Basic Information

Insect: Abscondita cerata
Gene Symbol: -
Assembly: GCA_030710515.1
Location: JALBCR010003380.1:87099-89030[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0045 1.5 11.7 2.0 1 23 135 157 135 157 0.97

2 18 0.0075 2.6 11.0 1.5 1 22 159 180 159 180 0.94

3 18 0.0026 0.89 12.4 2.1 2 23 187 209 186 209 0.96

4 18 0.00027 0.092 15.5 5.3 1 23 216 238 216 238 0.98

5 18 0.0003 0.1 15.4 4.1 1 23 244 266 244 266 0.99

6 18 0.00021 0.074 15.8 2.1 1 23 272 294 272 294 0.99

7 18 0.0015 0.5 13.2 1.4 2 23 312 333 311 333 0.97

8 18 0.00017 0.06 16.1 6.6 1 23 339 361 339 361 0.98

9 18 4.2e-06 0.0015 21.2 1.4 1 23 367 389 367 389 0.99

10 18 0.00028 0.096 15.5 2.7 1 23 395 417 395 417 0.98

11 18 0.036 12 8.8 1.4 1 23 423 445 423 445 0.98

12 18 0.0091 3.1 10.7 5.6 1 23 451 473 451 473 0.98

13 18 0.0044 1.5 11.7 2.2 1 23 479 501 479 501 0.98

14 18 0.00019 0.065 16.0 4.1 1 23 507 529 507 529 0.98

15 18 0.0012 0.41 13.5 2.8 1 23 535 557 535 557 0.98

16 18 0.0046 1.6 11.7 3.3 1 23 563 585 563 585 0.98

17 18 0.00025 0.087 15.6 0.4 1 23 591 613 591 613 0.99

18 18 0.084 29 7.7 0.3 1 23 619 641 619 641 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0045	1.5	11.7	2.0	1	23	135	157	135	157	0.97
2	18	0.0075	2.6	11.0	1.5	1	22	159	180	159	180	0.94
3	18	0.0026	0.89	12.4	2.1	2	23	187	209	186	209	0.96
4	18	0.00027	0.092	15.5	5.3	1	23	216	238	216	238	0.98
5	18	0.0003	0.1	15.4	4.1	1	23	244	266	244	266	0.99
6	18	0.00021	0.074	15.8	2.1	1	23	272	294	272	294	0.99
7	18	0.0015	0.5	13.2	1.4	2	23	312	333	311	333	0.97
8	18	0.00017	0.06	16.1	6.6	1	23	339	361	339	361	0.98
9	18	4.2e-06	0.0015	21.2	1.4	1	23	367	389	367	389	0.99
10	18	0.00028	0.096	15.5	2.7	1	23	395	417	395	417	0.98
11	18	0.036	12	8.8	1.4	1	23	423	445	423	445	0.98
12	18	0.0091	3.1	10.7	5.6	1	23	451	473	451	473	0.98
13	18	0.0044	1.5	11.7	2.2	1	23	479	501	479	501	0.98
14	18	0.00019	0.065	16.0	4.1	1	23	507	529	507	529	0.98
15	18	0.0012	0.41	13.5	2.8	1	23	535	557	535	557	0.98
16	18	0.0046	1.6	11.7	3.3	1	23	563	585	563	585	0.98
17	18	0.00025	0.087	15.6	0.4	1	23	591	613	591	613	0.99
18	18	0.084	29	7.7	0.3	1	23	619	641	619	641	0.97

Sequence Information

Coding Sequence: ATGAATGCGGCAGACAGTACGAGAACAACAACATGCAGTATTTGTTTAAGGGAAATAACGGAAGTTGCTGGATTTCATCCtttaaatgacgatttaatgaTGCACTCAAAACTGTTGAACCTTCCTGAGGAAGTCGTAGGTATCATAAGTGGTTTCGGTTTTTTATACATGTTTATTATGTTCAAGGATTTGAGCATCGTCGAGAACCCAGTTGCGTGCCACAAATGCAAGATTGAAATCGATGAAATACATCAATTGTGCATGAAAAACGAATGCTCATTAAAAAACGAAAGTTCTAACACTTCATCTCTTGTTAAAGAAGAACGTCTCACAGATCAAATTAAGGAAGAATTCGTCAAAACTGAGGAAGTTATCAAAGAATCTGAGTTGACTAGcatttattattactgttaCCACTGCAGATACAGCACAGACAGCAAACCGAATCTAATTGATCACATTTTCATTCATcgttttaaatgtaattcaTGCGATTTCACAACTTCCAACAATTTCTCACTAATAAATCATTCGAAGACGTGTTCGAAGAAAACAATAAAGTGCAAAGAGTGTGAATTTTCCACTTTTGACAGAAAGAATTTAAAGACACATGTTAATCGAACGCATAACAGAAAATCGTTGAAACATAAATGTAAGGTGTGTAATTTTTCGTGTTCCAGCAAGCAATCATTAATAATACATGTTCGTACGCACACTggagaaaaaccatttaaatgcaacTTGTGCGATTATAGCAGTAATCGATTGCATACTTTGAAAGTACATTTGAAGCGACATTTTTACGAGTGGCCTTTTAAATgcgataagtgcgactacaacaCCTACCTTAAATCTTTATTGGAAAAACATCAACTAACCCACACCGAAGCAAGTAGACAACCAAAATCGCGTATGTATATACATTCTGACGTTAAATGCGATGAGTGTGATTACAAAACTTCCTCCAAAAGTTTGATGGTGCGTCACAAAACTCGCCACgccaaagaaaaattgtttaaatgcgATGTATGTGAGTATTCTTGTAATCAATTGCACAACTTAAAAAGACATATGTATAAGCACTCTGGTGAGTGGCCTTACAGTTGTGAccaatgcgactacaaaacctCCGACGAATCTTACTTGAAGCAACACATTCGAACGCACACGGATgcaaaaccatttaaatgcaacTTGTGTGAATATCGCTGTAGACAACCTGTGGCCTTGAAAGAACACATGTATAAACACTCTGGTGAATGGCCCTTCAGGTGTGACTTATGCAATTACAGAACTGCTCACGGCGGCAAACTTGTGATGCATAAAAGGGTGCACACCAAAGAGAAACCATTTAAATGCGATTTTTGCGAGTATTGCACCAATGTAtcgaatacattaaaaaagCATATGTATAAGCATTCTGGTGAGTGGCCTTATAGTTGCGAccaatgcgacttcaaaacatcGTACGAATATTCTTTGAAGCAACACAATCTAACTCACAGCAATAAAAACCCATTTAAATGTGACTTGTGCGGATATCGTTGTAAGCAATTGATGGGCTTGAAAAGGCACATGTATAAACACTCTGGTGAATGGCCTTACAGTTGCAACAGATGCGGCTATAAAACTTCTTCCGAATTTACTTTAAAGCAGCACAAATTAACGCACACCAgtgaaaaaccgtttaaatgcgATTTGTGTGAATATCGCTGTAAGAAATTGGTTGCGTTGAAAGAGCATATGTATAAACACACTGGTCAATGGCCCTATAGATGCGATGCGTGCGATTACAAAACTGCCCGCAGCGGCCAACTTGAGCAACATAAAAGGGTTCATACAAGAGAAAAACCTTTCGAGTGCTATCTGTGTGGTTCCAAATTTAATTGGAAAAGTAATTTGGTGCCACATCTCAAGATTCATAAGCGTTAA
Protein Sequence: MNAADSTRTTTCSICLREITEVAGFHPLNDDLMMHSKLLNLPEEVVGIISGFGFLYMFIMFKDLSIVENPVACHKCKIEIDEIHQLCMKNECSLKNESSNTSSLVKEERLTDQIKEEFVKTEEVIKESELTSIYYYCYHCRYSTDSKPNLIDHIFIHRFKCNSCDFTTSNNFSLINHSKTCSKKTIKCKECEFSTFDRKNLKTHVNRTHNRKSLKHKCKVCNFSCSSKQSLIIHVRTHTGEKPFKCNLCDYSSNRLHTLKVHLKRHFYEWPFKCDKCDYNTYLKSLLEKHQLTHTEASRQPKSRMYIHSDVKCDECDYKTSSKSLMVRHKTRHAKEKLFKCDVCEYSCNQLHNLKRHMYKHSGEWPYSCDQCDYKTSDESYLKQHIRTHTDAKPFKCNLCEYRCRQPVALKEHMYKHSGEWPFRCDLCNYRTAHGGKLVMHKRVHTKEKPFKCDFCEYCTNVSNTLKKHMYKHSGEWPYSCDQCDFKTSYEYSLKQHNLTHSNKNPFKCDLCGYRCKQLMGLKRHMYKHSGEWPYSCNRCGYKTSSEFTLKQHKLTHTSEKPFKCDLCEYRCKKLVALKEHMYKHTGQWPYRCDACDYKTARSGQLEQHKRVHTREKPFECYLCGSKFNWKSNLVPHLKIHKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -