Basic Information

Gene Symbol
-
Assembly
GCA_030710515.1
Location
JALBCR010004263.1:651982-663115[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.61 3.9e+03 0.4 0.0 33 46 235 248 222 248 0.79
2 6 9.6e-08 0.00061 22.2 0.1 3 36 256 291 254 301 0.90
3 6 3.7e-08 0.00024 23.5 0.0 3 46 309 356 307 356 0.95
4 6 5.2e-10 3.3e-06 29.4 0.0 1 46 363 408 363 408 0.96
5 6 5.5e-08 0.00035 22.9 0.1 2 45 416 459 416 460 0.93
6 6 5.7 3.7e+04 -2.7 0.0 36 45 640 649 639 650 0.84

Sequence Information

Coding Sequence
ATGCGTTGGAACGCTGGGGAGCGTGCTTTTGCCGTTGTGGCCTACTTTTTGAGCGGATATTCTGTGATCGCAACCCAGCGCGCCTTTCGGAATCACTTTAATTTAACCCCGTTGGCCGCTGTCCCGGACCGGAAATCAATTGTTGCGTGGGTCACTACGTTTAGACAAACTGGAAGTGCGACAAGACGAAGAACTGGAGTCCCTCGGCCTATTAGAACACCTGACAACATTGAGACAGTAAGAGCTTCAGTGTTGCGATCACCACGGCGTTCTGCGCGCCAACATGCTGAATTCGAACCGATATGTACACATGCTACAGTATTTTTTTGCCCACGGCTAGATGATTTGGACTTAGGGGACATTTGGTTCCAACAAGACGGCGCAACGGCGCACACTTCAAGAGCATCGATGGCTATATTGAGAGAACACTTCCCGGGGCGCGTCATCTCAATTAGGGGCGATTTGGAGTGCCCGCTCACCCGATTTGACGTCTTGCgattttttctttggggttttTTAAATCCCGTGTATGTGAACCGTTCAAGGACCCTACAAGATTTGAAGACCAACATCCAGGAAGAAATTACCAACATAACGTCTGATATTCTTGCAAAAGTTACGACAAACGCCAGACATCGGTTTACTCAGTGTATGGAAAATGGGGGACGTCACCTACCTGATATGAtctatgtaaataaaattagGACGGCGATCGAATGTAAGGCAATGTGGAACGTTTACCTACACCCTGACATAAACACAAGCGAGTGGACGGACGAGGAGAACAAAACTATCAAATTATTAGCGAGAAGGCACAACGCACAAAATTGGGATTTAATCGCATCCGAATTAAACACGAACCGATCTGGTTATCTCGTGTTTTACCAGTATCATTCGACCCTGCGTCAAAAGTTTAGGAACGAACGTTTTCAAGTGAGCGAAGATGAGTTCCTTTTGGAGGTCGTCGACAAATGCAGCATCGGGAACTTCATACCTTGGCGTAAAGTTGCGTCGTTCTTTCAAGACAGAtccaaacaacaattgtatcACAGGTACAAATATTACCTCTCCCATGGTAACGTCGTCAAAGGTACTTTTACCGAAGCCGAAGATATTTTGATCGTGTATCTCGTCGGAAAATTTGGACGGGATTATTCCAGATGTGCTACATATCTTTCGACTCGTACTAGTGTTCAAATACGTAATCGATACACAGGTTACCTGGATAAATTGTTTGTCAATTTGGGTCAGTATAGTAAGGCGGAGGATCTAAGAATACTAGATCACGTTAGAGTTCACGGAACTAAGGATTGGAAGACGCTGAGTGTCGAATTAAAACGAGGCCGCTCACACGTCAGACAACGTTATTTGACTTTGCAAAAGTGGTTGCAGATGCCATCCCACATGGTGAAAAATTTGCAGAGTCGTAAGTTGCAAGTACGGTCTAAGCAAACGAAGGAAAGATACAAGCGGTTACATGATATCATAGAGGAATTGAATTCGTATAACGGTGAAGTTAACTTAGACGTTGTTCATAGTTTTATAAAGAAGGTCGATGAACAATATTCAACGTTAAAACCATGGCGCTTGATgaaaaaatcgagttttgtCGATAATCAGCTCATAGGTTTCTTTAAAGGCACTTGCAACATTCAAAGAGAATACAAGACCCATAACGAACAAAGTATTTTGGTATCGGCAACGCGCGTTGTtcaaatgttagatttatttgaaattcctTCGAATTCGGTGCAAATATTACCAAACCTCAGCGAAAGGGACCTTTTAGTGATGAATGTGTTGATGGGAACAACTGAAAGGAAACCGAGTTTTGAATCCTTTACACCTCAGATCCGTTTTAGATTACCACCAACTTTGAATACGATGTTAGGCTTACGCGGTATTATAGTCAAATCCGAAATGATTAGGAATTTCTATTATACAATCCGCAGCGTAGTCGCAGAAATAATCGAAAATGATCTACAGAAACCGGACGCAAAGAGGACGTGTAACATCCTGGCACAAAGGCGGAATTTCTTCGTAAGATTCTACACTTTATTCAATTGGCCTTCGATAATTTCGAAATCTTTTCCGGACAAGCTCAAAAAAGCCGAAAGTGACGGCTTCGAAATCGAATCGCCACAAAGATAA
Protein Sequence
MRWNAGERAFAVVAYFLSGYSVIATQRAFRNHFNLTPLAAVPDRKSIVAWVTTFRQTGSATRRRTGVPRPIRTPDNIETVRASVLRSPRRSARQHAEFEPICTHATVFFCPRLDDLDLGDIWFQQDGATAHTSRASMAILREHFPGRVISIRGDLECPLTRFDVLRFFLWGFLNPVYVNRSRTLQDLKTNIQEEITNITSDILAKVTTNARHRFTQCMENGGRHLPDMIYVNKIRTAIECKAMWNVYLHPDINTSEWTDEENKTIKLLARRHNAQNWDLIASELNTNRSGYLVFYQYHSTLRQKFRNERFQVSEDEFLLEVVDKCSIGNFIPWRKVASFFQDRSKQQLYHRYKYYLSHGNVVKGTFTEAEDILIVYLVGKFGRDYSRCATYLSTRTSVQIRNRYTGYLDKLFVNLGQYSKAEDLRILDHVRVHGTKDWKTLSVELKRGRSHVRQRYLTLQKWLQMPSHMVKNLQSRKLQVRSKQTKERYKRLHDIIEELNSYNGEVNLDVVHSFIKKVDEQYSTLKPWRLMKKSSFVDNQLIGFFKGTCNIQREYKTHNEQSILVSATRVVQMLDLFEIPSNSVQILPNLSERDLLVMNVLMGTTERKPSFESFTPQIRFRLPPTLNTMLGLRGIIVKSEMIRNFYYTIRSVVAEIIENDLQKPDAKRTCNILAQRRNFFVRFYTLFNWPSIISKSFPDKLKKAESDGFEIESPQR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-