRNVVATAYKDKSWLPSYSLLEIIQRESGQRKVPGPQQLGKGLTAKVETVSLKLPGRIPRPATPPGEYVDYFNNPPE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00004356;
- 90% Identity
- -
- 80% Identity
- -