Basic Information

Insect: Abscondita cerata
Gene Symbol: -
Assembly: GCA_030710515.1
Location: JALBCR010002553.1:192433-197070[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 0.015 5.2 10.0 2.3 1 23 10 33 10 33 0.95

2 29 2.6e-07 9.1e-05 25.0 1.0 1 23 39 61 39 61 0.98

3 29 0.00066 0.23 14.3 0.0 3 23 69 90 68 90 0.96

4 29 0.00016 0.055 16.2 1.4 1 23 95 117 95 117 0.98

5 29 0.00045 0.16 14.8 2.2 1 23 127 149 127 149 0.98

6 29 1.7 6e+02 3.5 0.9 1 23 155 177 155 177 0.91

7 29 7.3e-06 0.0025 20.5 1.9 1 23 183 205 183 205 0.99

8 29 1.1e-07 3.8e-05 26.2 0.3 1 23 211 233 211 233 0.99

9 29 0.082 28 7.7 0.6 1 21 239 259 239 260 0.94

10 29 0.00023 0.078 15.8 0.4 1 20 270 289 270 290 0.96

11 29 0.0002 0.068 16.0 2.0 1 23 298 321 298 321 0.96

12 29 0.0077 2.7 10.9 1.7 1 23 327 349 327 349 0.98

13 29 0.0005 0.17 14.7 0.1 2 23 356 378 355 378 0.95

14 29 6.6e-05 0.023 17.4 0.4 1 23 383 405 383 405 0.98

15 29 0.00011 0.039 16.7 6.3 1 23 415 437 415 437 0.99

16 29 0.00018 0.063 16.0 5.8 3 23 445 465 443 465 0.96

17 29 1.8e-05 0.006 19.3 0.4 1 23 471 493 471 493 0.98

18 29 6.2e-07 0.00021 23.8 0.2 1 23 499 521 499 521 0.99

19 29 5.6e-06 0.0019 20.8 1.0 1 23 527 550 527 550 0.97

20 29 1.8e-05 0.0061 19.3 1.8 2 23 561 582 560 582 0.98

21 29 2.5e-06 0.00086 21.9 1.6 1 23 588 611 588 611 0.97

22 29 0.0011 0.39 13.6 3.4 1 23 617 639 617 639 0.97

23 29 0.00054 0.19 14.6 2.7 2 23 646 668 645 668 0.95

24 29 5.5e-06 0.0019 20.8 0.2 1 23 673 695 673 695 0.99

25 29 0.0011 0.38 13.6 1.8 1 23 705 727 705 727 0.98

26 29 1.9e-06 0.00066 22.3 0.1 1 23 732 754 732 754 0.98

27 29 7.5e-05 0.026 17.3 4.1 1 23 760 782 760 782 0.98

28 29 1.6e-06 0.00056 22.5 1.3 1 23 788 810 788 810 0.98

29 29 0.014 4.9 10.1 0.5 1 23 816 839 816 839 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	0.015	5.2	10.0	2.3	1	23	10	33	10	33	0.95
2	29	2.6e-07	9.1e-05	25.0	1.0	1	23	39	61	39	61	0.98
3	29	0.00066	0.23	14.3	0.0	3	23	69	90	68	90	0.96
4	29	0.00016	0.055	16.2	1.4	1	23	95	117	95	117	0.98
5	29	0.00045	0.16	14.8	2.2	1	23	127	149	127	149	0.98
6	29	1.7	6e+02	3.5	0.9	1	23	155	177	155	177	0.91
7	29	7.3e-06	0.0025	20.5	1.9	1	23	183	205	183	205	0.99
8	29	1.1e-07	3.8e-05	26.2	0.3	1	23	211	233	211	233	0.99
9	29	0.082	28	7.7	0.6	1	21	239	259	239	260	0.94
10	29	0.00023	0.078	15.8	0.4	1	20	270	289	270	290	0.96
11	29	0.0002	0.068	16.0	2.0	1	23	298	321	298	321	0.96
12	29	0.0077	2.7	10.9	1.7	1	23	327	349	327	349	0.98
13	29	0.0005	0.17	14.7	0.1	2	23	356	378	355	378	0.95
14	29	6.6e-05	0.023	17.4	0.4	1	23	383	405	383	405	0.98
15	29	0.00011	0.039	16.7	6.3	1	23	415	437	415	437	0.99
16	29	0.00018	0.063	16.0	5.8	3	23	445	465	443	465	0.96
17	29	1.8e-05	0.006	19.3	0.4	1	23	471	493	471	493	0.98
18	29	6.2e-07	0.00021	23.8	0.2	1	23	499	521	499	521	0.99
19	29	5.6e-06	0.0019	20.8	1.0	1	23	527	550	527	550	0.97
20	29	1.8e-05	0.0061	19.3	1.8	2	23	561	582	560	582	0.98
21	29	2.5e-06	0.00086	21.9	1.6	1	23	588	611	588	611	0.97
22	29	0.0011	0.39	13.6	3.4	1	23	617	639	617	639	0.97
23	29	0.00054	0.19	14.6	2.7	2	23	646	668	645	668	0.95
24	29	5.5e-06	0.0019	20.8	0.2	1	23	673	695	673	695	0.99
25	29	0.0011	0.38	13.6	1.8	1	23	705	727	705	727	0.98
26	29	1.9e-06	0.00066	22.3	0.1	1	23	732	754	732	754	0.98
27	29	7.5e-05	0.026	17.3	4.1	1	23	760	782	760	782	0.98
28	29	1.6e-06	0.00056	22.5	1.3	1	23	788	810	788	810	0.98
29	29	0.014	4.9	10.1	0.5	1	23	816	839	816	839	0.98

Sequence Information

Coding Sequence: ATGGTCTGCCACAGTGACAAAAAACCGTATTCGTGCGATGTGTGCCCAAAAGGTTTTTCTCGATTTTATGTCGTCGAGCTTCATAAAAAAAGGTGTCACTTAAATACCGAAACTTACGAATGCGGAACGTGTGGTCGTAAGTTTAAAACAAAGGATGGACTACGTAGACACATACTACGACATGTTAAGCAGTTTTCCCAGCTTTGTCCGTTTTGCAACAAAGGTTTTTATGGGGCTTCAGAACTGAAGTTACACATTGCGATAGCGCACGTTGGGGTGGCATATGAATGCGAAGTTTGTAAAAAACCTTTGAAGCACAAGAGATCTTTGATATATCACATGGCGAGTCACAGCGATAAGTACTTTTCGGAAAAGACCTTTAAGTGTACTGTATGTGACAAAGCGTTACATATGAAAACTTCTTTAAATCGACACGTTAAAATACACGGCAgggaaaaattgtatttgtgcCACTTGTGCGGCCAacaatatttgtacaaaaaaccATTAGATGAACATTTGCTGATGCATTACAATCAAAAACCATTTCAATGCAAAGTCTGCAATAAAAGTTTCCATAAAGCTGTAAATTTGGACGTTCACATACGTTCGCACACAGGCGTGAAACCGTACACGTGCGACGTCTGTGGGAAAACATTTGCTCAAAGACCTTCTTTAAACACCCACATGAATATACACACTGGAGAAAAAGCGTACAAGTGCAGTTtgtgtgaaaatttttttgctactAGAGGTTTAGCGAAAAAGCATGAGAAAAGgctTACCTACCTTAACCTCTACAATTATCACCAGTGTACCGTTTGTTGGAAAACTTTTACAAGAGGTGAAGGTTTGAGAAAACACTTAGTTTGTCACAGTGGTGAAAAACTGTACCCTTGCGACGTGTgccaaaaacgtttttcttacGCCTCTTCAGTCAAAGTCCACAGAGAAAGATGTCACAGTGCACACGAAGGTTACGAATGCGAAACTTGTGGTCAAAGACTTAAGCTAAAAACCCAATTGCATTTGCACGTACTTCGACATATGAAGCAGTACACAGATTACTGCCCGGCTTGCAACAAAGGTTTTTACAATGCGGCAGAAATGAGAAGACACATAAGCAAAGTGCACGACGAAGTTGTTCACGAGTGCAAAATCTGCGGGAAACCTTTGAAAAACTTACAATCTTTAGAGGGTCATATGGACACTCACAGTGATGGGTACTcatcaaaaaagaaatttaagtgCACCCGGTGCGACAAAGCTTTTCACTTTAAAAGCTCGTTGAATAGACACTCAAAAACCCACAGCAGTAGTAATTTGCACCTGTGCCACGTGTGCGgcaaaaaatattcttacaaaCAGCATTTGGAAGAACATTTGCTGACGCATAGCGAACAAAAACCGTTTCAATGCGAAGTATGTAACAAAGGTTTTgccaaaattacaaatttacgCGTTCACGAACGTTCTCACACCGGCGTAAAACCATACAAGTGCGAAATGTGCGGAAAAGCTTTTACTCAAAAACCTCCATTGGTGGTACACATGAGATATCACACCGGAGAGAAACCGTATAAGTGTAGTTTGTGCGGAAAGGCGTTCGTTAccaaaagtttaatgaaaattcaCGAAAAAAGCAAACATGACGTTTTGCGCTGCCAGGATCACCAAAAGCAGTGTGACATCTGTTTAAAAATCTTTtccaaaaagaaatatttgacGAACCATATGCTGACGCACTCTAATGCAAAACCATTTCAATGCGAGTTATGTTCAAAAAGCTTTAAGACAAAGTTTAGCCTTTCTGTGCACATAAGAAATGTGCACCAAACCAGAAAAACGTACCACTGCGATGTTTGTGACAAAACGTTCGCGTATGAAAGGtcttataaaattcataacaaACGCCACATTAATCAATACATCATCCACTGCACCGTTTGCAATAAAGGTTTTTACTCCAACAATGAACTAAAACATCACGTATTGAGAGTGCACGACAAGGTGGCGTACGAGTGCAAAATCTGCGGGAAACCTTTGTCATCTAAATCATCTATGGAAGGGCATATGAATAGACACAGTAAGACTTACACAGACGACAAGAAATACAAATGTAATTTGTGCGAAAAATCTTTCTACTGGAGGAGGTCTTTAGCTCGTCATACAAAGTGGCACGCTGGAGAAAAGTTCGTTTGTCATATTTGTGGAAAGTCTGTCGCAACTAAGGCCAGTTTAAATGAGCATATACTTATTCACAACAAAGTGAAACCTCACAAATGCGAACACTGCGAAAAAAGGTTTACTAAAATGGTCAATTTAAAGGTGCATCTTCTTATTCATTCGGGCGTGAAGCCGCATCAGTGTGAAATTTGCGGAAAATCGTTTAATCAAAGACCTTCGTTGGTCATTCACAAACGGAGTCATACGGGAGAGAGACCTTACAAATGCGATCTGTGCGAAGGCGCGTTTGTGAGTAGGAATGTGTTAAACCTGCATAGAAAAAGGAAGCATTGCTTATTGTCATGTTTAgttgtacaatattttcaataa
Protein Sequence: MVCHSDKKPYSCDVCPKGFSRFYVVELHKKRCHLNTETYECGTCGRKFKTKDGLRRHILRHVKQFSQLCPFCNKGFYGASELKLHIAIAHVGVAYECEVCKKPLKHKRSLIYHMASHSDKYFSEKTFKCTVCDKALHMKTSLNRHVKIHGREKLYLCHLCGQQYLYKKPLDEHLLMHYNQKPFQCKVCNKSFHKAVNLDVHIRSHTGVKPYTCDVCGKTFAQRPSLNTHMNIHTGEKAYKCSLCENFFATRGLAKKHEKRLTYLNLYNYHQCTVCWKTFTRGEGLRKHLVCHSGEKLYPCDVCQKRFSYASSVKVHRERCHSAHEGYECETCGQRLKLKTQLHLHVLRHMKQYTDYCPACNKGFYNAAEMRRHISKVHDEVVHECKICGKPLKNLQSLEGHMDTHSDGYSSKKKFKCTRCDKAFHFKSSLNRHSKTHSSSNLHLCHVCGKKYSYKQHLEEHLLTHSEQKPFQCEVCNKGFAKITNLRVHERSHTGVKPYKCEMCGKAFTQKPPLVVHMRYHTGEKPYKCSLCGKAFVTKSLMKIHEKSKHDVLRCQDHQKQCDICLKIFSKKKYLTNHMLTHSNAKPFQCELCSKSFKTKFSLSVHIRNVHQTRKTYHCDVCDKTFAYERSYKIHNKRHINQYIIHCTVCNKGFYSNNELKHHVLRVHDKVAYECKICGKPLSSKSSMEGHMNRHSKTYTDDKKYKCNLCEKSFYWRRSLARHTKWHAGEKFVCHICGKSVATKASLNEHILIHNKVKPHKCEHCEKRFTKMVNLKVHLLIHSGVKPHQCEICGKSFNQRPSLVIHKRSHTGERPYKCDLCEGAFVSRNVLNLHRKRKHCLLSCLVVQYFQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -